RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DNAH8Q96JB1 4490 aa6.93□□□□□ -1.3
HDLBP-242ENST00000488013 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
HDLBP-242ENST00000488013 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
HDLBP-242ENST00000488013 RPL13AP40429 203 aaKnown RBP6.92□□□□□ -1.3
HDLBP-242ENST00000488013 VAMP3Q15836 100 aa6.92□□□□□ -1.3
HDLBP-242ENST00000488013 BATFQ16520 125 aa6.92□□□□□ -1.3
HDLBP-242ENST00000488013 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
HDLBP-242ENST00000488013 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
HDLBP-242ENST00000488013 TRBV7-6A0A0J9YX20 115 aa6.91□□□□□ -1.3
HDLBP-242ENST00000488013 Q1RN00 199 aa6.91□□□□□ -1.3
HDLBP-242ENST00000488013 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
HDLBP-242ENST00000488013 RPL37AP8A6NKH3 93 aa6.9□□□□□ -1.3
HDLBP-242ENST00000488013 ZNF73O43830 326 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-242ENST00000488013 COX6CP09669 75 aa6.9□□□□□ -1.3
HDLBP-242ENST00000488013 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.3
HDLBP-242ENST00000488013 XGP55808 180 aa6.9□□□□□ -1.3
HDLBP-242ENST00000488013 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
HDLBP-242ENST00000488013 DIRC1Q969H9 104 aa6.9□□□□□ -1.3
HDLBP-242ENST00000488013 HERC2O95714 4834 aa6.89□□□□□ -1.31
HDLBP-242ENST00000488013 SNCGO76070 127 aa6.89□□□□□ -1.31
HDLBP-242ENST00000488013 SNHG12Q9BXW3 62 aa6.89□□□□□ -1.31
HDLBP-242ENST00000488013 H0YGX0 51 aa6.88□□□□□ -1.31
HDLBP-242ENST00000488013 H7C2G1 150 aa6.88□□□□□ -1.31
HDLBP-242ENST00000488013 K7ERJ3 54 aa6.88□□□□□ -1.31
HDLBP-242ENST00000488013 SPRR1AP35321 89 aa6.88□□□□□ -1.31
HDLBP-242ENST00000488013 LYRM7Q5U5X0 104 aa6.88□□□□□ -1.31
HDLBP-242ENST00000488013 SMIM11BQ8TCY0 68 aa6.88□□□□□ -1.31
HDLBP-242ENST00000488013 ETDCA0A1B0GVM5 59 aa6.87□□□□□ -1.31
HDLBP-242ENST00000488013 H0Y9J4 135 aa6.87□□□□□ -1.31
HDLBP-242ENST00000488013 BCE1O60756 84 aa6.87□□□□□ -1.31
HDLBP-242ENST00000488013 PSMB2P49721 201 aa6.87□□□□□ -1.31
HDLBP-242ENST00000488013 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
HDLBP-242ENST00000488013 SLC25A20O43772 301 aa6.85□□□□□ -1.31
HDLBP-242ENST00000488013 TSPAN13O95857 204 aa6.85□□□□□ -1.31
HDLBP-242ENST00000488013 INAFM2P0DMQ5 153 aa6.85□□□□□ -1.31
HDLBP-242ENST00000488013 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
HDLBP-242ENST00000488013 SCGB1C2P0DMR2 95 aa6.84□□□□□ -1.31
HDLBP-242ENST00000488013 COX7BP24311 80 aa6.84□□□□□ -1.31
HDLBP-242ENST00000488013 UBE2AP49459 152 aa6.84□□□□□ -1.31
HDLBP-242ENST00000488013 C1orf137Q5JT78 98 aa6.84□□□□□ -1.31
HDLBP-242ENST00000488013 DHRS4-AS1Q9P1J3 65 aa6.84□□□□□ -1.31
HDLBP-242ENST00000488013 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.32
HDLBP-242ENST00000488013 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
HDLBP-242ENST00000488013 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
HDLBP-242ENST00000488013 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
HDLBP-242ENST00000488013 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
HDLBP-242ENST00000488013 RPL37AP61513 92 aaKnown RBP6.83□□□□□ -1.32
HDLBP-242ENST00000488013 Q6ZRX8 168 aa6.83□□□□□ -1.32
HDLBP-242ENST00000488013 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
HDLBP-242ENST00000488013 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
HDLBP-242ENST00000488013 A0A1B0GX51 115 aa6.82□□□□□ -1.32
HDLBP-242ENST00000488013 B5MCH6 92 aa6.82□□□□□ -1.32
HDLBP-242ENST00000488013 HAMPP81172 84 aa6.82□□□□□ -1.32
HDLBP-242ENST00000488013 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
HDLBP-242ENST00000488013 TAX1BP3O14907 124 aa6.81□□□□□ -1.32
HDLBP-242ENST00000488013 TRIAP1O43715 76 aa6.81□□□□□ -1.32
HDLBP-242ENST00000488013 ZNF861PO60384 105 aa6.81□□□□□ -1.32
HDLBP-242ENST00000488013 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
HDLBP-242ENST00000488013 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
HDLBP-242ENST00000488013 H3BUT2 72 aa6.8□□□□□ -1.32
HDLBP-242ENST00000488013 FABP2P12104 132 aa6.8□□□□□ -1.32
HDLBP-242ENST00000488013 H3BQ85 93 aa6.79□□□□□ -1.32
HDLBP-242ENST00000488013 LINC00575Q6W349 94 aa6.79□□□□□ -1.32
HDLBP-242ENST00000488013 A0A1W2PPM0 123 aa6.78□□□□□ -1.32
HDLBP-242ENST00000488013 hADV29S1A0JD25 119 aa6.78□□□□□ -1.32
HDLBP-242ENST00000488013 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
HDLBP-242ENST00000488013 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
HDLBP-242ENST00000488013 ZNF706Q9Y5V0 76 aaPredicted RBP6.78□□□□□ -1.32
HDLBP-242ENST00000488013 DNAL4O96015 105 aa6.77□□□□□ -1.33
HDLBP-242ENST00000488013 PRLHP81277 87 aa6.77□□□□□ -1.33
HDLBP-242ENST00000488013 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
HDLBP-242ENST00000488013 OCIAD2Q56VL3 154 aa6.77□□□□□ -1.33
HDLBP-242ENST00000488013 TRACP01848 142 aa6.76□□□□□ -1.33
HDLBP-242ENST00000488013 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
HDLBP-242ENST00000488013 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-242ENST00000488013 Q8N1X5 172 aa6.76□□□□□ -1.33
HDLBP-242ENST00000488013 HIGD2AQ9BW72 106 aa6.76□□□□□ -1.33
HDLBP-242ENST00000488013 FAT1Q14517 4588 aa6.74□□□□□ -1.33
HDLBP-242ENST00000488013 LST1O00453 97 aa6.74□□□□□ -1.33
HDLBP-242ENST00000488013 Q5VSD8 79 aa6.74□□□□□ -1.33
HDLBP-242ENST00000488013 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
HDLBP-242ENST00000488013 PPDPFLQ8WWR9 84 aa6.74□□□□□ -1.33
HDLBP-242ENST00000488013 Q9BRP9 147 aa6.74□□□□□ -1.33
HDLBP-242ENST00000488013 GTF2H5Q6ZYL4 71 aa6.73□□□□□ -1.33
HDLBP-242ENST00000488013 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
HDLBP-242ENST00000488013 SPCS1Q9Y6A9 102 aa6.73□□□□□ -1.33
HDLBP-242ENST00000488013 HSPG2P98160 4391 aa6.73□□□□□ -1.33
HDLBP-242ENST00000488013 KIAA1109Q2LD37 5005 aa6.72□□□□□ -1.33
HDLBP-242ENST00000488013 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
HDLBP-242ENST00000488013 TCL1BO95988 128 aa6.71□□□□□ -1.34
HDLBP-242ENST00000488013 FAM218AQ96MZ4 157 aa6.71□□□□□ -1.34
HDLBP-242ENST00000488013 ORMDL1Q9P0S3 153 aa6.71□□□□□ -1.34
HDLBP-242ENST00000488013 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
HDLBP-242ENST00000488013 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
HDLBP-242ENST00000488013 Q6ZQY7 126 aa6.7□□□□□ -1.34
HDLBP-242ENST00000488013 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
HDLBP-242ENST00000488013 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
HDLBP-242ENST00000488013 K7EP34 96 aa6.69□□□□□ -1.34
HDLBP-242ENST00000488013 TMEM256-PLSCR3K7ERE1 68 aa6.69□□□□□ -1.34
HDLBP-242ENST00000488013 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms