RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 NMUP48645 174 aa10.34□□□□□ -0.75
GGPS1-206ENST00000488594 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
GGPS1-206ENST00000488594 CBY1Q9Y3M2 126 aa10.34□□□□□ -0.75
GGPS1-206ENST00000488594 J3QQQ9 107 aa10.33□□□□□ -0.76
GGPS1-206ENST00000488594 HSBP1O75506 76 aa10.33□□□□□ -0.76
GGPS1-206ENST00000488594 LORP23490 312 aaPredicted RBP10.33□□□□□ -0.76
GGPS1-206ENST00000488594 C9orf92A6NGG3 77 aa10.32□□□□□ -0.76
GGPS1-206ENST00000488594 H0Y8G0 127 aa10.32□□□□□ -0.76
GGPS1-206ENST00000488594 PLNP26678 52 aa10.32□□□□□ -0.76
GGPS1-206ENST00000488594 SPRR1BP22528 89 aa10.31□□□□□ -0.76
GGPS1-206ENST00000488594 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-206ENST00000488594 HERVK_113P61574 105 aa10.31□□□□□ -0.76
GGPS1-206ENST00000488594 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
GGPS1-206ENST00000488594 HRCT1Q6UXD1 115 aa10.29□□□□□ -0.76
GGPS1-206ENST00000488594 SNAPINO95295 136 aa10.27□□□□□ -0.76
GGPS1-206ENST00000488594 LAMTOR3Q9UHA4 124 aa10.27□□□□□ -0.76
GGPS1-206ENST00000488594 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
GGPS1-206ENST00000488594 APOC3P02656 99 aa10.26□□□□□ -0.77
GGPS1-206ENST00000488594 SOSTDC1Q6X4U4 206 aa10.26□□□□□ -0.77
GGPS1-206ENST00000488594 DHRS4-AS1Q9P1J3 65 aa10.26□□□□□ -0.77
GGPS1-206ENST00000488594 SVBPQ8N300 66 aa10.26□□□□□ -0.77
GGPS1-206ENST00000488594 M0R2T5 61 aa10.25□□□□□ -0.77
GGPS1-206ENST00000488594 DPM2O94777 84 aa10.25□□□□□ -0.77
GGPS1-206ENST00000488594 CD164Q04900 197 aa10.25□□□□□ -0.77
GGPS1-206ENST00000488594 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
GGPS1-206ENST00000488594 EIF4EBP3O60516 100 aaPredicted RBP10.24□□□□□ -0.77
GGPS1-206ENST00000488594 NPC2P61916 151 aa10.24□□□□□ -0.77
GGPS1-206ENST00000488594 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
GGPS1-206ENST00000488594 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
GGPS1-206ENST00000488594 A0A0J9YXY3 114 aa10.22□□□□□ -0.77
GGPS1-206ENST00000488594 IGKCP01834 107 aa10.22□□□□□ -0.77
GGPS1-206ENST00000488594 HSPB8Q9UJY1 196 aa10.22□□□□□ -0.77
GGPS1-206ENST00000488594 Q5XG85 94 aa10.2□□□□□ -0.78
GGPS1-206ENST00000488594 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
GGPS1-206ENST00000488594 PRO1933Q9H354 126 aa10.2□□□□□ -0.78
GGPS1-206ENST00000488594 SPANXCQ9NY87 97 aa10.2□□□□□ -0.78
GGPS1-206ENST00000488594 COX6B2Q6YFQ2 88 aa10.19□□□□□ -0.78
GGPS1-206ENST00000488594 H7C2G1 150 aa10.18□□□□□ -0.78
GGPS1-206ENST00000488594 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
GGPS1-206ENST00000488594 RPL37P61927 97 aaKnown RBP10.17□□□□□ -0.78
GGPS1-206ENST00000488594 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
GGPS1-206ENST00000488594 SERF1AO75920 110 aa10.16□□□□□ -0.78
GGPS1-206ENST00000488594 TAL2Q16559 108 aa10.16□□□□□ -0.78
GGPS1-206ENST00000488594 E9PLD3 99 aa10.15□□□□□ -0.78
GGPS1-206ENST00000488594 ELOF1P60002 83 aaKnown RBP10.15□□□□□ -0.78
GGPS1-206ENST00000488594 Q1RN00 199 aa10.15□□□□□ -0.78
GGPS1-206ENST00000488594 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
GGPS1-206ENST00000488594 TEX49A0A1B0GTD5 131 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 FABP4P15090 132 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 COX7BP24311 80 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 LINC00310P59036 64 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 AKR1D1P51857 326 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 DEFB105AQ8NG35 78 aa10.14□□□□□ -0.79
GGPS1-206ENST00000488594 TIMM17BO60830 172 aa10.12□□□□□ -0.79
GGPS1-206ENST00000488594 TRGC2P03986 189 aa10.12□□□□□ -0.79
GGPS1-206ENST00000488594 C6orf99Q4VX62 202 aa10.12□□□□□ -0.79
GGPS1-206ENST00000488594 LITAFQ99732 161 aa10.12□□□□□ -0.79
GGPS1-206ENST00000488594 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
GGPS1-206ENST00000488594 TRBV7-6A0A0J9YX20 115 aa10.07□□□□□ -0.8
GGPS1-206ENST00000488594 SMIM29Q86T20 159 aa10.07□□□□□ -0.8
GGPS1-206ENST00000488594 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
GGPS1-206ENST00000488594 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
GGPS1-206ENST00000488594 TCL1BO95988 128 aa10.03□□□□□ -0.8
GGPS1-206ENST00000488594 FLGP20930 4061 aaPredicted RBP10.02□□□□□ -0.8
GGPS1-206ENST00000488594 ZNF815PA8K554 130 aa10.01□□□□□ -0.81
GGPS1-206ENST00000488594 A0A0G2JQZ4 141 aa10.01□□□□□ -0.81
GGPS1-206ENST00000488594 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
GGPS1-206ENST00000488594 A4D1N5 150 aa9.97□□□□□ -0.81
GGPS1-206ENST00000488594 COPS9Q8WXC6 57 aa9.96□□□□□ -0.82
GGPS1-206ENST00000488594 NHP2Q9NX24 153 aaKnown RBP9.95□□□□□ -0.82
GGPS1-206ENST00000488594 KRTAP9-7A8MTY7 169 aa9.94□□□□□ -0.82
GGPS1-206ENST00000488594 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
GGPS1-206ENST00000488594 Q6Q795 121 aa9.94□□□□□ -0.82
GGPS1-206ENST00000488594 A6NDN8 102 aa9.93□□□□□ -0.82
GGPS1-206ENST00000488594 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.93□□□□□ -0.82
GGPS1-206ENST00000488594 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
GGPS1-206ENST00000488594 TTTY13Q9BZ97 58 aa9.93□□□□□ -0.82
GGPS1-206ENST00000488594 F8WEM9 126 aa9.91□□□□□ -0.82
GGPS1-206ENST00000488594 CFC1P0CG37 223 aa9.91□□□□□ -0.82
GGPS1-206ENST00000488594 IFITM1P13164 125 aa9.9□□□□□ -0.82
GGPS1-206ENST00000488594 PET117Q6UWS5 81 aa9.9□□□□□ -0.82
GGPS1-206ENST00000488594 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
GGPS1-206ENST00000488594 Q75L30 129 aa9.9□□□□□ -0.82
GGPS1-206ENST00000488594 PCP2Q8IVA1 136 aa9.89□□□□□ -0.83
GGPS1-206ENST00000488594 Q6ZVH6 145 aa9.88□□□□□ -0.83
GGPS1-206ENST00000488594 COLCA2A8K830 154 aa9.87□□□□□ -0.83
GGPS1-206ENST00000488594 Q6JHZ5 121 aa9.86□□□□□ -0.83
GGPS1-206ENST00000488594 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
GGPS1-206ENST00000488594 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
GGPS1-206ENST00000488594 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
GGPS1-206ENST00000488594 SMIM11BQ8TCY0 68 aa9.84□□□□□ -0.83
GGPS1-206ENST00000488594 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
GGPS1-206ENST00000488594 MUSTN1Q8IVN3 82 aa9.82□□□□□ -0.84
GGPS1-206ENST00000488594 C20orf202A1L168 122 aa9.81□□□□□ -0.84
GGPS1-206ENST00000488594 VAMP3Q15836 100 aa9.81□□□□□ -0.84
GGPS1-206ENST00000488594 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
GGPS1-206ENST00000488594 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms