RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.98
GPC1-209ENST00000495100 RMI2Q96E14 147 aa8.95□□□□□ -0.98
GPC1-209ENST00000495100 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
GPC1-209ENST00000495100 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
GPC1-209ENST00000495100 MUC7Q8TAX7 377 aa8.95□□□□□ -0.98
GPC1-209ENST00000495100 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
GPC1-209ENST00000495100 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
GPC1-209ENST00000495100 NDUFC2O95298 119 aa8.94□□□□□ -0.98
GPC1-209ENST00000495100 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
GPC1-209ENST00000495100 M0R378 163 aa8.93□□□□□ -0.98
GPC1-209ENST00000495100 PRLHP81277 87 aa8.93□□□□□ -0.98
GPC1-209ENST00000495100 C7orf33Q8WU49 177 aa8.91□□□□□ -0.98
GPC1-209ENST00000495100 Q6ZQT0 140 aa8.91□□□□□ -0.98
GPC1-209ENST00000495100 C15orf56Q8N910 161 aa8.9□□□□□ -0.98
GPC1-209ENST00000495100 EGFEM1PQ0D2K5 195 aa8.9□□□□□ -0.99
GPC1-209ENST00000495100 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.99
GPC1-209ENST00000495100 F8WEM9 126 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 J3KT08 172 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 VPREB1P12018 145 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 TM2D3Q9BRN9 247 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 IGLV6-57P01721 117 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
GPC1-209ENST00000495100 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
GPC1-209ENST00000495100 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
GPC1-209ENST00000495100 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
GPC1-209ENST00000495100 TGP01266 2768 aa8.85□□□□□ -0.99
GPC1-209ENST00000495100 LINC00167Q96N53 147 aa8.84□□□□□ -0.99
GPC1-209ENST00000495100 C2orf48Q96LS8 159 aa8.82□□□□□ -1
GPC1-209ENST00000495100 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
GPC1-209ENST00000495100 C1orf137Q5JT78 98 aa8.82□□□□□ -1
GPC1-209ENST00000495100 ERC2-IT1O76042 136 aa8.81□□□□□ -1
GPC1-209ENST00000495100 C4orf26Q17RF5 130 aa8.81□□□□□ -1
GPC1-209ENST00000495100 FAM236DA0A1B0GTK5 79 aa8.8□□□□□ -1
GPC1-209ENST00000495100 FAM236CP0DP71 79 aa8.8□□□□□ -1
GPC1-209ENST00000495100 LINC01600Q96MT4 127 aa8.79□□□□□ -1
GPC1-209ENST00000495100 LINC01556Q5JQF7 62 aa8.78□□□□□ -1
GPC1-209ENST00000495100 CRYGAP11844 174 aa8.77□□□□□ -1
GPC1-209ENST00000495100 UBE2AP49459 152 aa8.77□□□□□ -1.01
GPC1-209ENST00000495100 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
GPC1-209ENST00000495100 OBSCN-AS1Q96MR7 158 aa8.77□□□□□ -1.01
GPC1-209ENST00000495100 A0A087WSZ3 146 aa8.76□□□□□ -1.01
GPC1-209ENST00000495100 RPL37AP61513 92 aaKnown RBP8.76□□□□□ -1.01
GPC1-209ENST00000495100 ATP5EP2Q5VTU8 51 aa8.76□□□□□ -1.01
GPC1-209ENST00000495100 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
GPC1-209ENST00000495100 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
GPC1-209ENST00000495100 DNAH10OSP0CZ25 163 aa8.75□□□□□ -1.01
GPC1-209ENST00000495100 PDE6GP18545 87 aa8.75□□□□□ -1.01
GPC1-209ENST00000495100 Q8N377 158 aa8.75□□□□□ -1.01
GPC1-209ENST00000495100 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
GPC1-209ENST00000495100 TMEM258P61165 79 aa8.74□□□□□ -1.01
GPC1-209ENST00000495100 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
GPC1-209ENST00000495100 H0Y9J4 135 aa8.74□□□□□ -1.01
GPC1-209ENST00000495100 K7EIL1 84 aa8.72□□□□□ -1.01
GPC1-209ENST00000495100 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
GPC1-209ENST00000495100 A0A0U1RQV1 116 aa8.71□□□□□ -1.02
GPC1-209ENST00000495100 REG3GQ6UW15 175 aa8.71□□□□□ -1.02
GPC1-209ENST00000495100 NDUFS5O43920 106 aa8.71□□□□□ -1.02
GPC1-209ENST00000495100 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
GPC1-209ENST00000495100 Q9BRP9 147 aa8.7□□□□□ -1.02
GPC1-209ENST00000495100 GVQW2A0A096LPI5 108 aaPredicted RBP8.7□□□□□ -1.02
GPC1-209ENST00000495100 LINC00474Q9P2X8 69 aa8.7□□□□□ -1.02
GPC1-209ENST00000495100 Q6ZRX8 168 aa8.69□□□□□ -1.02
GPC1-209ENST00000495100 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
GPC1-209ENST00000495100 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
GPC1-209ENST00000495100 C5orf47Q569G3 176 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 OXTP01178 125 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 DHRS4-AS1Q9P1J3 65 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 K7EQZ3 153 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 KRTAP26-1Q6PEX3 210 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 BRK1Q8WUW1 75 aa8.67□□□□□ -1.02
GPC1-209ENST00000495100 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
GPC1-209ENST00000495100 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
GPC1-209ENST00000495100 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
GPC1-209ENST00000495100 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
GPC1-209ENST00000495100 PKIGQ9Y2B9 76 aa8.65□□□□□ -1.02
GPC1-209ENST00000495100 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
GPC1-209ENST00000495100 CXCL6P80162 114 aa8.62□□□□□ -1.03
GPC1-209ENST00000495100 KCNQ1DNQ9H478 68 aa8.62□□□□□ -1.03
GPC1-209ENST00000495100 H7BZZ5 65 aa8.62□□□□□ -1.03
GPC1-209ENST00000495100 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
GPC1-209ENST00000495100 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
GPC1-209ENST00000495100 H3BNG1 76 aa8.59□□□□□ -1.03
GPC1-209ENST00000495100 TRBV7-6A0A0J9YX20 115 aa8.59□□□□□ -1.03
GPC1-209ENST00000495100 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
GPC1-209ENST00000495100 PRYO14603 147 aa8.58□□□□□ -1.04
GPC1-209ENST00000495100 MDFIQ99750 246 aa8.58□□□□□ -1.04
GPC1-209ENST00000495100 PSPHP1O15172 72 aa8.58□□□□□ -1.04
GPC1-209ENST00000495100 H3BQ85 93 aa8.57□□□□□ -1.04
GPC1-209ENST00000495100 Q8NBF4 154 aa8.57□□□□□ -1.04
GPC1-209ENST00000495100 ANK2Q01484 3957 aa8.56□□□□□ -1.04
GPC1-209ENST00000495100 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
GPC1-209ENST00000495100 IGFL1Q6UW32 110 aa8.55□□□□□ -1.04
GPC1-209ENST00000495100 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
GPC1-209ENST00000495100 LY6G6CO95867 125 aa8.54□□□□□ -1.04
GPC1-209ENST00000495100 KRTAP7-1Q8IUC3 87 aa8.54□□□□□ -1.04
GPC1-209ENST00000495100 B9D2Q9BPU9 175 aa8.54□□□□□ -1.04
GPC1-209ENST00000495100 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms