RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 K7EQZ3 153 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 TPRXLQ17RH7 258 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 PIGYQ3MUY2 71 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 UBE2DNLQ8IWF7 75 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 SPACA4Q8TDM5 124 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 KRTAP4-1Q9BYQ7 146 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 PRO3102Q9H379 93 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 FREM1Q5H8C1 2179 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 ESPL1Q14674 2120 aa0.91□□□□□ -2.26
ITGB1-213ENST00000484088 GOLGA4Q13439 2230 aaKnown RBP0.91□□□□□ -2.26
ITGB1-213ENST00000484088 RP1P56715 2156 aa0.9□□□□□ -2.26
ITGB1-213ENST00000484088 A0A096LNT2 108 aa0.9□□□□□ -2.27
ITGB1-213ENST00000484088 PRB1P04280 392 aa0.9□□□□□ -2.27
ITGB1-213ENST00000484088 RPS27P42677 84 aaKnown RBP0.9□□□□□ -2.27
ITGB1-213ENST00000484088 DEFB131AP59861 70 aa0.9□□□□□ -2.27
ITGB1-213ENST00000484088 RPL39P62891 51 aaKnown RBP0.9□□□□□ -2.27
ITGB1-213ENST00000484088 SPINK9Q5DT21 86 aa0.9□□□□□ -2.27
ITGB1-213ENST00000484088 RPL39LQ96EH5 51 aaKnown RBP0.9□□□□□ -2.27
ITGB1-213ENST00000484088 MRPL34Q9BQ48 92 aaKnown RBP0.9□□□□□ -2.27
ITGB1-213ENST00000484088 UNC13CQ8NB66 2214 aa0.9□□□□□ -2.27
ITGB1-213ENST00000484088 ALPK2Q86TB3 2170 aa0.9□□□□□ -2.27
ITGB1-213ENST00000484088 PLXNB2O15031 1838 aa0.89□□□□□ -2.27
ITGB1-213ENST00000484088 IGLV5-48A0A075B6I7 105 aa0.89□□□□□ -2.27
ITGB1-213ENST00000484088 G3V318 75 aa0.89□□□□□ -2.27
ITGB1-213ENST00000484088 PRB3Q04118 309 aaPredicted RBP0.89□□□□□ -2.27
ITGB1-213ENST00000484088 WFDC10BQ8IUB3 73 aa0.89□□□□□ -2.27
ITGB1-213ENST00000484088 TMEM167AQ8TBQ9 72 aa0.89□□□□□ -2.27
ITGB1-213ENST00000484088 ZFHX2Q9C0A1 2572 aaPredicted RBP0.89□□□□□ -2.27
ITGB1-213ENST00000484088 MED13LQ71F56 2210 aa0.88□□□□□ -2.27
ITGB1-213ENST00000484088 CEP192Q8TEP8 1941 aa0.88□□□□□ -2.27
ITGB1-213ENST00000484088 H3BUA1 57 aa0.88□□□□□ -2.27
ITGB1-213ENST00000484088 M0QY20 66 aa0.88□□□□□ -2.27
ITGB1-213ENST00000484088 PCOTHQ58A44 107 aa0.88□□□□□ -2.27
ITGB1-213ENST00000484088 COL4A5P29400 1685 aa0.88□□□□□ -2.27
ITGB1-213ENST00000484088 BRWD1Q9NSI6 2320 aa0.87□□□□□ -2.27
ITGB1-213ENST00000484088 K7EIM0 57 aa0.87□□□□□ -2.27
ITGB1-213ENST00000484088 KRTAP12-1P59990 96 aa0.87□□□□□ -2.27
ITGB1-213ENST00000484088 RPL37P61927 97 aaKnown RBP0.87□□□□□ -2.27
ITGB1-213ENST00000484088 DEFB109BQ30KR1 87 aa0.87□□□□□ -2.27
ITGB1-213ENST00000484088 Q6ZRN7 208 aaPredicted RBP0.87□□□□□ -2.27
ITGB1-213ENST00000484088 WFDC13Q8IUB5 93 aa0.87□□□□□ -2.27
ITGB1-213ENST00000484088 CRCT1Q9UGL9 99 aa0.87□□□□□ -2.27
ITGB1-213ENST00000484088 ANKRD17O75179 2603 aaKnown RBP0.87□□□□□ -2.27
ITGB1-213ENST00000484088 TNRC6CQ9HCJ0 1690 aaKnown RBP0.87□□□□□ -2.27
ITGB1-213ENST00000484088 PDE4DIPQ5VU43 2346 aa0.86□□□□□ -2.27
ITGB1-213ENST00000484088 I3L2K1 104 aa0.86□□□□□ -2.27
ITGB1-213ENST00000484088 UNQ6190/PRO20217Q6UXQ8 127 aa0.86□□□□□ -2.27
ITGB1-213ENST00000484088 LEAP2Q969E1 77 aa0.86□□□□□ -2.27
ITGB1-213ENST00000484088 TOMM7Q9P0U1 55 aa0.86□□□□□ -2.27
ITGB1-213ENST00000484088 COL4A2P08572 1712 aa0.86□□□□□ -2.27
ITGB1-213ENST00000484088 RTTNQ86VV8 2226 aa0.85□□□□□ -2.27
ITGB1-213ENST00000484088 WT1-ASQ06250 92 aa0.85□□□□□ -2.27
ITGB1-213ENST00000484088 DEFB123Q8N688 67 aa0.85□□□□□ -2.27
ITGB1-213ENST00000484088 KAAG1Q9UBP8 84 aa0.85□□□□□ -2.27
ITGB1-213ENST00000484088 KNTC1P50748 2209 aa0.85□□□□□ -2.27
ITGB1-213ENST00000484088 BAHCC1Q9P281 2608 aa0.85□□□□□ -2.27
ITGB1-213ENST00000484088 FBN3Q75N90 2809 aa0.84□□□□□ -2.27
ITGB1-213ENST00000484088 F5P12259 2224 aa0.84□□□□□ -2.27
ITGB1-213ENST00000484088 COX6A2Q02221 97 aa0.84□□□□□ -2.27
ITGB1-213ENST00000484088 H1FX-AS1Q4G0G2 97 aa0.84□□□□□ -2.27
ITGB1-213ENST00000484088 RPL39P5Q59GN2 51 aa0.84□□□□□ -2.27
ITGB1-213ENST00000484088 CACNA1EQ15878 2313 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB108AA8MXU0 73 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 H0YAA0 97 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 LYNX1P0DP58 116 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 KRTAP13-4Q3LI77 160 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 Q6ZSA8 131 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 OTOGLQ3ZCN5 2332 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 CADP27708 2225 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 CACNA1CQ13936 2221 aa0.83□□□□□ -2.28
ITGB1-213ENST00000484088 URB1O60287 2271 aaKnown RBP0.82□□□□□ -2.28
ITGB1-213ENST00000484088 CACNA1GO43497 2377 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 MMP24-AS1A0A0U1RRL7 71 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB103AP81534 67 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 NOP10Q9NPE3 64 aaKnown RBP0.82□□□□□ -2.28
ITGB1-213ENST00000484088 SORL1Q92673 2214 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 WNK2Q9Y3S1 2297 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 BPTFQ12830 3046 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 KNL1Q8NG31 2342 aa0.82□□□□□ -2.28
ITGB1-213ENST00000484088 TPRP12270 2363 aaKnown RBP0.81□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB130BP0DP73 79 aa0.81□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB130AP0DP74 79 aa0.81□□□□□ -2.28
ITGB1-213ENST00000484088 KLK9Q2XQG4 91 aa0.81□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB105AQ8NG35 78 aa0.81□□□□□ -2.28
ITGB1-213ENST00000484088 PRO0255Q9UI72 69 aa0.81□□□□□ -2.28
ITGB1-213ENST00000484088 AHCTF1Q8WYP5 2266 aa0.81□□□□□ -2.28
ITGB1-213ENST00000484088 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.281e-6■■□□□ 14.5
ITGB1-213ENST00000484088 PRLHP81277 87 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 CLPSL2Q6UWE3 100 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 APLNQ9ULZ1 77 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 CNOT1A5YKK6 2376 aaKnown RBP0.8□□□□□ -2.28
ITGB1-213ENST00000484088 TECTAO75443 2155 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 ASXL3Q9C0F0 2248 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 ABCA1O95477 2261 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 CACNA1BQ00975 2339 aa0.8□□□□□ -2.28
ITGB1-213ENST00000484088 FN1P02751 2386 aaKnown RBP0.79□□□□□ -2.28
ITGB1-213ENST00000484088 A8MTW9 85 aa0.79□□□□□ -2.28
ITGB1-213ENST00000484088 H0YGG7 62 aa0.79□□□□□ -2.28
ITGB1-213ENST00000484088 H3BUX3 64 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms