RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ADAMTSL4-AS1Q5T5F5 129 aa10.63□□□□□ -0.71
PRPF40A-209ENST00000486100 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
PRPF40A-209ENST00000486100 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
PRPF40A-209ENST00000486100 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
PRPF40A-209ENST00000486100 IGLV6-57P01721 117 aa10.61□□□□□ -0.71
PRPF40A-209ENST00000486100 S100A7L2Q5SY68 101 aa10.61□□□□□ -0.71
PRPF40A-209ENST00000486100 SOSTDC1Q6X4U4 206 aa10.61□□□□□ -0.71
PRPF40A-209ENST00000486100 LOC105371267A0A1B0GV96 52 aa10.6□□□□□ -0.71
PRPF40A-209ENST00000486100 PPDPFQ9H3Y8 114 aa10.6□□□□□ -0.71
PRPF40A-209ENST00000486100 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-209ENST00000486100 NPC2P61916 151 aa10.59□□□□□ -0.71
PRPF40A-209ENST00000486100 LINC00483Q53H64 154 aa10.59□□□□□ -0.71
PRPF40A-209ENST00000486100 PYY3Q5JQD4 70 aa10.59□□□□□ -0.71
PRPF40A-209ENST00000486100 ERC2-IT1O76042 136 aa10.58□□□□□ -0.72
PRPF40A-209ENST00000486100 SMIM6P0DI80 62 aa10.58□□□□□ -0.72
PRPF40A-209ENST00000486100 C4orf48Q5BLP8 95 aa10.57□□□□□ -0.72
PRPF40A-209ENST00000486100 GAGE2AQ6NT46 116 aa10.57□□□□□ -0.72
PRPF40A-209ENST00000486100 Q6ZRX8 168 aa10.57□□□□□ -0.72
PRPF40A-209ENST00000486100 Q9BRP9 147 aa10.57□□□□□ -0.72
PRPF40A-209ENST00000486100 TRAV23DV6A0A075B6W5 121 aa10.56□□□□□ -0.72
PRPF40A-209ENST00000486100 LITAFQ99732 161 aa10.56□□□□□ -0.72
PRPF40A-209ENST00000486100 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
PRPF40A-209ENST00000486100 TIMM17BO60830 172 aa10.55□□□□□ -0.72
PRPF40A-209ENST00000486100 ATOH7Q8N100 152 aa10.55□□□□□ -0.72
PRPF40A-209ENST00000486100 Q8NBF4 154 aa10.55□□□□□ -0.72
PRPF40A-209ENST00000486100 MUC2Q02817 5179 aa10.54□□□□□ -0.72
PRPF40A-209ENST00000486100 LINC00308Q8TCZ7 52 aa10.54□□□□□ -0.72
PRPF40A-209ENST00000486100 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
PRPF40A-209ENST00000486100 ZNF815PA8K554 130 aa10.53□□□□□ -0.72
PRPF40A-209ENST00000486100 ZNF73O43830 326 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-209ENST00000486100 CBY1Q9Y3M2 126 aa10.53□□□□□ -0.72
PRPF40A-209ENST00000486100 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
PRPF40A-209ENST00000486100 SPANXCQ9NY87 97 aa10.52□□□□□ -0.73
PRPF40A-209ENST00000486100 SPINK1P00995 79 aa10.5□□□□□ -0.73
PRPF40A-209ENST00000486100 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-209ENST00000486100 SSBP3-AS1Q7Z2R9 100 aa10.5□□□□□ -0.73
PRPF40A-209ENST00000486100 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
PRPF40A-209ENST00000486100 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
PRPF40A-209ENST00000486100 CDIP1Q9H305 208 aa10.49□□□□□ -0.73
PRPF40A-209ENST00000486100 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
PRPF40A-209ENST00000486100 MOBPQ13875 183 aa10.48□□□□□ -0.73
PRPF40A-209ENST00000486100 OR13C6PQ8NH95 151 aa10.48□□□□□ -0.73
PRPF40A-209ENST00000486100 SPATA45Q537H7 98 aa10.47□□□□□ -0.73
PRPF40A-209ENST00000486100 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
PRPF40A-209ENST00000486100 LINC00518Q8N0U6 118 aa10.46□□□□□ -0.73
PRPF40A-209ENST00000486100 PAM16Q9Y3D7 125 aa10.46□□□□□ -0.73
PRPF40A-209ENST00000486100 DLEU1O43261 78 aa10.45□□□□□ -0.74
PRPF40A-209ENST00000486100 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
PRPF40A-209ENST00000486100 COX8AP10176 69 aa10.44□□□□□ -0.74
PRPF40A-209ENST00000486100 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
PRPF40A-209ENST00000486100 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
PRPF40A-209ENST00000486100 RPS29P62273 56 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-209ENST00000486100 C12orf57Q99622 126 aa10.41□□□□□ -0.74
PRPF40A-209ENST00000486100 DHRS4-AS1Q9P1J3 65 aa10.41□□□□□ -0.74
PRPF40A-209ENST00000486100 MUC17Q685J3 4493 aa10.4□□□□□ -0.74
PRPF40A-209ENST00000486100 A0A0U1RQV1 116 aa10.4□□□□□ -0.74
PRPF40A-209ENST00000486100 SLC25A34Q6PIV7 304 aa10.4□□□□□ -0.74
PRPF40A-209ENST00000486100 PCP2Q8IVA1 136 aa10.4□□□□□ -0.74
PRPF40A-209ENST00000486100 IFITM1P13164 125 aa10.39□□□□□ -0.75
PRPF40A-209ENST00000486100 C9orf153Q5TBE3 101 aa10.39□□□□□ -0.75
PRPF40A-209ENST00000486100 COPS9Q8WXC6 57 aa10.39□□□□□ -0.75
PRPF40A-209ENST00000486100 SPRR1BP22528 89 aa10.38□□□□□ -0.75
PRPF40A-209ENST00000486100 Q6ZVH6 145 aa10.38□□□□□ -0.75
PRPF40A-209ENST00000486100 Q8N377 158 aa10.38□□□□□ -0.75
PRPF40A-209ENST00000486100 COX7BP24311 80 aa10.37□□□□□ -0.75
PRPF40A-209ENST00000486100 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
PRPF40A-209ENST00000486100 C6orf99Q4VX62 202 aa10.37□□□□□ -0.75
PRPF40A-209ENST00000486100 KRTAP13-3Q3SY46 172 aa10.36□□□□□ -0.75
PRPF40A-209ENST00000486100 C14orf144Q96I85 54 aa10.36□□□□□ -0.75
PRPF40A-209ENST00000486100 UQCR10Q9UDW1 63 aa10.36□□□□□ -0.75
PRPF40A-209ENST00000486100 SLC25A20O43772 301 aa10.35□□□□□ -0.75
PRPF40A-209ENST00000486100 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
PRPF40A-209ENST00000486100 TSTD3H0UI37 97 aa10.34□□□□□ -0.75
PRPF40A-209ENST00000486100 MUSTN1Q8IVN3 82 aa10.34□□□□□ -0.75
PRPF40A-209ENST00000486100 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
PRPF40A-209ENST00000486100 LAMTOR3Q9UHA4 124 aa10.32□□□□□ -0.76
PRPF40A-209ENST00000486100 A6NDN8 102 aa10.31□□□□□ -0.76
PRPF40A-209ENST00000486100 TAL2Q16559 108 aa10.3□□□□□ -0.76
PRPF40A-209ENST00000486100 A0A1B0GWB2 263 aa10.29□□□□□ -0.76
PRPF40A-209ENST00000486100 FAT4Q6V0I7 4981 aa10.28□□□□□ -0.76
PRPF40A-209ENST00000486100 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
PRPF40A-209ENST00000486100 TEX49A0A1B0GTD5 131 aa10.27□□□□□ -0.77
PRPF40A-209ENST00000486100 C2orf91Q6ZV80 131 aa10.27□□□□□ -0.77
PRPF40A-209ENST00000486100 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.77
PRPF40A-209ENST00000486100 PRO1933Q9H354 126 aa10.25□□□□□ -0.77
PRPF40A-209ENST00000486100 A4D1N5 150 aa10.24□□□□□ -0.77
PRPF40A-209ENST00000486100 ASB16-AS1Q495Z4 193 aa10.24□□□□□ -0.77
PRPF40A-209ENST00000486100 HRCT1Q6UXD1 115 aa10.24□□□□□ -0.77
PRPF40A-209ENST00000486100 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
PRPF40A-209ENST00000486100 HSD52Q0P140 79 aa10.23□□□□□ -0.77
PRPF40A-209ENST00000486100 Q1RN00 199 aa10.23□□□□□ -0.77
PRPF40A-209ENST00000486100 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
PRPF40A-209ENST00000486100 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
PRPF40A-209ENST00000486100 IGLV5-48A0A075B6I7 105 aa10.21□□□□□ -0.77
PRPF40A-209ENST00000486100 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-209ENST00000486100 SMIM29Q86T20 159 aa10.21□□□□□ -0.77
PRPF40A-209ENST00000486100 SEC61BP60468 96 aaKnown RBP10.2□□□□□ -0.78
PRPF40A-209ENST00000486100 CD164Q04900 197 aa10.2□□□□□ -0.78
PRPF40A-209ENST00000486100 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
PRPF40A-209ENST00000486100 A6NJY4 79 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms