RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
CDC42SE1-206ENST00000492796 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 ETDCA0A1B0GVM5 59 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 CRYGAP11844 174 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 HIGD2AQ9BW72 106 aa6.33□□□□□ -1.4
CDC42SE1-206ENST00000492796 A0A087X002 238 aa6.32□□□□□ -1.4
CDC42SE1-206ENST00000492796 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
CDC42SE1-206ENST00000492796 SPANXDQ9BXN6 97 aa6.32□□□□□ -1.4
CDC42SE1-206ENST00000492796 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
CDC42SE1-206ENST00000492796 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
CDC42SE1-206ENST00000492796 TRAV23DV6A0A075B6W5 121 aa6.3□□□□□ -1.4
CDC42SE1-206ENST00000492796 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
CDC42SE1-206ENST00000492796 HSBP1L1C9JCN9 74 aa6.3□□□□□ -1.4
CDC42SE1-206ENST00000492796 Q6ZVH6 145 aa6.3□□□□□ -1.4
CDC42SE1-206ENST00000492796 TYMSOSQ8TAI1 123 aa6.3□□□□□ -1.4
CDC42SE1-206ENST00000492796 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
CDC42SE1-206ENST00000492796 B5MCH6 92 aa6.29□□□□□ -1.4
CDC42SE1-206ENST00000492796 IFITM1P13164 125 aa6.29□□□□□ -1.4
CDC42SE1-206ENST00000492796 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
CDC42SE1-206ENST00000492796 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
CDC42SE1-206ENST00000492796 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
CDC42SE1-206ENST00000492796 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
CDC42SE1-206ENST00000492796 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE1-206ENST00000492796 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
CDC42SE1-206ENST00000492796 Q6ZRX8 168 aa6.28□□□□□ -1.4
CDC42SE1-206ENST00000492796 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
CDC42SE1-206ENST00000492796 JOSD1Q15040 202 aaPredicted RBP6.27□□□□□ -1.41
CDC42SE1-206ENST00000492796 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
CDC42SE1-206ENST00000492796 HINT1P49773 126 aaPredicted RBP6.26□□□□□ -1.41
CDC42SE1-206ENST00000492796 OR13C6PQ8NH95 151 aa6.26□□□□□ -1.41
CDC42SE1-206ENST00000492796 Q9BRP9 147 aa6.25□□□□□ -1.41
CDC42SE1-206ENST00000492796 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
CDC42SE1-206ENST00000492796 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
CDC42SE1-206ENST00000492796 CTAG1AP78358 180 aa6.23□□□□□ -1.41
CDC42SE1-206ENST00000492796 MUSTN1Q8IVN3 82 aa6.23□□□□□ -1.41
CDC42SE1-206ENST00000492796 ERC2-IT1O76042 136 aa6.22□□□□□ -1.41
CDC42SE1-206ENST00000492796 C3orf22Q8N5N4 141 aa6.22□□□□□ -1.41
CDC42SE1-206ENST00000492796 GAGE2AQ6NT46 116 aa6.21□□□□□ -1.42
CDC42SE1-206ENST00000492796 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
CDC42SE1-206ENST00000492796 TRAV13-2A0A0B4J235 113 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 TRBV7-6A0A0J9YX20 115 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 A6NDN8 102 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 TSPAN13O95857 204 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 COX8AP10176 69 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 COX7BP24311 80 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 ELOF1P60002 83 aaKnown RBP6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
CDC42SE1-206ENST00000492796 DLEU1O43261 78 aa6.19□□□□□ -1.42
CDC42SE1-206ENST00000492796 C21orf62-AS1Q17RA5 79 aa6.19□□□□□ -1.42
CDC42SE1-206ENST00000492796 SPAG11AQ6PDA7 123 aa6.18□□□□□ -1.42
CDC42SE1-206ENST00000492796 C12orf57Q99622 126 aa6.18□□□□□ -1.42
CDC42SE1-206ENST00000492796 A0A1B0GWB2 263 aa6.17□□□□□ -1.42
CDC42SE1-206ENST00000492796 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
CDC42SE1-206ENST00000492796 PRR4Q16378 134 aa6.17□□□□□ -1.42
CDC42SE1-206ENST00000492796 VAMP8Q9BV40 100 aa6.17□□□□□ -1.42
CDC42SE1-206ENST00000492796 A4D1N5 150 aa6.16□□□□□ -1.42
CDC42SE1-206ENST00000492796 SPATA45Q537H7 98 aa6.16□□□□□ -1.42
CDC42SE1-206ENST00000492796 Q8NBF4 154 aa6.16□□□□□ -1.42
CDC42SE1-206ENST00000492796 HIST1H4GQ99525 98 aa6.16□□□□□ -1.42
CDC42SE1-206ENST00000492796 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
CDC42SE1-206ENST00000492796 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.42
CDC42SE1-206ENST00000492796 SPRR1BP22528 89 aa6.15□□□□□ -1.42
CDC42SE1-206ENST00000492796 MOBPQ13875 183 aa6.15□□□□□ -1.42
CDC42SE1-206ENST00000492796 SLC25A34Q6PIV7 304 aa6.15□□□□□ -1.42
CDC42SE1-206ENST00000492796 SSBP3-AS1Q7Z2R9 100 aa6.15□□□□□ -1.42
CDC42SE1-206ENST00000492796 ST20-AS1Q8NBB2 130 aa6.15□□□□□ -1.42
CDC42SE1-206ENST00000492796 SMIM6P0DI80 62 aa6.14□□□□□ -1.43
CDC42SE1-206ENST00000492796 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
CDC42SE1-206ENST00000492796 C14orf144Q96I85 54 aa6.14□□□□□ -1.43
CDC42SE1-206ENST00000492796 NHP2Q9NX24 153 aaKnown RBP6.14□□□□□ -1.43
CDC42SE1-206ENST00000492796 HIGD1BQ9P298 99 aa6.14□□□□□ -1.43
CDC42SE1-206ENST00000492796 SPINK1P00995 79 aa6.13□□□□□ -1.43
CDC42SE1-206ENST00000492796 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
CDC42SE1-206ENST00000492796 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
CDC42SE1-206ENST00000492796 LRP2P98164 4655 aa6.12□□□□□ -1.43
CDC42SE1-206ENST00000492796 VAMP3Q15836 100 aa6.11□□□□□ -1.43
CDC42SE1-206ENST00000492796 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
CDC42SE1-206ENST00000492796 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
CDC42SE1-206ENST00000492796 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
CDC42SE1-206ENST00000492796 TAL2Q16559 108 aa6.1□□□□□ -1.43
CDC42SE1-206ENST00000492796 PYY3Q5JQD4 70 aa6.1□□□□□ -1.43
CDC42SE1-206ENST00000492796 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
CDC42SE1-206ENST00000492796 IGLV5-48A0A075B6I7 105 aa6.09□□□□□ -1.43
CDC42SE1-206ENST00000492796 SLC25A20O43772 301 aa6.09□□□□□ -1.43
CDC42SE1-206ENST00000492796 LPAP08519 4548 aa6.09□□□□□ -1.43
CDC42SE1-206ENST00000492796 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
CDC42SE1-206ENST00000492796 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
CDC42SE1-206ENST00000492796 DEFB105AQ8NG35 78 aa6.08□□□□□ -1.44
CDC42SE1-206ENST00000492796 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
CDC42SE1-206ENST00000492796 A0A0B4J2C4 111 aa6.07□□□□□ -1.44
CDC42SE1-206ENST00000492796 LINC01547P58512 204 aaPredicted RBP6.07□□□□□ -1.44
CDC42SE1-206ENST00000492796 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
CDC42SE1-206ENST00000492796 RAB37Q96AX2 223 aa6.07□□□□□ -1.44
CDC42SE1-206ENST00000492796 CFC1BP0CG36 223 aa6.06□□□□□ -1.44
CDC42SE1-206ENST00000492796 CFC1P0CG37 223 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms