RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
CLIC4-202ENST00000488683 DSCR8Q96T75 97 aa8.31□□□□□ -1.08
CLIC4-202ENST00000488683 UBL5Q9BZL1 73 aa8.31□□□□□ -1.08
CLIC4-202ENST00000488683 GHRHP01286 108 aa8.3□□□□□ -1.08
CLIC4-202ENST00000488683 LINC01556Q5JQF7 62 aa8.3□□□□□ -1.08
CLIC4-202ENST00000488683 Q8N9L7 120 aa8.3□□□□□ -1.08
CLIC4-202ENST00000488683 Q6ZVQ6 151 aa8.29□□□□□ -1.08
CLIC4-202ENST00000488683 M0R378 163 aa8.28□□□□□ -1.08
CLIC4-202ENST00000488683 TRAV10A0A0B4J240 114 aa8.28□□□□□ -1.08
CLIC4-202ENST00000488683 LINC01547P58512 204 aaPredicted RBP8.28□□□□□ -1.08
CLIC4-202ENST00000488683 CRYGAP11844 174 aa8.27□□□□□ -1.09
CLIC4-202ENST00000488683 SYCNQ0VAF6 134 aa8.27□□□□□ -1.09
CLIC4-202ENST00000488683 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
CLIC4-202ENST00000488683 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.09
CLIC4-202ENST00000488683 SERP2Q8N6R1 65 aa8.26□□□□□ -1.09
CLIC4-202ENST00000488683 LINC00588Q9Y4M8 146 aa8.26□□□□□ -1.09
CLIC4-202ENST00000488683 C3orf84H3BNL1 204 aa8.25□□□□□ -1.09
CLIC4-202ENST00000488683 TRBV7-4A0A0J9YYF1 115 aa8.25□□□□□ -1.09
CLIC4-202ENST00000488683 C7orf33Q8WU49 177 aa8.25□□□□□ -1.09
CLIC4-202ENST00000488683 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
CLIC4-202ENST00000488683 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
CLIC4-202ENST00000488683 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
CLIC4-202ENST00000488683 DNAH10OSP0CZ25 163 aa8.23□□□□□ -1.09
CLIC4-202ENST00000488683 C20orf197Q8N268 126 aa8.23□□□□□ -1.09
CLIC4-202ENST00000488683 NKAPP1Q8N9T2 125 aa8.23□□□□□ -1.09
CLIC4-202ENST00000488683 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
CLIC4-202ENST00000488683 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
CLIC4-202ENST00000488683 KRTAP7-1Q8IUC3 87 aa8.22□□□□□ -1.09
CLIC4-202ENST00000488683 SNURFQ9Y675 71 aa8.21□□□□□ -1.1
CLIC4-202ENST00000488683 H3BQ85 93 aa8.2□□□□□ -1.1
CLIC4-202ENST00000488683 PDE6GP18545 87 aa8.2□□□□□ -1.1
CLIC4-202ENST00000488683 J3KT08 172 aa8.19□□□□□ -1.1
CLIC4-202ENST00000488683 BPY2O14599 106 aa8.19□□□□□ -1.1
CLIC4-202ENST00000488683 KCNQ1DNQ9H478 68 aa8.19□□□□□ -1.1
CLIC4-202ENST00000488683 OXTP01178 125 aa8.18□□□□□ -1.1
CLIC4-202ENST00000488683 Q9BRP9 147 aa8.18□□□□□ -1.1
CLIC4-202ENST00000488683 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
CLIC4-202ENST00000488683 Q8N377 158 aa8.18□□□□□ -1.1
CLIC4-202ENST00000488683 F8WDY8 70 aa8.17□□□□□ -1.1
CLIC4-202ENST00000488683 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
CLIC4-202ENST00000488683 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
CLIC4-202ENST00000488683 IGKV2-24A0A0C4DH68 120 aa8.16□□□□□ -1.1
CLIC4-202ENST00000488683 K7EIL1 84 aa8.16□□□□□ -1.1
CLIC4-202ENST00000488683 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
CLIC4-202ENST00000488683 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
CLIC4-202ENST00000488683 RMI2Q96E14 147 aa8.15□□□□□ -1.1
CLIC4-202ENST00000488683 PLECQ15149 4684 aaKnown RBP8.15□□□□□ -1.11
CLIC4-202ENST00000488683 CXCL6P80162 114 aa8.15□□□□□ -1.11
CLIC4-202ENST00000488683 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
CLIC4-202ENST00000488683 KRTAP4-16G5E9R7 235 aaPredicted RBP8.14□□□□□ -1.11
CLIC4-202ENST00000488683 TMEM258P61165 79 aa8.13□□□□□ -1.11
CLIC4-202ENST00000488683 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CLIC4-202ENST00000488683 Q6ZRX8 168 aa8.12□□□□□ -1.11
CLIC4-202ENST00000488683 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
CLIC4-202ENST00000488683 ETDCA0A1B0GVM5 59 aa8.11□□□□□ -1.11
CLIC4-202ENST00000488683 UBE2BP63146 152 aa8.11□□□□□ -1.11
CLIC4-202ENST00000488683 NREPQ16612 68 aa8.1□□□□□ -1.11
CLIC4-202ENST00000488683 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
CLIC4-202ENST00000488683 SPRR1AP35321 89 aa8.09□□□□□ -1.11
CLIC4-202ENST00000488683 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
CLIC4-202ENST00000488683 PRLHP81277 87 aa8.09□□□□□ -1.11
CLIC4-202ENST00000488683 IGLV5-37A0A075B6J1 123 aa8.09□□□□□ -1.11
CLIC4-202ENST00000488683 CHTF8P0CG12 524 aa8.09□□□□□ -1.11
CLIC4-202ENST00000488683 A0A1W2PNM2 257 aa8.09□□□□□ -1.12
CLIC4-202ENST00000488683 TRAV7A0A075B6U4 112 aa8.08□□□□□ -1.12
CLIC4-202ENST00000488683 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
CLIC4-202ENST00000488683 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
CLIC4-202ENST00000488683 MRPL55Q7Z7F7 128 aaKnown RBP8.08□□□□□ -1.12
CLIC4-202ENST00000488683 IGLV5-48A0A075B6I7 105 aa8.08□□□□□ -1.12
CLIC4-202ENST00000488683 A0A096LNI7 61 aa8.08□□□□□ -1.12
CLIC4-202ENST00000488683 PRYO14603 147 aa8.08□□□□□ -1.12
CLIC4-202ENST00000488683 IGKV4-1P06312 121 aa8.07□□□□□ -1.12
CLIC4-202ENST00000488683 DHRS4-AS1Q9P1J3 65 aa8.07□□□□□ -1.12
CLIC4-202ENST00000488683 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
CLIC4-202ENST00000488683 H7BZZ5 65 aa8.05□□□□□ -1.12
CLIC4-202ENST00000488683 C1orf137Q5JT78 98 aa8.05□□□□□ -1.12
CLIC4-202ENST00000488683 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
CLIC4-202ENST00000488683 F8WEM9 126 aa8.05□□□□□ -1.12
CLIC4-202ENST00000488683 TNP2Q05952 138 aa8.05□□□□□ -1.12
CLIC4-202ENST00000488683 BCE1O60756 84 aa8.04□□□□□ -1.12
CLIC4-202ENST00000488683 PSCAO43653 123 aa8.03□□□□□ -1.12
CLIC4-202ENST00000488683 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
CLIC4-202ENST00000488683 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
CLIC4-202ENST00000488683 FRAS1Q86XX4 4008 aa8.03□□□□□ -1.12
CLIC4-202ENST00000488683 FAM30AQ9NZY2 134 aa8.02□□□□□ -1.12
CLIC4-202ENST00000488683 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 Q5XG85 94 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
CLIC4-202ENST00000488683 KMT2AQ03164 3969 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 SMIM29Q86T20 159 aa8.01□□□□□ -1.13
CLIC4-202ENST00000488683 UBE2DNLQ8IWF7 75 aa8□□□□□ -1.13
CLIC4-202ENST00000488683 C5orf47Q569G3 176 aa8□□□□□ -1.13
CLIC4-202ENST00000488683 PRKDCP78527 4128 aaKnown RBP7.99□□□□□ -1.13
CLIC4-202ENST00000488683 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
CLIC4-202ENST00000488683 Q8NBF4 154 aa7.98□□□□□ -1.13
CLIC4-202ENST00000488683 LINC00476Q8WZB0 136 aa7.98□□□□□ -1.13
CLIC4-202ENST00000488683 TGP01266 2768 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms