RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PPDPFQ9H3Y8 114 aa13.61□□□□□ -0.23
CTDSP1-211ENST00000492545 EIF4EBP3O60516 100 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-211ENST00000492545 NPC2P61916 151 aa13.6□□□□□ -0.23
CTDSP1-211ENST00000492545 GAGE2AQ6NT46 116 aa13.6□□□□□ -0.23
CTDSP1-211ENST00000492545 LITAFQ99732 161 aa13.6□□□□□ -0.23
CTDSP1-211ENST00000492545 SPANXCQ9NY87 97 aa13.6□□□□□ -0.23
CTDSP1-211ENST00000492545 ZNF73O43830 326 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-211ENST00000492545 LINC00308Q8TCZ7 52 aa13.59□□□□□ -0.23
CTDSP1-211ENST00000492545 Q9BRP9 147 aa13.59□□□□□ -0.23
CTDSP1-211ENST00000492545 IGLV7-46A0A075B6I9 117 aa13.58□□□□□ -0.24
CTDSP1-211ENST00000492545 ZNF815PA8K554 130 aa13.58□□□□□ -0.24
CTDSP1-211ENST00000492545 ERC2-IT1O76042 136 aa13.58□□□□□ -0.24
CTDSP1-211ENST00000492545 HINT1P49773 126 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-211ENST00000492545 TPRXLQ17RH7 258 aa13.58□□□□□ -0.24
CTDSP1-211ENST00000492545 Q8NBF4 154 aa13.58□□□□□ -0.24
CTDSP1-211ENST00000492545 SPINK1P00995 79 aa13.57□□□□□ -0.24
CTDSP1-211ENST00000492545 C20orf202A1L168 122 aa13.56□□□□□ -0.24
CTDSP1-211ENST00000492545 C5orf52A6NGY3 159 aa13.56□□□□□ -0.24
CTDSP1-211ENST00000492545 KRTDAPP60985 99 aa13.56□□□□□ -0.24
CTDSP1-211ENST00000492545 SSBP3-AS1Q7Z2R9 100 aa13.56□□□□□ -0.24
CTDSP1-211ENST00000492545 AKR1D1P51857 326 aa13.55□□□□□ -0.24
CTDSP1-211ENST00000492545 FP248Q71RG6 208 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-211ENST00000492545 LINC00518Q8N0U6 118 aa13.53□□□□□ -0.24
CTDSP1-211ENST00000492545 SPANXDQ9BXN6 97 aa13.52□□□□□ -0.25
CTDSP1-211ENST00000492545 CDIP1Q9H305 208 aa13.52□□□□□ -0.25
CTDSP1-211ENST00000492545 OR13C6PQ8NH95 151 aa13.51□□□□□ -0.25
CTDSP1-211ENST00000492545 COPS9Q8WXC6 57 aa13.5□□□□□ -0.25
CTDSP1-211ENST00000492545 MUC2Q02817 5179 aa13.5□□□□□ -0.25
CTDSP1-211ENST00000492545 IGLV9-49A0A0B4J1Y8 123 aa13.49□□□□□ -0.25
CTDSP1-211ENST00000492545 RPS29P62273 56 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-211ENST00000492545 MOBPQ13875 183 aa13.49□□□□□ -0.25
CTDSP1-211ENST00000492545 SCGB1D4Q6XE38 83 aa13.48□□□□□ -0.25
CTDSP1-211ENST00000492545 TTTY13Q9BZ97 58 aa13.48□□□□□ -0.25
CTDSP1-211ENST00000492545 A0A0U1RQV1 116 aa13.46□□□□□ -0.25
CTDSP1-211ENST00000492545 DHRS4-AS1Q9P1J3 65 aa13.46□□□□□ -0.25
CTDSP1-211ENST00000492545 Q6ZVH6 145 aa13.45□□□□□ -0.26
CTDSP1-211ENST00000492545 IFITM1P13164 125 aa13.43□□□□□ -0.26
CTDSP1-211ENST00000492545 SNRPEP62304 92 aaKnown RBP13.43□□□□□ -0.26
CTDSP1-211ENST00000492545 ANKRD39Q53RE8 183 aa13.42□□□□□ -0.26
CTDSP1-211ENST00000492545 SLC25A34Q6PIV7 304 aa13.42□□□□□ -0.26
CTDSP1-211ENST00000492545 ST20-AS1Q8NBB2 130 aa13.41□□□□□ -0.26
CTDSP1-211ENST00000492545 SPRR1BP22528 89 aa13.39□□□□□ -0.27
CTDSP1-211ENST00000492545 C9orf153Q5TBE3 101 aa13.39□□□□□ -0.27
CTDSP1-211ENST00000492545 TRBV7-6A0A0J9YX20 115 aa13.38□□□□□ -0.27
CTDSP1-211ENST00000492545 SLC25A20O43772 301 aa13.38□□□□□ -0.27
CTDSP1-211ENST00000492545 COX7BP24311 80 aa13.38□□□□□ -0.27
CTDSP1-211ENST00000492545 ELOF1P60002 83 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-211ENST00000492545 ATOH7Q8N100 152 aa13.38□□□□□ -0.27
CTDSP1-211ENST00000492545 C6orf99Q4VX62 202 aa13.37□□□□□ -0.27
CTDSP1-211ENST00000492545 Q8N377 158 aa13.36□□□□□ -0.27
CTDSP1-211ENST00000492545 S100A1P23297 94 aa13.34□□□□□ -0.27
CTDSP1-211ENST00000492545 PCP2Q8IVA1 136 aa13.34□□□□□ -0.27
CTDSP1-211ENST00000492545 KRTAP13-3Q3SY46 172 aa13.33□□□□□ -0.28
CTDSP1-211ENST00000492545 LAMTOR3Q9UHA4 124 aa13.33□□□□□ -0.28
CTDSP1-211ENST00000492545 S100A2P29034 98 aa13.32□□□□□ -0.28
CTDSP1-211ENST00000492545 A6NDN8 102 aa13.31□□□□□ -0.28
CTDSP1-211ENST00000492545 MUSTN1Q8IVN3 82 aa13.31□□□□□ -0.28
CTDSP1-211ENST00000492545 HIST3H2BBQ8N257 126 aa13.31□□□□□ -0.28
CTDSP1-211ENST00000492545 A0A1B0GWB2 263 aa13.3□□□□□ -0.28
CTDSP1-211ENST00000492545 HIST1H2BLQ99880 126 aa13.3□□□□□ -0.28
CTDSP1-211ENST00000492545 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
CTDSP1-211ENST00000492545 A4D1N5 150 aa13.28□□□□□ -0.28
CTDSP1-211ENST00000492545 TAL2Q16559 108 aa13.28□□□□□ -0.28
CTDSP1-211ENST00000492545 HSBP1L1C9JCN9 74 aa13.27□□□□□ -0.29
CTDSP1-211ENST00000492545 TEX49A0A1B0GTD5 131 aa13.26□□□□□ -0.29
CTDSP1-211ENST00000492545 S100A6P06703 90 aa13.25□□□□□ -0.29
CTDSP1-211ENST00000492545 MUC17Q685J3 4493 aa13.24□□□□□ -0.29
CTDSP1-211ENST00000492545 LIMD2Q9BT23 127 aa13.24□□□□□ -0.29
CTDSP1-211ENST00000492545 DEFB105AQ8NG35 78 aa13.22□□□□□ -0.29
CTDSP1-211ENST00000492545 NHP2Q9NX24 153 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-211ENST00000492545 CD164Q04900 197 aa13.2□□□□□ -0.3
CTDSP1-211ENST00000492545 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
CTDSP1-211ENST00000492545 PRO1933Q9H354 126 aa13.2□□□□□ -0.3
CTDSP1-211ENST00000492545 IGLV5-48A0A075B6I7 105 aa13.19□□□□□ -0.3
CTDSP1-211ENST00000492545 SMIM11BQ8TCY0 68 aa13.18□□□□□ -0.3
CTDSP1-211ENST00000492545 SEC61BP60468 96 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-211ENST00000492545 VAMP3Q15836 100 aa13.17□□□□□ -0.3
CTDSP1-211ENST00000492545 Q1RN00 199 aa13.17□□□□□ -0.3
CTDSP1-211ENST00000492545 FAT4Q6V0I7 4981 aa13.15□□□□□ -0.3
CTDSP1-211ENST00000492545 HRCT1Q6UXD1 115 aa13.14□□□□□ -0.31
CTDSP1-211ENST00000492545 SMIM29Q86T20 159 aa13.14□□□□□ -0.31
CTDSP1-211ENST00000492545 LINC01547P58512 204 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-211ENST00000492545 H7C2G1 150 aa13.11□□□□□ -0.31
CTDSP1-211ENST00000492545 XP32Q5T750 250 aa13.11□□□□□ -0.31
CTDSP1-211ENST00000492545 SCGB1D1O95968 90 aa13.1□□□□□ -0.31
CTDSP1-211ENST00000492545 Q5XG85 94 aa13.09□□□□□ -0.31
CTDSP1-211ENST00000492545 LCE2AQ5TA79 106 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-211ENST00000492545 LINC00575Q6W349 94 aa13.06□□□□□ -0.32
CTDSP1-211ENST00000492545 COX8AP10176 69 aa13.04□□□□□ -0.32
CTDSP1-211ENST00000492545 DLEU1O43261 78 aa13.03□□□□□ -0.32
CTDSP1-211ENST00000492545 HIST1H4GQ99525 98 aa13.03□□□□□ -0.32
CTDSP1-211ENST00000492545 hADV29S1A0JD25 119 aa13.02□□□□□ -0.33
CTDSP1-211ENST00000492545 F8WEM9 126 aa13□□□□□ -0.33
CTDSP1-211ENST00000492545 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
CTDSP1-211ENST00000492545 Q6ZQY7 126 aa12.97□□□□□ -0.33
CTDSP1-211ENST00000492545 TCL1BO95988 128 aa12.95□□□□□ -0.34
CTDSP1-211ENST00000492545 C1orf195Q5TG92 126 aa12.94□□□□□ -0.34
CTDSP1-211ENST00000492545 Q6JHZ5 121 aa12.94□□□□□ -0.34
CTDSP1-211ENST00000492545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-211ENST00000492545 A0A0G2JQZ4 141 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms