RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SPRR1BP22528 89 aa9.44□□□□□ -0.9
NUP50-218ENST00000493456 COMMD7Q86VX2 200 aa9.44□□□□□ -0.9
NUP50-218ENST00000493456 HINT1P49773 126 aaPredicted RBP9.43□□□□□ -0.9
NUP50-218ENST00000493456 RHEBQ15382 184 aa9.43□□□□□ -0.9
NUP50-218ENST00000493456 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.42□□□□□ -0.9
NUP50-218ENST00000493456 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
NUP50-218ENST00000493456 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
NUP50-218ENST00000493456 RPS10P5Q9NQ39 176 aa9.42□□□□□ -0.9
NUP50-218ENST00000493456 CBY1Q9Y3M2 126 aa9.42□□□□□ -0.9
NUP50-218ENST00000493456 LEPROTO15243 131 aa9.41□□□□□ -0.9
NUP50-218ENST00000493456 RPL37P61927 97 aaKnown RBP9.41□□□□□ -0.9
NUP50-218ENST00000493456 CD164Q04900 197 aa9.41□□□□□ -0.9
NUP50-218ENST00000493456 LAMTOR3Q9UHA4 124 aa9.41□□□□□ -0.9
NUP50-218ENST00000493456 NMUP48645 174 aa9.38□□□□□ -0.91
NUP50-218ENST00000493456 J3QQQ9 107 aa9.37□□□□□ -0.91
NUP50-218ENST00000493456 Q5XG85 94 aa9.37□□□□□ -0.91
NUP50-218ENST00000493456 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
NUP50-218ENST00000493456 SSPOA2VEC9 5147 aa9.37□□□□□ -0.91
NUP50-218ENST00000493456 USH2AO75445 5202 aa9.37□□□□□ -0.91
NUP50-218ENST00000493456 C10orf91Q5T1B1 145 aa9.35□□□□□ -0.91
NUP50-218ENST00000493456 PLNP26678 52 aa9.34□□□□□ -0.91
NUP50-218ENST00000493456 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
NUP50-218ENST00000493456 PRO1933Q9H354 126 aa9.34□□□□□ -0.91
NUP50-218ENST00000493456 H0Y8G0 127 aa9.33□□□□□ -0.92
NUP50-218ENST00000493456 H7C2G1 150 aa9.33□□□□□ -0.92
NUP50-218ENST00000493456 HERVK_113P61574 105 aa9.33□□□□□ -0.92
NUP50-218ENST00000493456 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
NUP50-218ENST00000493456 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
NUP50-218ENST00000493456 HSBP1O75506 76 aa9.31□□□□□ -0.92
NUP50-218ENST00000493456 NPC2P61916 151 aa9.31□□□□□ -0.92
NUP50-218ENST00000493456 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
NUP50-218ENST00000493456 Q1RN00 199 aa9.29□□□□□ -0.92
NUP50-218ENST00000493456 TAL2Q16559 108 aa9.28□□□□□ -0.92
NUP50-218ENST00000493456 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
NUP50-218ENST00000493456 AKR1D1P51857 326 aa9.27□□□□□ -0.93
NUP50-218ENST00000493456 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
NUP50-218ENST00000493456 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
NUP50-218ENST00000493456 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
NUP50-218ENST00000493456 SPANXCQ9NY87 97 aa9.27□□□□□ -0.93
NUP50-218ENST00000493456 TEX49A0A1B0GTD5 131 aa9.26□□□□□ -0.93
NUP50-218ENST00000493456 DPM2O94777 84 aa9.26□□□□□ -0.93
NUP50-218ENST00000493456 CFC1P0CG37 223 aa9.26□□□□□ -0.93
NUP50-218ENST00000493456 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
NUP50-218ENST00000493456 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
NUP50-218ENST00000493456 COX7BP24311 80 aa9.25□□□□□ -0.93
NUP50-218ENST00000493456 DEFB105AQ8NG35 78 aa9.24□□□□□ -0.93
NUP50-218ENST00000493456 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
NUP50-218ENST00000493456 IGKCP01834 107 aa9.23□□□□□ -0.93
NUP50-218ENST00000493456 Q6Q795 121 aa9.22□□□□□ -0.93
NUP50-218ENST00000493456 C6orf99Q4VX62 202 aa9.21□□□□□ -0.94
NUP50-218ENST00000493456 LINC00308Q8TCZ7 52 aa9.21□□□□□ -0.94
NUP50-218ENST00000493456 FCGBPQ9Y6R7 5405 aaPredicted RBP9.2□□□□□ -0.94
NUP50-218ENST00000493456 TCL1BO95988 128 aa9.2□□□□□ -0.94
NUP50-218ENST00000493456 HSPB8Q9UJY1 196 aa9.2□□□□□ -0.94
NUP50-218ENST00000493456 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
NUP50-218ENST00000493456 E9PLD3 99 aa9.18□□□□□ -0.94
NUP50-218ENST00000493456 SNAPINO95295 136 aa9.18□□□□□ -0.94
NUP50-218ENST00000493456 YPEL4Q96NS1 127 aa9.18□□□□□ -0.94
NUP50-218ENST00000493456 IGLV5-48A0A075B6I7 105 aa9.17□□□□□ -0.94
NUP50-218ENST00000493456 TRBV7-6A0A0J9YX20 115 aa9.17□□□□□ -0.94
NUP50-218ENST00000493456 APOC3P02656 99 aa9.17□□□□□ -0.94
NUP50-218ENST00000493456 LINC00518Q8N0U6 118 aa9.17□□□□□ -0.94
NUP50-218ENST00000493456 LITAFQ99732 161 aa9.17□□□□□ -0.94
NUP50-218ENST00000493456 A0A0G2JQZ4 141 aa9.16□□□□□ -0.94
NUP50-218ENST00000493456 TIMM17BO60830 172 aa9.16□□□□□ -0.94
NUP50-218ENST00000493456 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
NUP50-218ENST00000493456 SVBPQ8N300 66 aa9.16□□□□□ -0.94
NUP50-218ENST00000493456 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
NUP50-218ENST00000493456 SERF1AO75920 110 aa9.14□□□□□ -0.95
NUP50-218ENST00000493456 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
NUP50-218ENST00000493456 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
NUP50-218ENST00000493456 FABP4P15090 132 aa9.13□□□□□ -0.95
NUP50-218ENST00000493456 LINC00310P59036 64 aa9.13□□□□□ -0.95
NUP50-218ENST00000493456 Q75L30 129 aa9.13□□□□□ -0.95
NUP50-218ENST00000493456 C20orf202A1L168 122 aa9.09□□□□□ -0.95
NUP50-218ENST00000493456 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
NUP50-218ENST00000493456 TRGC2P03986 189 aa9.07□□□□□ -0.96
NUP50-218ENST00000493456 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
NUP50-218ENST00000493456 A4D1N5 150 aa9.06□□□□□ -0.96
NUP50-218ENST00000493456 NHP2Q9NX24 153 aaKnown RBP9.06□□□□□ -0.96
NUP50-218ENST00000493456 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
NUP50-218ENST00000493456 F8WEM9 126 aa9.05□□□□□ -0.96
NUP50-218ENST00000493456 MACF1Q9UPN3 7388 aaKnown RBP9.04□□□□□ -0.96
NUP50-218ENST00000493456 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
NUP50-218ENST00000493456 COPS9Q8WXC6 57 aa9.02□□□□□ -0.97
NUP50-218ENST00000493456 TRBV20-1A0A075B6N2 111 aa9□□□□□ -0.97
NUP50-218ENST00000493456 TRBV7-7A0A0K0K1E9 115 aa9□□□□□ -0.97
NUP50-218ENST00000493456 A6NDN8 102 aa9□□□□□ -0.97
NUP50-218ENST00000493456 SYNE2Q8WXH0 6885 aaKnown RBP9□□□□□ -0.97
NUP50-218ENST00000493456 Q6JHZ5 121 aa8.99□□□□□ -0.97
NUP50-218ENST00000493456 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
NUP50-218ENST00000493456 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
NUP50-218ENST00000493456 MT2AP02795 61 aa8.98□□□□□ -0.97
NUP50-218ENST00000493456 TTTY13Q9BZ97 58 aa8.97□□□□□ -0.97
NUP50-218ENST00000493456 IFITM1P13164 125 aa8.96□□□□□ -0.98
NUP50-218ENST00000493456 LCE2BO14633 110 aa8.95□□□□□ -0.98
NUP50-218ENST00000493456 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
NUP50-218ENST00000493456 SCGB1D4Q6XE38 83 aa8.95□□□□□ -0.98
NUP50-218ENST00000493456 Q96NJ1 140 aa8.95□□□□□ -0.98
NUP50-218ENST00000493456 IGFL1Q6UW32 110 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms