RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 LINC00483Q53H64 154 aa15.63■□□□□ 0.09
SH3GL3-204ENST00000492099 LITAFQ99732 161 aa15.62■□□□□ 0.09
SH3GL3-204ENST00000492099 CBY1Q9Y3M2 126 aa15.62■□□□□ 0.09
SH3GL3-204ENST00000492099 ZNF815PA8K554 130 aa15.61■□□□□ 0.09
SH3GL3-204ENST00000492099 C4orf48Q5BLP8 95 aa15.61■□□□□ 0.09
SH3GL3-204ENST00000492099 KRTDAPP60985 99 aa15.6■□□□□ 0.09
SH3GL3-204ENST00000492099 JOSD1Q15040 202 aaPredicted RBP15.6■□□□□ 0.09
SH3GL3-204ENST00000492099 GAGE2AQ6NT46 116 aa15.6■□□□□ 0.09
SH3GL3-204ENST00000492099 LINC00308Q8TCZ7 52 aa15.6■□□□□ 0.09
SH3GL3-204ENST00000492099 Q9BRP9 147 aa15.6■□□□□ 0.09
SH3GL3-204ENST00000492099 ERC2-IT1O76042 136 aa15.59■□□□□ 0.09
SH3GL3-204ENST00000492099 SPANXCQ9NY87 97 aa15.59■□□□□ 0.09
SH3GL3-204ENST00000492099 ZNF73O43830 326 aaPredicted RBP15.58■□□□□ 0.08
SH3GL3-204ENST00000492099 Q8NBF4 154 aa15.57■□□□□ 0.08
SH3GL3-204ENST00000492099 C20orf202A1L168 122 aa15.56■□□□□ 0.08
SH3GL3-204ENST00000492099 IGLV7-46A0A075B6I9 117 aa15.54■□□□□ 0.08
SH3GL3-204ENST00000492099 HINT1P49773 126 aaPredicted RBP15.54■□□□□ 0.08
SH3GL3-204ENST00000492099 TTTY13Q9BZ97 58 aa15.54■□□□□ 0.08
SH3GL3-204ENST00000492099 OR13C6PQ8NH95 151 aa15.52■□□□□ 0.08
SH3GL3-204ENST00000492099 TPRXLQ17RH7 258 aa15.51■□□□□ 0.07
SH3GL3-204ENST00000492099 SPINK1P00995 79 aa15.5■□□□□ 0.07
SH3GL3-204ENST00000492099 SSBP3-AS1Q7Z2R9 100 aa15.5■□□□□ 0.07
SH3GL3-204ENST00000492099 IGLV9-49A0A0B4J1Y8 123 aa15.49■□□□□ 0.07
SH3GL3-204ENST00000492099 AKR1D1P51857 326 aa15.49■□□□□ 0.07
SH3GL3-204ENST00000492099 SPANXDQ9BXN6 97 aa15.49■□□□□ 0.07
SH3GL3-204ENST00000492099 MOBPQ13875 183 aa15.48■□□□□ 0.07
SH3GL3-204ENST00000492099 LINC00518Q8N0U6 118 aa15.48■□□□□ 0.07
SH3GL3-204ENST00000492099 C5orf52A6NGY3 159 aa15.47■□□□□ 0.07
SH3GL3-204ENST00000492099 SCGB1D4Q6XE38 83 aa15.47■□□□□ 0.07
SH3GL3-204ENST00000492099 CDIP1Q9H305 208 aa15.46■□□□□ 0.07
SH3GL3-204ENST00000492099 FP248Q71RG6 208 aaPredicted RBP15.45■□□□□ 0.06
SH3GL3-204ENST00000492099 ANKRD39Q53RE8 183 aa15.44■□□□□ 0.06
SH3GL3-204ENST00000492099 COPS9Q8WXC6 57 aa15.44■□□□□ 0.06
SH3GL3-204ENST00000492099 ATOH7Q8N100 152 aa15.42■□□□□ 0.06
SH3GL3-204ENST00000492099 DHRS4-AS1Q9P1J3 65 aa15.41■□□□□ 0.06
SH3GL3-204ENST00000492099 MUC2Q02817 5179 aa15.41■□□□□ 0.06
SH3GL3-204ENST00000492099 RPS29P62273 56 aaKnown RBP15.4■□□□□ 0.06
SH3GL3-204ENST00000492099 ST20-AS1Q8NBB2 130 aa15.4■□□□□ 0.06
SH3GL3-204ENST00000492099 IFITM1P13164 125 aa15.39■□□□□ 0.05
SH3GL3-204ENST00000492099 Q6ZVH6 145 aa15.39■□□□□ 0.05
SH3GL3-204ENST00000492099 SNRPEP62304 92 aaKnown RBP15.37■□□□□ 0.05
SH3GL3-204ENST00000492099 C9orf153Q5TBE3 101 aa15.37■□□□□ 0.05
SH3GL3-204ENST00000492099 COX7BP24311 80 aa15.35■□□□□ 0.05
SH3GL3-204ENST00000492099 ELOF1P60002 83 aaKnown RBP15.35■□□□□ 0.05
SH3GL3-204ENST00000492099 C6orf99Q4VX62 202 aa15.35■□□□□ 0.05
SH3GL3-204ENST00000492099 PCP2Q8IVA1 136 aa15.35■□□□□ 0.05
SH3GL3-204ENST00000492099 SLC25A34Q6PIV7 304 aa15.33■□□□□ 0.04
SH3GL3-204ENST00000492099 A0A0U1RQV1 116 aa15.32■□□□□ 0.04
SH3GL3-204ENST00000492099 SPRR1BP22528 89 aa15.32■□□□□ 0.04
SH3GL3-204ENST00000492099 S100A2P29034 98 aa15.32■□□□□ 0.04
SH3GL3-204ENST00000492099 HIST3H2BBQ8N257 126 aa15.32■□□□□ 0.04
SH3GL3-204ENST00000492099 MUSTN1Q8IVN3 82 aa15.3■□□□□ 0.04
SH3GL3-204ENST00000492099 Q8N377 158 aa15.3■□□□□ 0.04
SH3GL3-204ENST00000492099 HIST1H2BLQ99880 126 aa15.3■□□□□ 0.04
SH3GL3-204ENST00000492099 TRBV7-6A0A0J9YX20 115 aa15.29■□□□□ 0.04
SH3GL3-204ENST00000492099 SLC25A20O43772 301 aa15.29■□□□□ 0.04
SH3GL3-204ENST00000492099 A6NDN8 102 aa15.28■□□□□ 0.04
SH3GL3-204ENST00000492099 KRTAP13-3Q3SY46 172 aa15.26■□□□□ 0.03
SH3GL3-204ENST00000492099 LAMTOR3Q9UHA4 124 aa15.26■□□□□ 0.03
SH3GL3-204ENST00000492099 A0A1B0GWB2 263 aa15.24■□□□□ 0.03
SH3GL3-204ENST00000492099 S100A6P06703 90 aa15.24■□□□□ 0.03
SH3GL3-204ENST00000492099 HSBP1L1C9JCN9 74 aa15.23■□□□□ 0.03
SH3GL3-204ENST00000492099 TAL2Q16559 108 aa15.23■□□□□ 0.03
SH3GL3-204ENST00000492099 TRAV13-2A0A0B4J235 113 aa15.22■□□□□ 0.03
SH3GL3-204ENST00000492099 MUC17Q685J3 4493 aa15.2■□□□□ 0.02
SH3GL3-204ENST00000492099 TEX49A0A1B0GTD5 131 aa15.19■□□□□ 0.02
SH3GL3-204ENST00000492099 DEFB105AQ8NG35 78 aa15.19■□□□□ 0.02
SH3GL3-204ENST00000492099 A4D1N5 150 aa15.18■□□□□ 0.02
SH3GL3-204ENST00000492099 SMIM11BQ8TCY0 68 aa15.14■□□□□ 0.01
SH3GL3-204ENST00000492099 LIMD2Q9BT23 127 aa15.14■□□□□ 0.01
SH3GL3-204ENST00000492099 Q1RN00 199 aa15.13■□□□□ 0.01
SH3GL3-204ENST00000492099 NHP2Q9NX24 153 aaKnown RBP15.12■□□□□ 0.01
SH3GL3-204ENST00000492099 HRCT1Q6UXD1 115 aa15.11■□□□□ 0.01
SH3GL3-204ENST00000492099 IGLV5-48A0A075B6I7 105 aa15.1■□□□□ 0.01
SH3GL3-204ENST00000492099 PRO1933Q9H354 126 aa15.1■□□□□ 0.01
SH3GL3-204ENST00000492099 LINC01547P58512 204 aaPredicted RBP15.08■□□□□ 0
SH3GL3-204ENST00000492099 CD164Q04900 197 aa15.08■□□□□ 0
SH3GL3-204ENST00000492099 ASB16-AS1Q495Z4 193 aa15.08■□□□□ 0
SH3GL3-204ENST00000492099 SMIM29Q86T20 159 aa15.08■□□□□ 0
SH3GL3-204ENST00000492099 SCGB1D1O95968 90 aa15.07■□□□□ 0
SH3GL3-204ENST00000492099 VAMP3Q15836 100 aa15.07■□□□□ 0
SH3GL3-204ENST00000492099 SEC61BP60468 96 aaKnown RBP15.04■□□□□ -0
SH3GL3-204ENST00000492099 H7C2G1 150 aa15.02■□□□□ -0
SH3GL3-204ENST00000492099 FAT4Q6V0I7 4981 aa15□□□□□ -0.01
SH3GL3-204ENST00000492099 COX8AP10176 69 aa14.98□□□□□ -0.01
SH3GL3-204ENST00000492099 XP32Q5T750 250 aa14.98□□□□□ -0.01
SH3GL3-204ENST00000492099 LINC00575Q6W349 94 aa14.98□□□□□ -0.01
SH3GL3-204ENST00000492099 HIST1H4GQ99525 98 aa14.98□□□□□ -0.01
SH3GL3-204ENST00000492099 Q5XG85 94 aa14.95□□□□□ -0.02
SH3GL3-204ENST00000492099 DLEU1O43261 78 aa14.94□□□□□ -0.02
SH3GL3-204ENST00000492099 LCE2AQ5TA79 106 aaPredicted RBP14.94□□□□□ -0.02
SH3GL3-204ENST00000492099 hADV29S1A0JD25 119 aa14.93□□□□□ -0.02
SH3GL3-204ENST00000492099 F8WEM9 126 aa14.9□□□□□ -0.02
SH3GL3-204ENST00000492099 C12orf57Q99622 126 aa14.9□□□□□ -0.02
SH3GL3-204ENST00000492099 Q6ZQY7 126 aa14.89□□□□□ -0.03
SH3GL3-204ENST00000492099 A0A0G2JQZ4 141 aa14.88□□□□□ -0.03
SH3GL3-204ENST00000492099 BVES-AS1Q5T3Y7 98 aa14.88□□□□□ -0.03
SH3GL3-204ENST00000492099 C14orf144Q96I85 54 aa14.85□□□□□ -0.03
SH3GL3-204ENST00000492099 KRTAP4-1Q9BYQ7 146 aa14.84□□□□□ -0.03
SH3GL3-204ENST00000492099 C1orf195Q5TG92 126 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms