RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 H3BRM9 83 aa4.54□□□□□ -1.68
USP39-216ENST00000490193 Q8N377 158 aa4.54□□□□□ -1.68
USP39-216ENST00000490193 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
USP39-216ENST00000490193 PMVKQ15126 192 aa4.53□□□□□ -1.68
USP39-216ENST00000490193 LINC00483Q53H64 154 aa4.53□□□□□ -1.68
USP39-216ENST00000490193 MT-ND4LP03901 98 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 IGLC3P0DOY3 106 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 SPRR1AP35321 89 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 FABP9Q0Z7S8 132 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 PYY3Q5JQD4 70 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 SFTA2Q6UW10 78 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 PRO1933Q9H354 126 aa4.52□□□□□ -1.69
USP39-216ENST00000490193 KRTAP4-16G5E9R7 235 aaPredicted RBP4.51□□□□□ -1.69
USP39-216ENST00000490193 PRYO14603 147 aa4.51□□□□□ -1.69
USP39-216ENST00000490193 SLC25A20O43772 301 aa4.51□□□□□ -1.69
USP39-216ENST00000490193 HSBP1O75506 76 aa4.51□□□□□ -1.69
USP39-216ENST00000490193 UBE2V1Q13404 147 aa4.51□□□□□ -1.69
USP39-216ENST00000490193 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
USP39-216ENST00000490193 ZNF22P17026 224 aaPredicted RBP4.5□□□□□ -1.69
USP39-216ENST00000490193 S100A2P29034 98 aa4.5□□□□□ -1.69
USP39-216ENST00000490193 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
USP39-216ENST00000490193 SMCR5Q8TEV8 140 aa4.5□□□□□ -1.69
USP39-216ENST00000490193 ZNF625Q96I27 306 aaPredicted RBP4.5□□□□□ -1.69
USP39-216ENST00000490193 KCNQ1DNQ9H478 68 aa4.5□□□□□ -1.69
USP39-216ENST00000490193 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
USP39-216ENST00000490193 MOBPQ13875 183 aa4.48□□□□□ -1.69
USP39-216ENST00000490193 SIGMAR1Q99720 223 aa4.48□□□□□ -1.69
USP39-216ENST00000490193 TRAV9-1A0A075B6T8 112 aa4.47□□□□□ -1.69
USP39-216ENST00000490193 ETDCA0A1B0GVM5 59 aa4.47□□□□□ -1.69
USP39-216ENST00000490193 COL5A1-AS1Q5SY13 56 aa4.47□□□□□ -1.69
USP39-216ENST00000490193 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
USP39-216ENST00000490193 TMEM218A2RU14 115 aa4.46□□□□□ -1.7
USP39-216ENST00000490193 APOC3P02656 99 aa4.46□□□□□ -1.7
USP39-216ENST00000490193 LINC00158P58513 81 aa4.46□□□□□ -1.7
USP39-216ENST00000490193 GAGE2AQ6NT46 116 aa4.46□□□□□ -1.7
USP39-216ENST00000490193 HSPB8Q9UJY1 196 aa4.46□□□□□ -1.7
USP39-216ENST00000490193 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 A0A096LNJ9 63 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 C11orf86A6NJI1 115 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 B5MCH6 92 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 ERC2-IT1O76042 136 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 PCOTHQ58A44 107 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 SMCO4Q9NRQ5 59 aa4.45□□□□□ -1.7
USP39-216ENST00000490193 TRBV10-3A0A0K0K1G6 114 aa4.44□□□□□ -1.7
USP39-216ENST00000490193 C9orf118A6NHY6 69 aa4.44□□□□□ -1.7
USP39-216ENST00000490193 NCR3O14931 201 aa4.44□□□□□ -1.7
USP39-216ENST00000490193 TAL2Q16559 108 aa4.44□□□□□ -1.7
USP39-216ENST00000490193 OR13C6PQ8NH95 151 aa4.44□□□□□ -1.7
USP39-216ENST00000490193 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
USP39-216ENST00000490193 SMIM13P0DJ93 91 aa4.43□□□□□ -1.7
USP39-216ENST00000490193 NDUFA6P56556 154 aa4.43□□□□□ -1.7
USP39-216ENST00000490193 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
USP39-216ENST00000490193 Q9BRP9 147 aa4.43□□□□□ -1.7
USP39-216ENST00000490193 Q6ZRX8 168 aa4.42□□□□□ -1.7
USP39-216ENST00000490193 MIR7-3HGQ8N6C7 128 aa4.42□□□□□ -1.7
USP39-216ENST00000490193 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
USP39-216ENST00000490193 TMEM223A0PJW6 202 aa4.41□□□□□ -1.7
USP39-216ENST00000490193 HBDP02042 147 aa4.41□□□□□ -1.7
USP39-216ENST00000490193 BAGE3Q86Y29 109 aa4.41□□□□□ -1.7
USP39-216ENST00000490193 SVBPQ8N300 66 aa4.41□□□□□ -1.7
USP39-216ENST00000490193 LOC107984156A0A0G2JMH3 177 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 TRBV10-2A0A0K0K1G8 114 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 COLCA2A8K830 154 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 M0R2T5 61 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 RHEBQ15382 184 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 C9orf153Q5TBE3 101 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 ARL17AQ8IVW1 177 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 LIMD2Q9BT23 127 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
USP39-216ENST00000490193 JOSD1Q15040 202 aaPredicted RBP4.39□□□□□ -1.71
USP39-216ENST00000490193 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
USP39-216ENST00000490193 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
USP39-216ENST00000490193 C9orf92A6NGG3 77 aa4.38□□□□□ -1.71
USP39-216ENST00000490193 C18orf32Q8TCD1 76 aa4.38□□□□□ -1.71
USP39-216ENST00000490193 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
USP39-216ENST00000490193 IGLV6-57P01721 117 aa4.37□□□□□ -1.71
USP39-216ENST00000490193 SPRR1BP22528 89 aa4.37□□□□□ -1.71
USP39-216ENST00000490193 PMCHL1Q16048 86 aa4.37□□□□□ -1.71
USP39-216ENST00000490193 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
USP39-216ENST00000490193 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
USP39-216ENST00000490193 BATFQ16520 125 aa4.36□□□□□ -1.71
USP39-216ENST00000490193 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
USP39-216ENST00000490193 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
USP39-216ENST00000490193 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
USP39-216ENST00000490193 NDUFC2O95298 119 aa4.35□□□□□ -1.71
USP39-216ENST00000490193 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
USP39-216ENST00000490193 ST20-AS1Q8NBB2 130 aa4.35□□□□□ -1.71
USP39-216ENST00000490193 USH2AO75445 5202 aa4.35□□□□□ -1.71
USP39-216ENST00000490193 CD164Q04900 197 aa4.34□□□□□ -1.71
USP39-216ENST00000490193 C10orf91Q5T1B1 145 aa4.34□□□□□ -1.71
USP39-216ENST00000490193 Q5XG85 94 aa4.34□□□□□ -1.71
USP39-216ENST00000490193 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
USP39-216ENST00000490193 HIST3H2BBQ8N257 126 aa4.34□□□□□ -1.71
USP39-216ENST00000490193 MIEN1Q9BRT3 115 aa4.34□□□□□ -1.71
USP39-216ENST00000490193 J3KT08 172 aa4.33□□□□□ -1.72
USP39-216ENST00000490193 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
USP39-216ENST00000490193 HSD52Q0P140 79 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms