RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SPRR1AP35321 89 aa11.52□□□□□ -0.57
MCF2L-230ENST00000491028 RPL37AP61513 92 aaKnown RBP11.51□□□□□ -0.57
MCF2L-230ENST00000491028 K7ERJ3 54 aa11.5□□□□□ -0.57
MCF2L-230ENST00000491028 ZNF73O43830 326 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-230ENST00000491028 FAM229AH3BQW9 127 aa11.49□□□□□ -0.57
MCF2L-230ENST00000491028 BCE1O60756 84 aa11.49□□□□□ -0.57
MCF2L-230ENST00000491028 C1orf137Q5JT78 98 aa11.49□□□□□ -0.57
MCF2L-230ENST00000491028 SMIM11BQ8TCY0 68 aa11.49□□□□□ -0.57
MCF2L-230ENST00000491028 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
MCF2L-230ENST00000491028 BATFQ16520 125 aa11.48□□□□□ -0.57
MCF2L-230ENST00000491028 ETDCA0A1B0GVM5 59 aa11.47□□□□□ -0.57
MCF2L-230ENST00000491028 KRTAP4-16G5E9R7 235 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-230ENST00000491028 H7C2G1 150 aa11.46□□□□□ -0.57
MCF2L-230ENST00000491028 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.57
MCF2L-230ENST00000491028 RPL28P46779 137 aaKnown RBP11.46□□□□□ -0.57
MCF2L-230ENST00000491028 Q1RN00 199 aa11.46□□□□□ -0.57
MCF2L-230ENST00000491028 C6orf99Q4VX62 202 aa11.46□□□□□ -0.57
MCF2L-230ENST00000491028 HSPG2P98160 4391 aa11.46□□□□□ -0.58
MCF2L-230ENST00000491028 FAM19A1Q7Z5A9 133 aa11.45□□□□□ -0.58
MCF2L-230ENST00000491028 Q8N1X5 172 aa11.45□□□□□ -0.58
MCF2L-230ENST00000491028 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
MCF2L-230ENST00000491028 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
MCF2L-230ENST00000491028 SNHG12Q9BXW3 62 aa11.44□□□□□ -0.58
MCF2L-230ENST00000491028 H0Y9J4 135 aa11.43□□□□□ -0.58
MCF2L-230ENST00000491028 UBE2AP49459 152 aa11.43□□□□□ -0.58
MCF2L-230ENST00000491028 Q5VSD8 79 aa11.43□□□□□ -0.58
MCF2L-230ENST00000491028 B5MCH6 92 aa11.42□□□□□ -0.58
MCF2L-230ENST00000491028 TSPAN13O95857 204 aa11.42□□□□□ -0.58
MCF2L-230ENST00000491028 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
MCF2L-230ENST00000491028 COX7BP24311 80 aa11.41□□□□□ -0.58
MCF2L-230ENST00000491028 ELOF1P60002 83 aaKnown RBP11.41□□□□□ -0.58
MCF2L-230ENST00000491028 VAMP3Q15836 100 aa11.41□□□□□ -0.58
MCF2L-230ENST00000491028 Q6ZRX8 168 aa11.41□□□□□ -0.58
MCF2L-230ENST00000491028 KRTAP13-1Q8IUC0 172 aa11.41□□□□□ -0.58
MCF2L-230ENST00000491028 PRLHP81277 87 aa11.4□□□□□ -0.58
MCF2L-230ENST00000491028 ZNF861PO60384 105 aa11.39□□□□□ -0.59
MCF2L-230ENST00000491028 FAT1Q14517 4588 aa11.38□□□□□ -0.59
MCF2L-230ENST00000491028 TRIAP1O43715 76 aa11.37□□□□□ -0.59
MCF2L-230ENST00000491028 PSMB2P49721 201 aa11.37□□□□□ -0.59
MCF2L-230ENST00000491028 H0YGX0 51 aa11.35□□□□□ -0.59
MCF2L-230ENST00000491028 COX6CP09669 75 aa11.35□□□□□ -0.59
MCF2L-230ENST00000491028 COL5A1-AS1Q5SY13 56 aa11.35□□□□□ -0.59
MCF2L-230ENST00000491028 DHRS4-AS1Q9P1J3 65 aa11.35□□□□□ -0.59
MCF2L-230ENST00000491028 INAFM2P0DMQ5 153 aa11.34□□□□□ -0.59
MCF2L-230ENST00000491028 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
MCF2L-230ENST00000491028 Q9BRP9 147 aa11.34□□□□□ -0.59
MCF2L-230ENST00000491028 HIGD2AQ9BW72 106 aa11.34□□□□□ -0.59
MCF2L-230ENST00000491028 VPS13BQ7Z7G8 4022 aa11.33□□□□□ -0.6
MCF2L-230ENST00000491028 SMCR5Q8TEV8 140 aa11.33□□□□□ -0.6
MCF2L-230ENST00000491028 TAX1BP3O14907 124 aa11.32□□□□□ -0.6
MCF2L-230ENST00000491028 SLC25A20O43772 301 aa11.31□□□□□ -0.6
MCF2L-230ENST00000491028 LINC00575Q6W349 94 aa11.31□□□□□ -0.6
MCF2L-230ENST00000491028 C9orf118A6NHY6 69 aa11.29□□□□□ -0.6
MCF2L-230ENST00000491028 A0A1B0GX51 115 aa11.28□□□□□ -0.6
MCF2L-230ENST00000491028 H3BUT2 72 aa11.28□□□□□ -0.6
MCF2L-230ENST00000491028 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
MCF2L-230ENST00000491028 LYRM7Q5U5X0 104 aa11.28□□□□□ -0.6
MCF2L-230ENST00000491028 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
MCF2L-230ENST00000491028 hADV29S1A0JD25 119 aa11.27□□□□□ -0.61
MCF2L-230ENST00000491028 SNCGO76070 127 aa11.27□□□□□ -0.61
MCF2L-230ENST00000491028 ERC2-IT1O76042 136 aa11.26□□□□□ -0.61
MCF2L-230ENST00000491028 ZNF706Q9Y5V0 76 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-230ENST00000491028 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
MCF2L-230ENST00000491028 FAM218AQ96MZ4 157 aa11.25□□□□□ -0.61
MCF2L-230ENST00000491028 SRRM2Q9UQ35 2752 aaKnown RBP11.24□□□□□ -0.61
MCF2L-230ENST00000491028 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
MCF2L-230ENST00000491028 LST1O00453 97 aa11.21□□□□□ -0.61
MCF2L-230ENST00000491028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-230ENST00000491028 SPRR4Q96PI1 79 aa11.21□□□□□ -0.61
MCF2L-230ENST00000491028 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.62
MCF2L-230ENST00000491028 FABP2P12104 132 aa11.2□□□□□ -0.62
MCF2L-230ENST00000491028 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
MCF2L-230ENST00000491028 TRBV20-1A0A075B6N2 111 aa11.19□□□□□ -0.62
MCF2L-230ENST00000491028 Q6ZQY7 126 aa11.19□□□□□ -0.62
MCF2L-230ENST00000491028 ST20-AS1Q8NBB2 130 aa11.19□□□□□ -0.62
MCF2L-230ENST00000491028 PKHD1L1Q86WI1 4243 aa11.18□□□□□ -0.62
MCF2L-230ENST00000491028 DNAL4O96015 105 aa11.18□□□□□ -0.62
MCF2L-230ENST00000491028 TRACP01848 142 aa11.18□□□□□ -0.62
MCF2L-230ENST00000491028 ATXN8Q156A1 80 aa11.18□□□□□ -0.62
MCF2L-230ENST00000491028 IGLV5-48A0A075B6I7 105 aa11.17□□□□□ -0.62
MCF2L-230ENST00000491028 TCL1BO95988 128 aa11.17□□□□□ -0.62
MCF2L-230ENST00000491028 OCIAD2Q56VL3 154 aa11.17□□□□□ -0.62
MCF2L-230ENST00000491028 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
MCF2L-230ENST00000491028 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
MCF2L-230ENST00000491028 GHRHP01286 108 aa11.15□□□□□ -0.62
MCF2L-230ENST00000491028 SPRR1BP22528 89 aa11.15□□□□□ -0.62
MCF2L-230ENST00000491028 GAGE2AQ6NT46 116 aa11.15□□□□□ -0.62
MCF2L-230ENST00000491028 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
MCF2L-230ENST00000491028 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-230ENST00000491028 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
MCF2L-230ENST00000491028 FAM229BQ4G0N7 80 aa11.13□□□□□ -0.63
MCF2L-230ENST00000491028 H3BQ85 93 aa11.12□□□□□ -0.63
MCF2L-230ENST00000491028 DEFB105AQ8NG35 78 aa11.12□□□□□ -0.63
MCF2L-230ENST00000491028 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
MCF2L-230ENST00000491028 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
MCF2L-230ENST00000491028 Q8N377 158 aa11.1□□□□□ -0.63
MCF2L-230ENST00000491028 CRYGAP11844 174 aa11.08□□□□□ -0.64
MCF2L-230ENST00000491028 ANAPC11Q9NYG5 84 aa11.08□□□□□ -0.64
MCF2L-230ENST00000491028 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
MCF2L-230ENST00000491028 K7EP34 96 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms