RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FAM229BQ4G0N7 80 aa12.86□□□□□ -0.35
SNAPC3-206ENST00000490969 OCR1Q9BZK8 76 aa12.86□□□□□ -0.35
SNAPC3-206ENST00000490969 A0A0U1RQV1 116 aa12.86□□□□□ -0.35
SNAPC3-206ENST00000490969 PRYO14603 147 aa12.86□□□□□ -0.35
SNAPC3-206ENST00000490969 PRR34Q9NV39 138 aa12.86□□□□□ -0.35
SNAPC3-206ENST00000490969 PKIGQ9Y2B9 76 aa12.86□□□□□ -0.35
SNAPC3-206ENST00000490969 BRK1Q8WUW1 75 aa12.84□□□□□ -0.35
SNAPC3-206ENST00000490969 ANK2Q01484 3957 aa12.83□□□□□ -0.35
SNAPC3-206ENST00000490969 VPREB1P12018 145 aa12.83□□□□□ -0.36
SNAPC3-206ENST00000490969 LELP1Q5T871 98 aa12.83□□□□□ -0.36
SNAPC3-206ENST00000490969 DAD1P61803 113 aa12.83□□□□□ -0.36
SNAPC3-206ENST00000490969 OXLD1Q5BKU9 147 aa12.83□□□□□ -0.36
SNAPC3-206ENST00000490969 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
SNAPC3-206ENST00000490969 NOTCH1P46531 2555 aa12.82□□□□□ -0.36
SNAPC3-206ENST00000490969 MPLKIPQ8TAP9 179 aa12.81□□□□□ -0.36
SNAPC3-206ENST00000490969 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
SNAPC3-206ENST00000490969 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNAPC3-206ENST00000490969 DEFB135Q30KP9 77 aa12.8□□□□□ -0.36
SNAPC3-206ENST00000490969 M0R378 163 aa12.79□□□□□ -0.36
SNAPC3-206ENST00000490969 ESRGQ1W209 222 aa12.78□□□□□ -0.36
SNAPC3-206ENST00000490969 Q6ZTC4 211 aa12.78□□□□□ -0.36
SNAPC3-206ENST00000490969 C3orf84H3BNL1 204 aa12.77□□□□□ -0.37
SNAPC3-206ENST00000490969 HIGD2AQ9BW72 106 aa12.77□□□□□ -0.37
SNAPC3-206ENST00000490969 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.37
SNAPC3-206ENST00000490969 CAMK2N2Q96S95 79 aa12.76□□□□□ -0.37
SNAPC3-206ENST00000490969 HTN3P15516 51 aa12.76□□□□□ -0.37
SNAPC3-206ENST00000490969 KRTAP10-11P60412 298 aa12.76□□□□□ -0.37
SNAPC3-206ENST00000490969 EGFEM1PQ0D2K5 195 aa12.73□□□□□ -0.37
SNAPC3-206ENST00000490969 NBEAL1Q6ZS30 2694 aa12.72□□□□□ -0.37
SNAPC3-206ENST00000490969 Q6ZRU5 148 aa12.7□□□□□ -0.38
SNAPC3-206ENST00000490969 SMIM29Q86T20 159 aa12.68□□□□□ -0.38
SNAPC3-206ENST00000490969 Q8NAQ8 132 aa12.68□□□□□ -0.38
SNAPC3-206ENST00000490969 TENM3Q9P273 2699 aa12.68□□□□□ -0.38
SNAPC3-206ENST00000490969 FAM30AQ9NZY2 134 aa12.68□□□□□ -0.38
SNAPC3-206ENST00000490969 DEFB105AQ8NG35 78 aa12.67□□□□□ -0.38
SNAPC3-206ENST00000490969 C1orf195Q5TG92 126 aa12.66□□□□□ -0.38
SNAPC3-206ENST00000490969 SPART-AS1P0CW21 52 aa12.66□□□□□ -0.38
SNAPC3-206ENST00000490969 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
SNAPC3-206ENST00000490969 Q8N377 158 aa12.66□□□□□ -0.38
SNAPC3-206ENST00000490969 DNAH3Q8TD57 4116 aa12.65□□□□□ -0.38
SNAPC3-206ENST00000490969 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
SNAPC3-206ENST00000490969 IGLV5-48A0A075B6I7 105 aa12.65□□□□□ -0.38
SNAPC3-206ENST00000490969 APOC4P55056 127 aa12.65□□□□□ -0.38
SNAPC3-206ENST00000490969 KRTAP26-1Q6PEX3 210 aa12.63□□□□□ -0.39
SNAPC3-206ENST00000490969 LCE6AA0A183 80 aa12.63□□□□□ -0.39
SNAPC3-206ENST00000490969 F8WDY8 70 aa12.63□□□□□ -0.39
SNAPC3-206ENST00000490969 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
SNAPC3-206ENST00000490969 hDV103S1A0JD37 113 aa12.62□□□□□ -0.39
SNAPC3-206ENST00000490969 Q6ZRP5 223 aa12.62□□□□□ -0.39
SNAPC3-206ENST00000490969 PRB2P02812 416 aaPredicted RBP12.61□□□□□ -0.39
SNAPC3-206ENST00000490969 KCNQ1DNQ9H478 68 aa12.61□□□□□ -0.39
SNAPC3-206ENST00000490969 RETNQ9HD89 108 aa12.61□□□□□ -0.39
SNAPC3-206ENST00000490969 WFDC10BQ8IUB3 73 aa12.6□□□□□ -0.39
SNAPC3-206ENST00000490969 A0A1W2PNM2 257 aa12.59□□□□□ -0.39
SNAPC3-206ENST00000490969 A0A1B0GW54 56 aa12.59□□□□□ -0.39
SNAPC3-206ENST00000490969 MDFIQ99750 246 aa12.57□□□□□ -0.4
SNAPC3-206ENST00000490969 NKAPP1Q8N9T2 125 aa12.57□□□□□ -0.4
SNAPC3-206ENST00000490969 V9GYY9 64 aa12.56□□□□□ -0.4
SNAPC3-206ENST00000490969 C1orf64Q8NEQ6 169 aa12.56□□□□□ -0.4
SNAPC3-206ENST00000490969 C7orf33Q8WU49 177 aa12.56□□□□□ -0.4
SNAPC3-206ENST00000490969 ZCCHC13Q8WW36 166 aaKnown RBP12.56□□□□□ -0.4
SNAPC3-206ENST00000490969 LRCOL1A6NCL2 159 aa12.55□□□□□ -0.4
SNAPC3-206ENST00000490969 SERTAD4-AS1Q5TG53 156 aa12.54□□□□□ -0.4
SNAPC3-206ENST00000490969 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
SNAPC3-206ENST00000490969 TNP2Q05952 138 aa12.53□□□□□ -0.4
SNAPC3-206ENST00000490969 Q1T7F1 81 aa12.53□□□□□ -0.4
SNAPC3-206ENST00000490969 ETDCA0A1B0GVM5 59 aa12.52□□□□□ -0.4
SNAPC3-206ENST00000490969 Q8NBF4 154 aa12.52□□□□□ -0.4
SNAPC3-206ENST00000490969 DHRS4-AS1Q9P1J3 65 aa12.52□□□□□ -0.4
SNAPC3-206ENST00000490969 DSCR10P59022 87 aa12.52□□□□□ -0.41
SNAPC3-206ENST00000490969 SYCNQ0VAF6 134 aa12.51□□□□□ -0.41
SNAPC3-206ENST00000490969 Q6ZRX8 168 aa12.51□□□□□ -0.41
SNAPC3-206ENST00000490969 Q9BRP9 147 aa12.5□□□□□ -0.41
SNAPC3-206ENST00000490969 K7EQZ3 153 aa12.49□□□□□ -0.41
SNAPC3-206ENST00000490969 SPRR4Q96PI1 79 aa12.49□□□□□ -0.41
SNAPC3-206ENST00000490969 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.48□□□□□ -0.41
SNAPC3-206ENST00000490969 PRR15Q8IV56 129 aa12.48□□□□□ -0.41
SNAPC3-206ENST00000490969 ST20-AS1Q8NBB2 130 aa12.47□□□□□ -0.41
SNAPC3-206ENST00000490969 RPL37AP8A6NKH3 93 aa12.46□□□□□ -0.42
SNAPC3-206ENST00000490969 KRTAP4-16G5E9R7 235 aaPredicted RBP12.46□□□□□ -0.42
SNAPC3-206ENST00000490969 IGKV2D-24A0A075B6R9 120 aa12.45□□□□□ -0.42
SNAPC3-206ENST00000490969 CYP4F30PQ9H0H9 118 aa12.44□□□□□ -0.42
SNAPC3-206ENST00000490969 SEC61GP60059 68 aa12.43□□□□□ -0.42
SNAPC3-206ENST00000490969 H3BNG1 76 aa12.42□□□□□ -0.42
SNAPC3-206ENST00000490969 PRR4Q16378 134 aa12.42□□□□□ -0.42
SNAPC3-206ENST00000490969 HUWE1Q7Z6Z7 4374 aaKnown RBP12.42□□□□□ -0.42
SNAPC3-206ENST00000490969 HCG22E2RYF7 251 aa12.42□□□□□ -0.42
SNAPC3-206ENST00000490969 PSPHP1O15172 72 aa12.42□□□□□ -0.42
SNAPC3-206ENST00000490969 IGLV1-50A0A075B6I6 118 aa12.41□□□□□ -0.42
SNAPC3-206ENST00000490969 SPRR1AP35321 89 aa12.41□□□□□ -0.42
SNAPC3-206ENST00000490969 TRAV22A0A0B4J277 110 aa12.4□□□□□ -0.42
SNAPC3-206ENST00000490969 K7EIL1 84 aa12.4□□□□□ -0.42
SNAPC3-206ENST00000490969 PLA2G2DQ9UNK4 145 aa12.4□□□□□ -0.42
SNAPC3-206ENST00000490969 FAM168BA1KXE4 195 aa12.39□□□□□ -0.43
SNAPC3-206ENST00000490969 COL7A1Q02388 2944 aa12.39□□□□□ -0.43
SNAPC3-206ENST00000490969 TLX1NBP0CAT3 122 aa12.37□□□□□ -0.43
SNAPC3-206ENST00000490969 LINC01556Q5JQF7 62 aa12.36□□□□□ -0.43
SNAPC3-206ENST00000490969 PSCAO43653 123 aa12.36□□□□□ -0.43
SNAPC3-206ENST00000490969 NDUFB1O75438 58 aa12.36□□□□□ -0.43
SNAPC3-206ENST00000490969 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms