RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MP68P56378 58 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 SPINT4Q6UDR6 99 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 Q6ZUT4 128 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 TMEM126AQ9H061 195 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 APLNQ9ULZ1 77 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 KLK5Q9Y337 293 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-216ENST00000487043 FBN3Q75N90 2809 aa2.27□□□□□ -2.05
PTCD3-216ENST00000487043 TINCRA0A1B0GVN0 87 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 C11orf86A6NJI1 115 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 WFDC2Q14508 124 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 ETDBQ3ZM63 59 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 Q6Q795 121 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 WFDC10BQ8IUB3 73 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 LINC00269Q8N2A0 174 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 UPK3BQ9BT76 320 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 NHP2Q9NX24 153 aaKnown RBP2.26□□□□□ -2.05
PTCD3-216ENST00000487043 LINC00588Q9Y4M8 146 aa2.26□□□□□ -2.05
PTCD3-216ENST00000487043 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 LINC00959A0A1B0GUT2 108 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 SNCGO76070 127 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 IGHV3-30P01768 117 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 IGHV3-33P01772 117 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 ANGP03950 147 aaKnown RBP2.25□□□□□ -2.05
PTCD3-216ENST00000487043 IGHV3-30-3P0DP02 117 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 IGHV3-30-5P0DP03 117 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 ZNF22P17026 224 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-216ENST00000487043 HERVK_113P63121 156 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 COX6A2Q02221 97 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 SS18Q15532 418 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 C4orf26Q17RF5 130 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 LINC01556Q5JQF7 62 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 ENHOQ6UWT2 76 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-216ENST00000487043 TEN1Q86WV5 123 aa2.25□□□□□ -2.05
PTCD3-216ENST00000487043 TGP01266 2768 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IGKV2D-26A0A0A0MRZ7 120 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IGHV1-58A0A0C4DH39 117 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IGKV3OR2-268A0A0C4DH90 116 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 MYMXA0A1B0GTQ4 84 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IBA57-AS1B1ANH7 110 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 LEPROTO15243 131 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IFITM1P13164 125 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 FXYD2P54710 66 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 MIAQ16674 131 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 TMEM170BQ5T4T1 132 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IGFL1Q6UW32 110 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 MUC7Q8TAX7 377 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 UBE2WQ96B02 151 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 NAA38Q9BRA0 125 aaKnown RBP2.24□□□□□ -2.05
PTCD3-216ENST00000487043 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 TENM2Q9NT68 2774 aa2.24□□□□□ -2.05
PTCD3-216ENST00000487043 IGLV10-54A0A075B6I4 117 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 LOC107984156A0A0G2JMH3 177 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 A8MWP4 228 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 C3orf84H3BNL1 204 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 J3QQQ9 107 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 RTL8CO15255 209 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 CRPP02741 224 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 XCL1P47992 114 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 KRTAP26-1Q6PEX3 210 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 CLPSL2Q6UWE3 100 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 ADM2Q7Z4H4 148 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 C5orf38Q86SI9 138 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 ARL17AQ8IVW1 177 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 UBE2DNLQ8IWF7 75 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 C10orf126Q8N4M7 172 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 LINC01600Q96MT4 127 aa2.23□□□□□ -2.05
PTCD3-216ENST00000487043 PRKDCP78527 4128 aaKnown RBP2.23□□□□□ -2.05
PTCD3-216ENST00000487043 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
PTCD3-216ENST00000487043 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 A6NED7 52 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 COX7A2LO14548 114 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 MT-ATP8P03928 68 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 ACYP1P07311 99 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 LGALS3P17931 250 aaKnown RBP2.22□□□□□ -2.05
PTCD3-216ENST00000487043 KRTAP13-2Q52LG2 175 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 IMUPQ9GZP8 106 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 TP73-AS1Q9UF72 201 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 SS18L2Q9UHA2 77 aa2.22□□□□□ -2.05
PTCD3-216ENST00000487043 DYNC2H1Q8NCM8 4307 aaKnown RBP2.22□□□□□ -2.05
PTCD3-216ENST00000487043 IGHV3-64A0A075B6Q5 118 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-216ENST00000487043 NBDYA0A0U1RRE5 68 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 ZNF815PA8K554 130 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 H3BQ85 93 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 NDUFA1O15239 70 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 COX6CP09669 75 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 TSPEAR-AS2P59090 65 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 RPS28P62857 69 aaKnown RBP2.21□□□□□ -2.06
PTCD3-216ENST00000487043 ATXN8Q156A1 80 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 MEIG1Q5JSS6 88 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 SCGB1D4Q6XE38 83 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 Q8IZM0 81 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 COX7B2Q8TF08 81 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 TTTY13Q9BZ97 58 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 PRO1854Q9UHT4 67 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 NDUFA12Q9UI09 145 aa2.21□□□□□ -2.06
PTCD3-216ENST00000487043 CSMD3Q7Z407 3707 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms