RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SPANXB1Q9NS25 103 aaPredicted RBP7.19□□□□□ -1.26
HSPG2-212ENST00000493940 S100A2P29034 98 aa7.18□□□□□ -1.26
HSPG2-212ENST00000493940 GAGE2AQ6NT46 116 aa7.18□□□□□ -1.26
HSPG2-212ENST00000493940 PET117Q6UWS5 81 aa7.18□□□□□ -1.26
HSPG2-212ENST00000493940 Q8NBF4 154 aa7.18□□□□□ -1.26
HSPG2-212ENST00000493940 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
HSPG2-212ENST00000493940 Q6ZRX8 168 aa7.17□□□□□ -1.26
HSPG2-212ENST00000493940 HIST3H2BBQ8N257 126 aa7.17□□□□□ -1.26
HSPG2-212ENST00000493940 LINC00308Q8TCZ7 52 aa7.17□□□□□ -1.26
HSPG2-212ENST00000493940 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
HSPG2-212ENST00000493940 ZNF706Q9Y5V0 76 aaPredicted RBP7.16□□□□□ -1.26
HSPG2-212ENST00000493940 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
HSPG2-212ENST00000493940 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
HSPG2-212ENST00000493940 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
HSPG2-212ENST00000493940 S100A7L2Q5SY68 101 aa7.15□□□□□ -1.26
HSPG2-212ENST00000493940 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.26
HSPG2-212ENST00000493940 MIEN1Q9BRT3 115 aa7.15□□□□□ -1.26
HSPG2-212ENST00000493940 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.27
HSPG2-212ENST00000493940 TRAV23DV6A0A075B6W5 121 aa7.14□□□□□ -1.27
HSPG2-212ENST00000493940 ZNF815PA8K554 130 aa7.14□□□□□ -1.27
HSPG2-212ENST00000493940 KRTDAPP60985 99 aa7.14□□□□□ -1.27
HSPG2-212ENST00000493940 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
HSPG2-212ENST00000493940 KRTAP9-6A0A140TA67 174 aa7.13□□□□□ -1.27
HSPG2-212ENST00000493940 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
HSPG2-212ENST00000493940 CTAG1AP78358 180 aa7.13□□□□□ -1.27
HSPG2-212ENST00000493940 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
HSPG2-212ENST00000493940 ATOH7Q8N100 152 aa7.13□□□□□ -1.27
HSPG2-212ENST00000493940 HIST1H2BLQ99880 126 aa7.13□□□□□ -1.27
HSPG2-212ENST00000493940 TIMM17BO60830 172 aa7.12□□□□□ -1.27
HSPG2-212ENST00000493940 MOBPQ13875 183 aa7.12□□□□□ -1.27
HSPG2-212ENST00000493940 SPAG11AQ6PDA7 123 aa7.12□□□□□ -1.27
HSPG2-212ENST00000493940 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
HSPG2-212ENST00000493940 C20orf202A1L168 122 aa7.1□□□□□ -1.27
HSPG2-212ENST00000493940 S100A12P80511 92 aa7.09□□□□□ -1.27
HSPG2-212ENST00000493940 PCP2Q8IVA1 136 aa7.09□□□□□ -1.27
HSPG2-212ENST00000493940 OR13C6PQ8NH95 151 aa7.09□□□□□ -1.27
HSPG2-212ENST00000493940 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
HSPG2-212ENST00000493940 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
HSPG2-212ENST00000493940 SSBP3-AS1Q7Z2R9 100 aa7.08□□□□□ -1.28
HSPG2-212ENST00000493940 Q8N377 158 aa7.08□□□□□ -1.28
HSPG2-212ENST00000493940 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
HSPG2-212ENST00000493940 SPINK1P00995 79 aa7.07□□□□□ -1.28
HSPG2-212ENST00000493940 SPANXDQ9BXN6 97 aa7.07□□□□□ -1.28
HSPG2-212ENST00000493940 AKR1D1P51857 326 aa7.05□□□□□ -1.28
HSPG2-212ENST00000493940 JOSD1Q15040 202 aaPredicted RBP7.05□□□□□ -1.28
HSPG2-212ENST00000493940 C6orf99Q4VX62 202 aa7.05□□□□□ -1.28
HSPG2-212ENST00000493940 MUSTN1Q8IVN3 82 aa7.05□□□□□ -1.28
HSPG2-212ENST00000493940 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
HSPG2-212ENST00000493940 SPRR1BP22528 89 aa7.04□□□□□ -1.28
HSPG2-212ENST00000493940 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
HSPG2-212ENST00000493940 SCGB1D1O95968 90 aa7.03□□□□□ -1.28
HSPG2-212ENST00000493940 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
HSPG2-212ENST00000493940 C9orf153Q5TBE3 101 aa7.03□□□□□ -1.28
HSPG2-212ENST00000493940 SCGB1D4Q6XE38 83 aa7.03□□□□□ -1.28
HSPG2-212ENST00000493940 COX7BP24311 80 aa7.01□□□□□ -1.29
HSPG2-212ENST00000493940 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
HSPG2-212ENST00000493940 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
HSPG2-212ENST00000493940 LINC00518Q8N0U6 118 aa7.01□□□□□ -1.29
HSPG2-212ENST00000493940 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
HSPG2-212ENST00000493940 HRCT1Q6UXD1 115 aa7□□□□□ -1.29
HSPG2-212ENST00000493940 SMIM29Q86T20 159 aa7□□□□□ -1.29
HSPG2-212ENST00000493940 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
HSPG2-212ENST00000493940 A0A0G2JQZ4 141 aa6.99□□□□□ -1.29
HSPG2-212ENST00000493940 IFITM1P13164 125 aa6.99□□□□□ -1.29
HSPG2-212ENST00000493940 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
HSPG2-212ENST00000493940 A6NDN8 102 aa6.98□□□□□ -1.29
HSPG2-212ENST00000493940 HSBP1L1C9JCN9 74 aa6.98□□□□□ -1.29
HSPG2-212ENST00000493940 Q1RN00 199 aa6.98□□□□□ -1.29
HSPG2-212ENST00000493940 SLC25A20O43772 301 aa6.97□□□□□ -1.29
HSPG2-212ENST00000493940 SMIM11BQ8TCY0 68 aa6.97□□□□□ -1.29
HSPG2-212ENST00000493940 CBY1Q9Y3M2 126 aa6.97□□□□□ -1.29
HSPG2-212ENST00000493940 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
HSPG2-212ENST00000493940 Q6ZVH6 145 aa6.96□□□□□ -1.3
HSPG2-212ENST00000493940 TRBV7-6A0A0J9YX20 115 aa6.95□□□□□ -1.3
HSPG2-212ENST00000493940 TAL2Q16559 108 aa6.95□□□□□ -1.3
HSPG2-212ENST00000493940 PYY3Q5JQD4 70 aa6.95□□□□□ -1.3
HSPG2-212ENST00000493940 A0A1B0GWB2 263 aa6.94□□□□□ -1.3
HSPG2-212ENST00000493940 VAMP8Q9BV40 100 aa6.94□□□□□ -1.3
HSPG2-212ENST00000493940 LAMTOR3Q9UHA4 124 aa6.94□□□□□ -1.3
HSPG2-212ENST00000493940 IGLV5-48A0A075B6I7 105 aa6.93□□□□□ -1.3
HSPG2-212ENST00000493940 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
HSPG2-212ENST00000493940 XP32Q5T750 250 aa6.93□□□□□ -1.3
HSPG2-212ENST00000493940 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
HSPG2-212ENST00000493940 A4D1N5 150 aa6.92□□□□□ -1.3
HSPG2-212ENST00000493940 H7C2G1 150 aa6.92□□□□□ -1.3
HSPG2-212ENST00000493940 PAM16Q9Y3D7 125 aa6.91□□□□□ -1.3
HSPG2-212ENST00000493940 TRAV13-2A0A0B4J235 113 aa6.9□□□□□ -1.3
HSPG2-212ENST00000493940 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
HSPG2-212ENST00000493940 SPATA45Q537H7 98 aa6.9□□□□□ -1.3
HSPG2-212ENST00000493940 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
HSPG2-212ENST00000493940 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
HSPG2-212ENST00000493940 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
HSPG2-212ENST00000493940 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
HSPG2-212ENST00000493940 PRO1933Q9H354 126 aa6.88□□□□□ -1.31
HSPG2-212ENST00000493940 LINC00575Q6W349 94 aa6.87□□□□□ -1.31
HSPG2-212ENST00000493940 C12orf57Q99622 126 aa6.87□□□□□ -1.31
HSPG2-212ENST00000493940 COX8AP10176 69 aa6.86□□□□□ -1.31
HSPG2-212ENST00000493940 CD164Q04900 197 aa6.86□□□□□ -1.31
HSPG2-212ENST00000493940 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
HSPG2-212ENST00000493940 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms