RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 Q6ZRX8 168 aa7.84□□□□□ -1.15
TRA2B-214ENST00000487615 WFDC13Q8IUB5 93 aa7.84□□□□□ -1.15
TRA2B-214ENST00000487615 NOTCH1P46531 2555 aa7.83□□□□□ -1.16
TRA2B-214ENST00000487615 COL6A5A8TX70 2615 aa7.83□□□□□ -1.16
TRA2B-214ENST00000487615 Q9BRP9 147 aa7.83□□□□□ -1.16
TRA2B-214ENST00000487615 RELNP78509 3460 aa7.83□□□□□ -1.16
TRA2B-214ENST00000487615 MDFIQ99750 246 aa7.82□□□□□ -1.16
TRA2B-214ENST00000487615 IGLV9-49A0A0B4J1Y8 123 aa7.82□□□□□ -1.16
TRA2B-214ENST00000487615 DCHS2Q6V1P9 2916 aa7.81□□□□□ -1.16
TRA2B-214ENST00000487615 CRYBG3Q68DQ2 2970 aa7.81□□□□□ -1.16
TRA2B-214ENST00000487615 A0A087WSZ3 146 aa7.81□□□□□ -1.16
TRA2B-214ENST00000487615 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
TRA2B-214ENST00000487615 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
TRA2B-214ENST00000487615 TM2D3Q9BRN9 247 aa7.8□□□□□ -1.16
TRA2B-214ENST00000487615 KCNQ1DNQ9H478 68 aa7.8□□□□□ -1.16
TRA2B-214ENST00000487615 FAM30AQ9NZY2 134 aa7.8□□□□□ -1.16
TRA2B-214ENST00000487615 ATP5EP56381 51 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-214ENST00000487615 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
TRA2B-214ENST00000487615 Q8N9L7 120 aa7.79□□□□□ -1.16
TRA2B-214ENST00000487615 DCHS1Q96JQ0 3298 aa7.79□□□□□ -1.16
TRA2B-214ENST00000487615 C16orf90A8MZG2 172 aa7.79□□□□□ -1.16
TRA2B-214ENST00000487615 C4orf48Q5BLP8 95 aa7.79□□□□□ -1.16
TRA2B-214ENST00000487615 STAB1Q9NY15 2570 aa7.79□□□□□ -1.16
TRA2B-214ENST00000487615 FAM168BA1KXE4 195 aa7.78□□□□□ -1.16
TRA2B-214ENST00000487615 A0A1B0GW54 56 aa7.78□□□□□ -1.16
TRA2B-214ENST00000487615 CRYGAP11844 174 aa7.78□□□□□ -1.16
TRA2B-214ENST00000487615 HRCT1Q6UXD1 115 aa7.78□□□□□ -1.16
TRA2B-214ENST00000487615 ZFHX4Q86UP3 3567 aa7.77□□□□□ -1.17
TRA2B-214ENST00000487615 IGLV5-52A0A0A0MRZ9 124 aa7.77□□□□□ -1.17
TRA2B-214ENST00000487615 LRCOL1A6NCL2 159 aa7.77□□□□□ -1.17
TRA2B-214ENST00000487615 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
TRA2B-214ENST00000487615 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
TRA2B-214ENST00000487615 ASH1LQ9NR48 2969 aaKnown RBP7.76□□□□□ -1.17
TRA2B-214ENST00000487615 Q8NBF4 154 aa7.76□□□□□ -1.17
TRA2B-214ENST00000487615 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
TRA2B-214ENST00000487615 BCE1O60756 84 aa7.76□□□□□ -1.17
TRA2B-214ENST00000487615 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
TRA2B-214ENST00000487615 TLX1NBP0CAT3 122 aa7.75□□□□□ -1.17
TRA2B-214ENST00000487615 CELSR2Q9HCU4 2923 aa7.74□□□□□ -1.17
TRA2B-214ENST00000487615 IGKV4-1P06312 121 aa7.74□□□□□ -1.17
TRA2B-214ENST00000487615 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
TRA2B-214ENST00000487615 TMEM254Q8TBM7 123 aa7.74□□□□□ -1.17
TRA2B-214ENST00000487615 DEFB116Q30KQ4 102 aa7.74□□□□□ -1.17
TRA2B-214ENST00000487615 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
TRA2B-214ENST00000487615 NF1P21359 2839 aa7.73□□□□□ -1.17
TRA2B-214ENST00000487615 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
TRA2B-214ENST00000487615 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
TRA2B-214ENST00000487615 LINC00476Q8WZB0 136 aa7.72□□□□□ -1.17
TRA2B-214ENST00000487615 PLA2G2DQ9UNK4 145 aa7.72□□□□□ -1.17
TRA2B-214ENST00000487615 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
TRA2B-214ENST00000487615 NSD1Q96L73 2696 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-214ENST00000487615 CASC10Q5T4H9 136 aa7.71□□□□□ -1.18
TRA2B-214ENST00000487615 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
TRA2B-214ENST00000487615 EPM2AB3EWF7 344 aa7.7□□□□□ -1.18
TRA2B-214ENST00000487615 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
TRA2B-214ENST00000487615 FBN2P35556 2912 aa7.69□□□□□ -1.18
TRA2B-214ENST00000487615 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
TRA2B-214ENST00000487615 Q8N377 158 aa7.69□□□□□ -1.18
TRA2B-214ENST00000487615 HIVEP1P15822 2718 aa7.69□□□□□ -1.18
TRA2B-214ENST00000487615 MXRA5Q9NR99 2828 aa7.68□□□□□ -1.18
TRA2B-214ENST00000487615 PRR4Q16378 134 aa7.68□□□□□ -1.18
TRA2B-214ENST00000487615 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
TRA2B-214ENST00000487615 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
TRA2B-214ENST00000487615 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
TRA2B-214ENST00000487615 Q8NDZ9 215 aa7.67□□□□□ -1.18
TRA2B-214ENST00000487615 SMIM26A0A096LP01 95 aa7.66□□□□□ -1.18
TRA2B-214ENST00000487615 C5orf47Q569G3 176 aa7.65□□□□□ -1.18
TRA2B-214ENST00000487615 CIRBP-AS1Q8TBR5 109 aa7.65□□□□□ -1.18
TRA2B-214ENST00000487615 RTL8CO15255 209 aa7.64□□□□□ -1.19
TRA2B-214ENST00000487615 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
TRA2B-214ENST00000487615 APLNQ9ULZ1 77 aa7.63□□□□□ -1.19
TRA2B-214ENST00000487615 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
TRA2B-214ENST00000487615 C9orf163Q8N9P6 203 aa7.63□□□□□ -1.19
TRA2B-214ENST00000487615 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
TRA2B-214ENST00000487615 CNBPP62633 177 aaKnown RBP7.62□□□□□ -1.19
TRA2B-214ENST00000487615 NIPBLQ6KC79 2804 aaeCLIP7.62□□□□□ -1.195e-6■□□□□ 10.2
TRA2B-214ENST00000487615 BAHCC1Q9P281 2608 aa7.61□□□□□ -1.19
TRA2B-214ENST00000487615 BRK1Q8WUW1 75 aa7.6□□□□□ -1.19
TRA2B-214ENST00000487615 H0Y9P7 68 aa7.6□□□□□ -1.19
TRA2B-214ENST00000487615 MOBPQ13875 183 aa7.6□□□□□ -1.19
TRA2B-214ENST00000487615 SMG1Q96Q15 3661 aaKnown RBP7.6□□□□□ -1.19
TRA2B-214ENST00000487615 A0A1W2PNN7 141 aa7.6□□□□□ -1.19
TRA2B-214ENST00000487615 ERC2-IT1O76042 136 aa7.6□□□□□ -1.19
TRA2B-214ENST00000487615 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
TRA2B-214ENST00000487615 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
TRA2B-214ENST00000487615 NBEAL1Q6ZS30 2694 aa7.58□□□□□ -1.2
TRA2B-214ENST00000487615 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
TRA2B-214ENST00000487615 IGLV5-48A0A075B6I7 105 aa7.58□□□□□ -1.2
TRA2B-214ENST00000487615 K7EQZ3 153 aa7.57□□□□□ -1.2
TRA2B-214ENST00000487615 KMT2BQ9UMN6 2715 aaPredicted RBP7.57□□□□□ -1.2
TRA2B-214ENST00000487615 A0A1W2PNM2 257 aa7.56□□□□□ -1.2
TRA2B-214ENST00000487615 V9GYY9 64 aa7.56□□□□□ -1.2
TRA2B-214ENST00000487615 A0A087WTM6 91 aa7.54□□□□□ -1.2
TRA2B-214ENST00000487615 RPL37AP61513 92 aaKnown RBP7.54□□□□□ -1.2
TRA2B-214ENST00000487615 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
TRA2B-214ENST00000487615 A0A0G2JQZ4 141 aa7.53□□□□□ -1.2
TRA2B-214ENST00000487615 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
TRA2B-214ENST00000487615 C1orf64Q8NEQ6 169 aa7.52□□□□□ -1.2
TRA2B-214ENST00000487615 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
TRA2B-214ENST00000487615 A8MWP4 228 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms