RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ADAMTSL4-AS1Q5T5F5 129 aa14.44□□□□□ -0.1
HLA-F-227ENST00000485513 COLCA2A8K830 154 aa14.43□□□□□ -0.1
HLA-F-227ENST00000485513 EIF4EBP3O60516 100 aaPredicted RBP14.43□□□□□ -0.1
HLA-F-227ENST00000485513 Q8N377 158 aa14.43□□□□□ -0.1
HLA-F-227ENST00000485513 E9PLD3 99 aa14.42□□□□□ -0.1
HLA-F-227ENST00000485513 ZNF73O43830 326 aaPredicted RBP14.42□□□□□ -0.1
HLA-F-227ENST00000485513 ASB16-AS1Q495Z4 193 aa14.4□□□□□ -0.1
HLA-F-227ENST00000485513 SLC25A20O43772 301 aa14.39□□□□□ -0.11
HLA-F-227ENST00000485513 C9orf153Q5TBE3 101 aa14.38□□□□□ -0.11
HLA-F-227ENST00000485513 SLC7A5P1Q8MH63 180 aa14.38□□□□□ -0.11
HLA-F-227ENST00000485513 CBY1Q9Y3M2 126 aa14.37□□□□□ -0.11
HLA-F-227ENST00000485513 ST20-AS1Q8NBB2 130 aa14.36□□□□□ -0.11
HLA-F-227ENST00000485513 HINT1P49773 126 aaPredicted RBP14.35□□□□□ -0.11
HLA-F-227ENST00000485513 SYS1-DBNDD2H3BUS1 97 aa14.34□□□□□ -0.11
HLA-F-227ENST00000485513 C5orf52A6NGY3 159 aa14.33□□□□□ -0.12
HLA-F-227ENST00000485513 SEC61BP60468 96 aaKnown RBP14.33□□□□□ -0.12
HLA-F-227ENST00000485513 LINC00308Q8TCZ7 52 aa14.32□□□□□ -0.12
HLA-F-227ENST00000485513 SPANXCQ9NY87 97 aa14.32□□□□□ -0.12
HLA-F-227ENST00000485513 OR13C6PQ8NH95 151 aa14.31□□□□□ -0.12
HLA-F-227ENST00000485513 LITAFQ99732 161 aa14.31□□□□□ -0.12
HLA-F-227ENST00000485513 TIMM17BO60830 172 aa14.29□□□□□ -0.12
HLA-F-227ENST00000485513 LINC01545Q5VT33 79 aa14.27□□□□□ -0.13
HLA-F-227ENST00000485513 KRTAP4-1Q9BYQ7 146 aa14.27□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BKO60814 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BJP06899 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BOP23527 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BBP33778 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BDP58876 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BCP62807 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST2H2BEQ16778 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BHQ93079 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BNQ99877 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 HIST1H2BMQ99879 126 aa14.26□□□□□ -0.13
HLA-F-227ENST00000485513 DHRS4-AS1Q9P1J3 65 aa14.25□□□□□ -0.13
HLA-F-227ENST00000485513 ZNF815PA8K554 130 aa14.24□□□□□ -0.13
HLA-F-227ENST00000485513 SPRR1BP22528 89 aa14.24□□□□□ -0.13
HLA-F-227ENST00000485513 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
HLA-F-227ENST00000485513 SPANXDQ9BXN6 97 aa14.24□□□□□ -0.13
HLA-F-227ENST00000485513 XP32Q5T750 250 aa14.23□□□□□ -0.13
HLA-F-227ENST00000485513 SLC25A34Q6PIV7 304 aa14.23□□□□□ -0.13
HLA-F-227ENST00000485513 TTTY13Q9BZ97 58 aa14.21□□□□□ -0.13
HLA-F-227ENST00000485513 LINC01547P58512 204 aaPredicted RBP14.2□□□□□ -0.14
HLA-F-227ENST00000485513 LINC00518Q8N0U6 118 aa14.19□□□□□ -0.14
HLA-F-227ENST00000485513 COX7BP24311 80 aa14.18□□□□□ -0.14
HLA-F-227ENST00000485513 LIMD2Q9BT23 127 aa14.18□□□□□ -0.14
HLA-F-227ENST00000485513 LAMTOR3Q9UHA4 124 aa14.18□□□□□ -0.14
HLA-F-227ENST00000485513 ELOF1P60002 83 aaKnown RBP14.17□□□□□ -0.14
HLA-F-227ENST00000485513 HRCT1Q6UXD1 115 aa14.17□□□□□ -0.14
HLA-F-227ENST00000485513 C3orf79P0CE67 100 aa14.16□□□□□ -0.14
HLA-F-227ENST00000485513 C6orf99Q4VX62 202 aa14.16□□□□□ -0.14
HLA-F-227ENST00000485513 TAL2Q16559 108 aa14.12□□□□□ -0.15
HLA-F-227ENST00000485513 KRTDAPP60985 99 aa14.1□□□□□ -0.15
HLA-F-227ENST00000485513 SCGB1D4Q6XE38 83 aa14.1□□□□□ -0.15
HLA-F-227ENST00000485513 DEFB105AQ8NG35 78 aa14.1□□□□□ -0.15
HLA-F-227ENST00000485513 Q1RN00 199 aa14.09□□□□□ -0.15
HLA-F-227ENST00000485513 TRBV7-6A0A0J9YX20 115 aa14.07□□□□□ -0.16
HLA-F-227ENST00000485513 TEX49A0A1B0GTD5 131 aa14.07□□□□□ -0.16
HLA-F-227ENST00000485513 COPS9Q8WXC6 57 aa14.06□□□□□ -0.16
HLA-F-227ENST00000485513 KRTAP9-6A0A140TA67 174 aa14.05□□□□□ -0.16
HLA-F-227ENST00000485513 CD164Q04900 197 aa14.05□□□□□ -0.16
HLA-F-227ENST00000485513 COA6Q5JTJ3 125 aaKnown RBP14.05□□□□□ -0.16
HLA-F-227ENST00000485513 PRO1933Q9H354 126 aa14.05□□□□□ -0.16
HLA-F-227ENST00000485513 C20orf202A1L168 122 aa14.03□□□□□ -0.16
HLA-F-227ENST00000485513 C9orf92A6NGG3 77 aa14.03□□□□□ -0.16
HLA-F-227ENST00000485513 IFITM1P13164 125 aa14.03□□□□□ -0.16
HLA-F-227ENST00000485513 ANKRD39Q53RE8 183 aa14.03□□□□□ -0.16
HLA-F-227ENST00000485513 A0A1B0GWB2 263 aa14.02□□□□□ -0.17
HLA-F-227ENST00000485513 A6NDN8 102 aa14.01□□□□□ -0.17
HLA-F-227ENST00000485513 H7C2G1 150 aa14□□□□□ -0.17
HLA-F-227ENST00000485513 Q6ZVH6 145 aa14□□□□□ -0.17
HLA-F-227ENST00000485513 SMIM29Q86T20 159 aa13.99□□□□□ -0.17
HLA-F-227ENST00000485513 AKR1D1P51857 326 aa13.98□□□□□ -0.17
HLA-F-227ENST00000485513 PCOTHQ58A44 107 aa13.98□□□□□ -0.17
HLA-F-227ENST00000485513 MUSTN1Q8IVN3 82 aa13.98□□□□□ -0.17
HLA-F-227ENST00000485513 ATOH7Q8N100 152 aa13.98□□□□□ -0.17
HLA-F-227ENST00000485513 IGLV5-48A0A075B6I7 105 aa13.97□□□□□ -0.17
HLA-F-227ENST00000485513 Q5XG85 94 aa13.95□□□□□ -0.18
HLA-F-227ENST00000485513 PCP2Q8IVA1 136 aa13.95□□□□□ -0.18
HLA-F-227ENST00000485513 IGLV8-61A0A075B6I0 122 aa13.94□□□□□ -0.18
HLA-F-227ENST00000485513 LCE2CQ5TA81 110 aa13.94□□□□□ -0.18
HLA-F-227ENST00000485513 A4D1N5 150 aa13.93□□□□□ -0.18
HLA-F-227ENST00000485513 TRAV13-2A0A0B4J235 113 aa13.91□□□□□ -0.18
HLA-F-227ENST00000485513 A0A0G2JQZ4 141 aa13.9□□□□□ -0.18
HLA-F-227ENST00000485513 C1orf195Q5TG92 126 aa13.9□□□□□ -0.18
HLA-F-227ENST00000485513 NHP2Q9NX24 153 aaKnown RBP13.9□□□□□ -0.18
HLA-F-227ENST00000485513 KRTAP19-2Q3LHN2 52 aa13.89□□□□□ -0.19
HLA-F-227ENST00000485513 SMIM11BQ8TCY0 68 aa13.89□□□□□ -0.19
HLA-F-227ENST00000485513 LCE2DQ5TA82 110 aaPredicted RBP13.88□□□□□ -0.19
HLA-F-227ENST00000485513 SNRPEP62304 92 aaKnown RBP13.84□□□□□ -0.19
HLA-F-227ENST00000485513 TCL1BO95988 128 aa13.79□□□□□ -0.2
HLA-F-227ENST00000485513 MT1HP80294 61 aa13.79□□□□□ -0.2
HLA-F-227ENST00000485513 VAMP3Q15836 100 aa13.79□□□□□ -0.2
HLA-F-227ENST00000485513 F8WEM9 126 aa13.78□□□□□ -0.2
HLA-F-227ENST00000485513 RPL37P61927 97 aaKnown RBP13.75□□□□□ -0.21
HLA-F-227ENST00000485513 LINC00575Q6W349 94 aa13.75□□□□□ -0.21
HLA-F-227ENST00000485513 hADV29S1A0JD25 119 aa13.71□□□□□ -0.21
HLA-F-227ENST00000485513 HSBP1L1C9JCN9 74 aa13.71□□□□□ -0.21
HLA-F-227ENST00000485513 CFC1BP0CG36 223 aa13.71□□□□□ -0.21
HLA-F-227ENST00000485513 Q6ZQY7 126 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms