RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 A4D1N5 150 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 A6NDN8 102 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-235ENST00000495515 PRLHP81277 87 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 TAL2Q16559 108 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 UQCR10Q9UDW1 63 aa10.38□□□□□ -0.75
HDAC6-235ENST00000495515 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-235ENST00000495515 ZNF73O43830 326 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-235ENST00000495515 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-235ENST00000495515 LOC105371267A0A1B0GV96 52 aa10.35□□□□□ -0.75
HDAC6-235ENST00000495515 KRTAP4-16G5E9R7 235 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-235ENST00000495515 HIGD2AQ9BW72 106 aa10.34□□□□□ -0.75
HDAC6-235ENST00000495515 B5MCH6 92 aa10.33□□□□□ -0.76
HDAC6-235ENST00000495515 J3QL48 77 aa10.33□□□□□ -0.76
HDAC6-235ENST00000495515 HERC1Q15751 4861 aa10.32□□□□□ -0.76
HDAC6-235ENST00000495515 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
HDAC6-235ENST00000495515 A6NJY4 79 aa10.32□□□□□ -0.76
HDAC6-235ENST00000495515 Q6ZRX8 168 aa10.32□□□□□ -0.76
HDAC6-235ENST00000495515 CEND1Q8N111 149 aa10.32□□□□□ -0.76
HDAC6-235ENST00000495515 HSD52Q0P140 79 aa10.31□□□□□ -0.76
HDAC6-235ENST00000495515 LINC01600Q96MT4 127 aa10.31□□□□□ -0.76
HDAC6-235ENST00000495515 C6orf99Q4VX62 202 aa10.3□□□□□ -0.76
HDAC6-235ENST00000495515 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
HDAC6-235ENST00000495515 C12orf57Q99622 126 aa10.29□□□□□ -0.76
HDAC6-235ENST00000495515 ZNF706Q9Y5V0 76 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-235ENST00000495515 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
HDAC6-235ENST00000495515 TRBV7-6A0A0J9YX20 115 aa10.28□□□□□ -0.76
HDAC6-235ENST00000495515 COX7BP24311 80 aa10.27□□□□□ -0.77
HDAC6-235ENST00000495515 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
HDAC6-235ENST00000495515 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.77
HDAC6-235ENST00000495515 PRO1933Q9H354 126 aa10.27□□□□□ -0.77
HDAC6-235ENST00000495515 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
HDAC6-235ENST00000495515 A0A0B4J2C4 111 aa10.26□□□□□ -0.77
HDAC6-235ENST00000495515 KRTAP1-4P0C5Y4 121 aa10.26□□□□□ -0.77
HDAC6-235ENST00000495515 SMIM11BQ8TCY0 68 aa10.26□□□□□ -0.77
HDAC6-235ENST00000495515 A0A1B0GWB2 263 aa10.25□□□□□ -0.77
HDAC6-235ENST00000495515 CFC1BP0CG36 223 aa10.25□□□□□ -0.77
HDAC6-235ENST00000495515 CFC1P0CG37 223 aa10.25□□□□□ -0.77
HDAC6-235ENST00000495515 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
HDAC6-235ENST00000495515 VAMP3Q15836 100 aa10.25□□□□□ -0.77
HDAC6-235ENST00000495515 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
HDAC6-235ENST00000495515 Q9BRP9 147 aa10.24□□□□□ -0.77
HDAC6-235ENST00000495515 TSTD3H0UI37 97 aa10.23□□□□□ -0.77
HDAC6-235ENST00000495515 FXYD2P54710 66 aa10.23□□□□□ -0.77
HDAC6-235ENST00000495515 CRYGAP11844 174 aa10.22□□□□□ -0.77
HDAC6-235ENST00000495515 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
HDAC6-235ENST00000495515 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
HDAC6-235ENST00000495515 PRR26Q8N8Z3 221 aa10.21□□□□□ -0.77
HDAC6-235ENST00000495515 H7C2G1 150 aa10.2□□□□□ -0.78
HDAC6-235ENST00000495515 MT1HL1P0DM35 61 aa10.2□□□□□ -0.78
HDAC6-235ENST00000495515 KRTAP10-8P60410 259 aa10.2□□□□□ -0.78
HDAC6-235ENST00000495515 NHP2Q9NX24 153 aaKnown RBP10.2□□□□□ -0.78
HDAC6-235ENST00000495515 PRO1854Q9UHT4 67 aa10.2□□□□□ -0.78
HDAC6-235ENST00000495515 ERC2-IT1O76042 136 aa10.19□□□□□ -0.78
HDAC6-235ENST00000495515 BVES-AS1Q5T3Y7 98 aa10.19□□□□□ -0.78
HDAC6-235ENST00000495515 SLC25A20O43772 301 aa10.18□□□□□ -0.78
HDAC6-235ENST00000495515 Q1RN00 199 aa10.18□□□□□ -0.78
HDAC6-235ENST00000495515 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
HDAC6-235ENST00000495515 ANAPC11Q9NYG5 84 aa10.17□□□□□ -0.78
HDAC6-235ENST00000495515 LRP1Q07954 4544 aaKnown RBP10.17□□□□□ -0.78
HDAC6-235ENST00000495515 M0R143 59 aa10.16□□□□□ -0.78
HDAC6-235ENST00000495515 CTAG1AP78358 180 aa10.15□□□□□ -0.78
HDAC6-235ENST00000495515 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.79
HDAC6-235ENST00000495515 A0A087X002 238 aa10.14□□□□□ -0.79
HDAC6-235ENST00000495515 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
HDAC6-235ENST00000495515 TYMSOSQ8TAI1 123 aa10.14□□□□□ -0.79
HDAC6-235ENST00000495515 H0YGX0 51 aa10.12□□□□□ -0.79
HDAC6-235ENST00000495515 SNCGO76070 127 aa10.12□□□□□ -0.79
HDAC6-235ENST00000495515 LINC00575Q6W349 94 aa10.12□□□□□ -0.79
HDAC6-235ENST00000495515 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
HDAC6-235ENST00000495515 K7ERJ3 54 aa10.11□□□□□ -0.79
HDAC6-235ENST00000495515 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
HDAC6-235ENST00000495515 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
HDAC6-235ENST00000495515 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
HDAC6-235ENST00000495515 SPRR1BP22528 89 aa10.08□□□□□ -0.8
HDAC6-235ENST00000495515 COX6CP09669 75 aa10.07□□□□□ -0.8
HDAC6-235ENST00000495515 PSMB2P49721 201 aa10.07□□□□□ -0.8
HDAC6-235ENST00000495515 DEFB105AQ8NG35 78 aa10.07□□□□□ -0.8
HDAC6-235ENST00000495515 C3orf22Q8N5N4 141 aa10.06□□□□□ -0.8
HDAC6-235ENST00000495515 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
HDAC6-235ENST00000495515 TRIAP1O43715 76 aa10.05□□□□□ -0.8
HDAC6-235ENST00000495515 TSPAN13O95857 204 aa10.05□□□□□ -0.8
HDAC6-235ENST00000495515 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
HDAC6-235ENST00000495515 IGLV9-49A0A0B4J1Y8 123 aa10.04□□□□□ -0.8
HDAC6-235ENST00000495515 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-235ENST00000495515 A0A1B0GX51 115 aa10.03□□□□□ -0.8
HDAC6-235ENST00000495515 Q6ZQY7 126 aa10.03□□□□□ -0.8
HDAC6-235ENST00000495515 MOBPQ13875 183 aa10.02□□□□□ -0.81
HDAC6-235ENST00000495515 C9orf153Q5TBE3 101 aa10.02□□□□□ -0.81
HDAC6-235ENST00000495515 SSBP3-AS1Q7Z2R9 100 aa10.02□□□□□ -0.81
HDAC6-235ENST00000495515 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
HDAC6-235ENST00000495515 GHRHP01286 108 aa10□□□□□ -0.81
HDAC6-235ENST00000495515 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
HDAC6-235ENST00000495515 BATFQ16520 125 aa10□□□□□ -0.81
HDAC6-235ENST00000495515 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
HDAC6-235ENST00000495515 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
HDAC6-235ENST00000495515 TNXBP22105 4242 aa9.99□□□□□ -0.81
HDAC6-235ENST00000495515 SCGB1C2P0DMR2 95 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms