RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
HDAC6-227ENST00000485102 M0R378 163 aa7.57□□□□□ -1.2
HDAC6-227ENST00000485102 PCP2Q8IVA1 136 aa7.57□□□□□ -1.2
HDAC6-227ENST00000485102 HIGD1BQ9P298 99 aa7.56□□□□□ -1.2
HDAC6-227ENST00000485102 VPREB1P12018 145 aa7.55□□□□□ -1.2
HDAC6-227ENST00000485102 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
HDAC6-227ENST00000485102 LINC00308Q8TCZ7 52 aa7.55□□□□□ -1.2
HDAC6-227ENST00000485102 RPL37AP8A6NKH3 93 aa7.54□□□□□ -1.2
HDAC6-227ENST00000485102 TAL2Q16559 108 aa7.54□□□□□ -1.2
HDAC6-227ENST00000485102 LITAFQ99732 161 aa7.54□□□□□ -1.2
HDAC6-227ENST00000485102 ANAPC11Q9NYG5 84 aa7.54□□□□□ -1.2
HDAC6-227ENST00000485102 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
HDAC6-227ENST00000485102 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
HDAC6-227ENST00000485102 HIST1H4GQ99525 98 aa7.53□□□□□ -1.2
HDAC6-227ENST00000485102 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
HDAC6-227ENST00000485102 CDIP1Q9H305 208 aa7.53□□□□□ -1.2
HDAC6-227ENST00000485102 UQCR10Q9UDW1 63 aa7.53□□□□□ -1.2
HDAC6-227ENST00000485102 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
HDAC6-227ENST00000485102 A6NJY4 79 aa7.52□□□□□ -1.21
HDAC6-227ENST00000485102 DAND5Q8N907 189 aa7.52□□□□□ -1.21
HDAC6-227ENST00000485102 C14orf144Q96I85 54 aa7.52□□□□□ -1.21
HDAC6-227ENST00000485102 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
HDAC6-227ENST00000485102 TMEM126AQ9H061 195 aa7.52□□□□□ -1.21
HDAC6-227ENST00000485102 IGLV7-46A0A075B6I9 117 aa7.51□□□□□ -1.21
HDAC6-227ENST00000485102 TRAV13-2A0A0B4J235 113 aa7.51□□□□□ -1.21
HDAC6-227ENST00000485102 UBE2AP49459 152 aa7.51□□□□□ -1.21
HDAC6-227ENST00000485102 HINT1P49773 126 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-227ENST00000485102 GAGE10A6NGK3 116 aa7.5□□□□□ -1.21
HDAC6-227ENST00000485102 PRYO14603 147 aa7.49□□□□□ -1.21
HDAC6-227ENST00000485102 DDTP30046 118 aa7.49□□□□□ -1.21
HDAC6-227ENST00000485102 MUSTN1Q8IVN3 82 aa7.49□□□□□ -1.21
HDAC6-227ENST00000485102 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
HDAC6-227ENST00000485102 TSTD3H0UI37 97 aa7.48□□□□□ -1.21
HDAC6-227ENST00000485102 KCNQ1DNQ9H478 68 aa7.48□□□□□ -1.21
HDAC6-227ENST00000485102 NCR3O14931 201 aa7.47□□□□□ -1.21
HDAC6-227ENST00000485102 NPC2P61916 151 aa7.47□□□□□ -1.21
HDAC6-227ENST00000485102 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
HDAC6-227ENST00000485102 HSD52Q0P140 79 aa7.46□□□□□ -1.22
HDAC6-227ENST00000485102 SPAG11AQ6PDA7 123 aa7.46□□□□□ -1.22
HDAC6-227ENST00000485102 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
HDAC6-227ENST00000485102 OR13C6PQ8NH95 151 aa7.46□□□□□ -1.22
HDAC6-227ENST00000485102 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
HDAC6-227ENST00000485102 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
HDAC6-227ENST00000485102 LINC00337Q8N6G1 96 aa7.45□□□□□ -1.22
HDAC6-227ENST00000485102 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
HDAC6-227ENST00000485102 PRLHP81277 87 aa7.44□□□□□ -1.22
HDAC6-227ENST00000485102 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-227ENST00000485102 C12orf57Q99622 126 aa7.44□□□□□ -1.22
HDAC6-227ENST00000485102 TRBV10-3A0A0K0K1G6 114 aa7.43□□□□□ -1.22
HDAC6-227ENST00000485102 ETDCA0A1B0GVM5 59 aa7.43□□□□□ -1.22
HDAC6-227ENST00000485102 A6NDN8 102 aa7.43□□□□□ -1.22
HDAC6-227ENST00000485102 FAM19A1Q7Z5A9 133 aa7.43□□□□□ -1.22
HDAC6-227ENST00000485102 CEND1Q8N111 149 aa7.43□□□□□ -1.22
HDAC6-227ENST00000485102 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
HDAC6-227ENST00000485102 A4D1N5 150 aa7.42□□□□□ -1.22
HDAC6-227ENST00000485102 VAMP3Q15836 100 aa7.42□□□□□ -1.22
HDAC6-227ENST00000485102 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
HDAC6-227ENST00000485102 RAB37Q96AX2 223 aa7.42□□□□□ -1.22
HDAC6-227ENST00000485102 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
HDAC6-227ENST00000485102 M0R143 59 aa7.41□□□□□ -1.22
HDAC6-227ENST00000485102 ZNF73O43830 326 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-227ENST00000485102 SNCGO76070 127 aa7.41□□□□□ -1.22
HDAC6-227ENST00000485102 SPRR1AP35321 89 aa7.41□□□□□ -1.22
HDAC6-227ENST00000485102 C3orf22Q8N5N4 141 aa7.41□□□□□ -1.22
HDAC6-227ENST00000485102 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.22
HDAC6-227ENST00000485102 Q8NDZ9 215 aa7.4□□□□□ -1.22
HDAC6-227ENST00000485102 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
HDAC6-227ENST00000485102 ZNF706Q9Y5V0 76 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-227ENST00000485102 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
HDAC6-227ENST00000485102 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-227ENST00000485102 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
HDAC6-227ENST00000485102 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
HDAC6-227ENST00000485102 BVES-AS1Q5T3Y7 98 aa7.38□□□□□ -1.23
HDAC6-227ENST00000485102 SPRR4Q96PI1 79 aa7.38□□□□□ -1.23
HDAC6-227ENST00000485102 DHRS4-AS1Q9P1J3 65 aa7.38□□□□□ -1.23
HDAC6-227ENST00000485102 SLC25A20O43772 301 aa7.36□□□□□ -1.23
HDAC6-227ENST00000485102 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
HDAC6-227ENST00000485102 Q6ZRX8 168 aa7.36□□□□□ -1.23
HDAC6-227ENST00000485102 HIGD2AQ9BW72 106 aa7.36□□□□□ -1.23
HDAC6-227ENST00000485102 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
HDAC6-227ENST00000485102 SPINK1P00995 79 aa7.35□□□□□ -1.23
HDAC6-227ENST00000485102 GHRHP01286 108 aa7.35□□□□□ -1.23
HDAC6-227ENST00000485102 COX7BP24311 80 aa7.35□□□□□ -1.23
HDAC6-227ENST00000485102 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-227ENST00000485102 PRO1933Q9H354 126 aa7.35□□□□□ -1.23
HDAC6-227ENST00000485102 B5MCH6 92 aa7.34□□□□□ -1.23
HDAC6-227ENST00000485102 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-227ENST00000485102 COX6CP09669 75 aa7.34□□□□□ -1.23
HDAC6-227ENST00000485102 CFC1BP0CG36 223 aa7.34□□□□□ -1.23
HDAC6-227ENST00000485102 CFC1P0CG37 223 aa7.34□□□□□ -1.23
HDAC6-227ENST00000485102 C6orf99Q4VX62 202 aa7.34□□□□□ -1.23
HDAC6-227ENST00000485102 H0YGX0 51 aa7.33□□□□□ -1.24
HDAC6-227ENST00000485102 ELOF1P60002 83 aaKnown RBP7.33□□□□□ -1.24
HDAC6-227ENST00000485102 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
HDAC6-227ENST00000485102 Q1RN00 199 aa7.33□□□□□ -1.24
HDAC6-227ENST00000485102 SMIM11BQ8TCY0 68 aa7.32□□□□□ -1.24
HDAC6-227ENST00000485102 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
HDAC6-227ENST00000485102 FXYD2P54710 66 aa7.31□□□□□ -1.24
HDAC6-227ENST00000485102 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
HDAC6-227ENST00000485102 Q8NBF4 154 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms