RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 A0A087WTM6 91 aa9.36□□□□□ -0.91
POLR2J3-204ENST00000486319 J3QR89 54 aa9.36□□□□□ -0.91
POLR2J3-204ENST00000486319 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-204ENST00000486319 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-204ENST00000486319 Q8N814 137 aa9.35□□□□□ -0.91
POLR2J3-204ENST00000486319 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
POLR2J3-204ENST00000486319 PPDPFLQ8WWR9 84 aa9.35□□□□□ -0.91
POLR2J3-204ENST00000486319 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
POLR2J3-204ENST00000486319 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
POLR2J3-204ENST00000486319 BAALC-AS2P0C853 105 aa9.33□□□□□ -0.92
POLR2J3-204ENST00000486319 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
POLR2J3-204ENST00000486319 A0A096LNI7 61 aa9.32□□□□□ -0.92
POLR2J3-204ENST00000486319 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
POLR2J3-204ENST00000486319 LINC00575Q6W349 94 aa9.32□□□□□ -0.92
POLR2J3-204ENST00000486319 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 COX7BP24311 80 aa9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
POLR2J3-204ENST00000486319 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
POLR2J3-204ENST00000486319 ELOF1P60002 83 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-204ENST00000486319 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-204ENST00000486319 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
POLR2J3-204ENST00000486319 HERC2O95714 4834 aa9.29□□□□□ -0.92
POLR2J3-204ENST00000486319 IGKV2-24A0A0C4DH68 120 aa9.29□□□□□ -0.92
POLR2J3-204ENST00000486319 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
POLR2J3-204ENST00000486319 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
POLR2J3-204ENST00000486319 PRYO14603 147 aa9.28□□□□□ -0.92
POLR2J3-204ENST00000486319 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
POLR2J3-204ENST00000486319 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
POLR2J3-204ENST00000486319 TEX49A0A1B0GTD5 131 aa9.26□□□□□ -0.93
POLR2J3-204ENST00000486319 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
POLR2J3-204ENST00000486319 DNAH5Q8TE73 4624 aa9.25□□□□□ -0.93
POLR2J3-204ENST00000486319 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
POLR2J3-204ENST00000486319 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
POLR2J3-204ENST00000486319 H3BQ85 93 aa9.25□□□□□ -0.93
POLR2J3-204ENST00000486319 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
POLR2J3-204ENST00000486319 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
POLR2J3-204ENST00000486319 GHRHP01286 108 aa9.24□□□□□ -0.93
POLR2J3-204ENST00000486319 SPRR1AP35321 89 aa9.24□□□□□ -0.93
POLR2J3-204ENST00000486319 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
POLR2J3-204ENST00000486319 RYR1P21817 5038 aa9.22□□□□□ -0.93
POLR2J3-204ENST00000486319 CHTF8P0CG12 524 aa9.22□□□□□ -0.93
POLR2J3-204ENST00000486319 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
POLR2J3-204ENST00000486319 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
POLR2J3-204ENST00000486319 KRTAP10-1P60331 282 aa9.21□□□□□ -0.93
POLR2J3-204ENST00000486319 VPS25Q9BRG1 176 aa9.21□□□□□ -0.93
POLR2J3-204ENST00000486319 ETDCA0A1B0GVM5 59 aa9.21□□□□□ -0.94
POLR2J3-204ENST00000486319 Q6ZQY7 126 aa9.21□□□□□ -0.94
POLR2J3-204ENST00000486319 KRTAP4-16G5E9R7 235 aaPredicted RBP9.2□□□□□ -0.94
POLR2J3-204ENST00000486319 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
POLR2J3-204ENST00000486319 HSPG2P98160 4391 aa9.19□□□□□ -0.94
POLR2J3-204ENST00000486319 B5MCH6 92 aa9.19□□□□□ -0.94
POLR2J3-204ENST00000486319 Q6ZRX8 168 aa9.19□□□□□ -0.94
POLR2J3-204ENST00000486319 DHRS4-AS1Q9P1J3 65 aa9.19□□□□□ -0.94
POLR2J3-204ENST00000486319 JMJD7-PLA2G4BH0Y9G9 81 aa9.18□□□□□ -0.94
POLR2J3-204ENST00000486319 OBSCN-AS1Q96MR7 158 aa9.18□□□□□ -0.94
POLR2J3-204ENST00000486319 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
POLR2J3-204ENST00000486319 SPACA4Q8TDM5 124 aa9.17□□□□□ -0.94
POLR2J3-204ENST00000486319 DPH3Q96FX2 82 aa9.17□□□□□ -0.94
POLR2J3-204ENST00000486319 XGP55808 180 aa9.15□□□□□ -0.94
POLR2J3-204ENST00000486319 UBE2BP63146 152 aa9.15□□□□□ -0.94
POLR2J3-204ENST00000486319 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
POLR2J3-204ENST00000486319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.15□□□□□ -0.95
POLR2J3-204ENST00000486319 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
POLR2J3-204ENST00000486319 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
POLR2J3-204ENST00000486319 PANO1I0J062 215 aa9.14□□□□□ -0.95
POLR2J3-204ENST00000486319 Q8N1X5 172 aa9.13□□□□□ -0.95
POLR2J3-204ENST00000486319 KRTAP17-1Q9BYP8 105 aa9.13□□□□□ -0.95
POLR2J3-204ENST00000486319 LAMTOR3Q9UHA4 124 aa9.13□□□□□ -0.95
POLR2J3-204ENST00000486319 ACYP1P07311 99 aa9.12□□□□□ -0.95
POLR2J3-204ENST00000486319 Q9BRP9 147 aa9.12□□□□□ -0.95
POLR2J3-204ENST00000486319 FAM19A1Q7Z5A9 133 aa9.11□□□□□ -0.95
POLR2J3-204ENST00000486319 KRTAP4-5Q9BYR2 181 aa9.11□□□□□ -0.95
POLR2J3-204ENST00000486319 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
POLR2J3-204ENST00000486319 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
POLR2J3-204ENST00000486319 HAMPP81172 84 aa9.1□□□□□ -0.95
POLR2J3-204ENST00000486319 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-204ENST00000486319 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
POLR2J3-204ENST00000486319 PCLOQ9Y6V0 5065 aa9.09□□□□□ -0.95
POLR2J3-204ENST00000486319 H0Y9J4 135 aa9.08□□□□□ -0.96
POLR2J3-204ENST00000486319 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
POLR2J3-204ENST00000486319 A0A1B0GV72 72 aa9.07□□□□□ -0.96
POLR2J3-204ENST00000486319 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-204ENST00000486319 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
POLR2J3-204ENST00000486319 Q6ZSA8 131 aa9.07□□□□□ -0.96
POLR2J3-204ENST00000486319 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
POLR2J3-204ENST00000486319 SMCR5Q8TEV8 140 aa9.07□□□□□ -0.96
POLR2J3-204ENST00000486319 SMR3BP02814 79 aaPredicted RBP9.06□□□□□ -0.96
POLR2J3-204ENST00000486319 IGLV5-48A0A075B6I7 105 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 CCKP06307 115 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 PDE6GP18545 87 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 PRLHP81277 87 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 DSCR8Q96T75 97 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 LOC110117498A0A087WWA1 95 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 BCE1O60756 84 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms