RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TAL2Q16559 108 aa9.64□□□□□ -0.87
TRA2A-208ENST00000490942 FLG2Q5D862 2391 aaPredicted RBP9.64□□□□□ -0.87
TRA2A-208ENST00000490942 KRTAP4-16G5E9R7 235 aaPredicted RBP9.63□□□□□ -0.87
TRA2A-208ENST00000490942 OXTP01178 125 aa9.63□□□□□ -0.87
TRA2A-208ENST00000490942 C2orf91Q6ZV80 131 aa9.63□□□□□ -0.87
TRA2A-208ENST00000490942 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
TRA2A-208ENST00000490942 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
TRA2A-208ENST00000490942 UBE2AP49459 152 aa9.62□□□□□ -0.87
TRA2A-208ENST00000490942 UQCR10Q9UDW1 63 aa9.62□□□□□ -0.87
TRA2A-208ENST00000490942 TRAV13-2A0A0B4J235 113 aa9.61□□□□□ -0.87
TRA2A-208ENST00000490942 LOC105371267A0A1B0GV96 52 aa9.61□□□□□ -0.87
TRA2A-208ENST00000490942 FAM19A1Q7Z5A9 133 aa9.61□□□□□ -0.87
TRA2A-208ENST00000490942 A4D1N5 150 aa9.6□□□□□ -0.87
TRA2A-208ENST00000490942 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
TRA2A-208ENST00000490942 OR13C6PQ8NH95 151 aa9.6□□□□□ -0.87
TRA2A-208ENST00000490942 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.87
TRA2A-208ENST00000490942 ZNF73O43830 326 aaPredicted RBP9.59□□□□□ -0.87
TRA2A-208ENST00000490942 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
TRA2A-208ENST00000490942 PKHD1L1Q86WI1 4243 aa9.58□□□□□ -0.88
TRA2A-208ENST00000490942 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
TRA2A-208ENST00000490942 PRLHP81277 87 aa9.57□□□□□ -0.88
TRA2A-208ENST00000490942 A6NDN8 102 aa9.56□□□□□ -0.88
TRA2A-208ENST00000490942 B5MCH6 92 aa9.56□□□□□ -0.88
TRA2A-208ENST00000490942 Q6ZRX8 168 aa9.56□□□□□ -0.88
TRA2A-208ENST00000490942 LINC01600Q96MT4 127 aa9.56□□□□□ -0.88
TRA2A-208ENST00000490942 TRBV7-6A0A0J9YX20 115 aa9.55□□□□□ -0.88
TRA2A-208ENST00000490942 LOC100996750A0A140TA64 210 aa9.55□□□□□ -0.88
TRA2A-208ENST00000490942 CEND1Q8N111 149 aa9.55□□□□□ -0.88
TRA2A-208ENST00000490942 KRTAP4-6Q9BYQ5 205 aa9.55□□□□□ -0.88
TRA2A-208ENST00000490942 TMEM238LA0A1B0GVL6 79 aa9.54□□□□□ -0.88
TRA2A-208ENST00000490942 A6NJY4 79 aa9.54□□□□□ -0.88
TRA2A-208ENST00000490942 HSD52Q0P140 79 aa9.54□□□□□ -0.88
TRA2A-208ENST00000490942 MYCBP2O75592 4640 aa9.54□□□□□ -0.88
TRA2A-208ENST00000490942 A0A0B4J2C4 111 aa9.52□□□□□ -0.89
TRA2A-208ENST00000490942 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
TRA2A-208ENST00000490942 C6orf99Q4VX62 202 aa9.51□□□□□ -0.89
TRA2A-208ENST00000490942 HIGD2AQ9BW72 106 aa9.51□□□□□ -0.89
TRA2A-208ENST00000490942 ZNF706Q9Y5V0 76 aaPredicted RBP9.51□□□□□ -0.89
TRA2A-208ENST00000490942 ELOF1P60002 83 aaKnown RBP9.5□□□□□ -0.89
TRA2A-208ENST00000490942 SMCR5Q8TEV8 140 aa9.5□□□□□ -0.89
TRA2A-208ENST00000490942 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
TRA2A-208ENST00000490942 CFC1BP0CG36 223 aa9.49□□□□□ -0.89
TRA2A-208ENST00000490942 CFC1P0CG37 223 aa9.49□□□□□ -0.89
TRA2A-208ENST00000490942 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
TRA2A-208ENST00000490942 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
TRA2A-208ENST00000490942 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
TRA2A-208ENST00000490942 COX7BP24311 80 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 FAM229BQ4G0N7 80 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 RAB37Q96AX2 223 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 C12orf57Q99622 126 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 Q9BRP9 147 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
TRA2A-208ENST00000490942 RPL13AP40429 203 aaKnown RBP9.47□□□□□ -0.89
TRA2A-208ENST00000490942 TSTD3H0UI37 97 aa9.46□□□□□ -0.9
TRA2A-208ENST00000490942 FXYD2P54710 66 aa9.46□□□□□ -0.9
TRA2A-208ENST00000490942 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
TRA2A-208ENST00000490942 VAMP3Q15836 100 aa9.46□□□□□ -0.9
TRA2A-208ENST00000490942 SPRR4Q96PI1 79 aa9.46□□□□□ -0.9
TRA2A-208ENST00000490942 PRO1933Q9H354 126 aa9.46□□□□□ -0.9
TRA2A-208ENST00000490942 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
TRA2A-208ENST00000490942 NHP2Q9NX24 153 aaKnown RBP9.44□□□□□ -0.9
TRA2A-208ENST00000490942 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
TRA2A-208ENST00000490942 CRYGAP11844 174 aa9.43□□□□□ -0.9
TRA2A-208ENST00000490942 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
TRA2A-208ENST00000490942 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
TRA2A-208ENST00000490942 ERC2-IT1O76042 136 aa9.41□□□□□ -0.9
TRA2A-208ENST00000490942 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
TRA2A-208ENST00000490942 M0R143 59 aa9.4□□□□□ -0.9
TRA2A-208ENST00000490942 H0YGX0 51 aa9.38□□□□□ -0.91
TRA2A-208ENST00000490942 SLC25A20O43772 301 aa9.38□□□□□ -0.91
TRA2A-208ENST00000490942 A0A087X002 238 aa9.37□□□□□ -0.91
TRA2A-208ENST00000490942 SPRR1BP22528 89 aa9.37□□□□□ -0.91
TRA2A-208ENST00000490942 CTAG1AP78358 180 aa9.37□□□□□ -0.91
TRA2A-208ENST00000490942 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
TRA2A-208ENST00000490942 H7C2G1 150 aa9.36□□□□□ -0.91
TRA2A-208ENST00000490942 Q1RN00 199 aa9.36□□□□□ -0.91
TRA2A-208ENST00000490942 GAGE2AQ6NT46 116 aa9.36□□□□□ -0.91
TRA2A-208ENST00000490942 ANAPC11Q9NYG5 84 aa9.35□□□□□ -0.91
TRA2A-208ENST00000490942 TNXBP22105 4242 aa9.35□□□□□ -0.91
TRA2A-208ENST00000490942 IGLV5-48A0A075B6I7 105 aa9.34□□□□□ -0.91
TRA2A-208ENST00000490942 hADV29S1A0JD25 119 aa9.33□□□□□ -0.92
TRA2A-208ENST00000490942 SNCGO76070 127 aa9.33□□□□□ -0.92
TRA2A-208ENST00000490942 KRTAP13-2Q52LG2 175 aa9.33□□□□□ -0.92
TRA2A-208ENST00000490942 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
TRA2A-208ENST00000490942 TYMSOSQ8TAI1 123 aa9.33□□□□□ -0.92
TRA2A-208ENST00000490942 TEX49A0A1B0GTD5 131 aa9.32□□□□□ -0.92
TRA2A-208ENST00000490942 A0A1B0GX51 115 aa9.32□□□□□ -0.92
TRA2A-208ENST00000490942 K7ERJ3 54 aa9.32□□□□□ -0.92
TRA2A-208ENST00000490942 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
TRA2A-208ENST00000490942 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.31□□□□□ -0.92
TRA2A-208ENST00000490942 COX6CP09669 75 aa9.3□□□□□ -0.92
TRA2A-208ENST00000490942 TSPAN13O95857 204 aa9.29□□□□□ -0.92
TRA2A-208ENST00000490942 SSBP3-AS1Q7Z2R9 100 aa9.29□□□□□ -0.92
TRA2A-208ENST00000490942 PPDPFLQ8WWR9 84 aa9.29□□□□□ -0.92
TRA2A-208ENST00000490942 TRIAP1O43715 76 aa9.28□□□□□ -0.92
TRA2A-208ENST00000490942 LINC01547P58512 204 aaPredicted RBP9.28□□□□□ -0.92
TRA2A-208ENST00000490942 OCIAD2Q56VL3 154 aa9.28□□□□□ -0.92
TRA2A-208ENST00000490942 LAMTOR3Q9UHA4 124 aa9.28□□□□□ -0.92
TRA2A-208ENST00000490942 GHRHP01286 108 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms