RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 H7C2G1 150 aa12.37□□□□□ -0.43
TRAPPC12-220ENST00000482645 PRO1854Q9UHT4 67 aa12.37□□□□□ -0.43
TRAPPC12-220ENST00000482645 IGLV6-57P01721 117 aa12.36□□□□□ -0.43
TRAPPC12-220ENST00000482645 Q1RN00 199 aa12.35□□□□□ -0.43
TRAPPC12-220ENST00000482645 TMEM126AQ9H061 195 aa12.35□□□□□ -0.43
TRAPPC12-220ENST00000482645 PSORS1C2Q9UIG4 136 aa12.35□□□□□ -0.43
TRAPPC12-220ENST00000482645 KRTAP4-5Q9BYR2 181 aa12.34□□□□□ -0.43
TRAPPC12-220ENST00000482645 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.44
TRAPPC12-220ENST00000482645 TRAV23DV6A0A075B6W5 121 aa12.33□□□□□ -0.44
TRAPPC12-220ENST00000482645 C1orf137Q5JT78 98 aa12.32□□□□□ -0.44
TRAPPC12-220ENST00000482645 SRRM2Q9UQ35 2752 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-220ENST00000482645 TSPAN13O95857 204 aa12.3□□□□□ -0.44
TRAPPC12-220ENST00000482645 KRTAP10-4P60372 401 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-220ENST00000482645 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
TRAPPC12-220ENST00000482645 PRYO14603 147 aa12.28□□□□□ -0.44
TRAPPC12-220ENST00000482645 KCNQ1DNQ9H478 68 aa12.28□□□□□ -0.44
TRAPPC12-220ENST00000482645 COL5A1-AS1Q5SY13 56 aa12.27□□□□□ -0.44
TRAPPC12-220ENST00000482645 REG3GQ6UW15 175 aa12.27□□□□□ -0.45
TRAPPC12-220ENST00000482645 CBY1Q9Y3M2 126 aa12.27□□□□□ -0.45
TRAPPC12-220ENST00000482645 ZNF73O43830 326 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC12-220ENST00000482645 NAA38Q9BRA0 125 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-220ENST00000482645 DIRC1Q969H9 104 aa12.25□□□□□ -0.45
TRAPPC12-220ENST00000482645 TAX1BP3O14907 124 aa12.24□□□□□ -0.45
TRAPPC12-220ENST00000482645 PSMB2P49721 201 aa12.24□□□□□ -0.45
TRAPPC12-220ENST00000482645 C6orf99Q4VX62 202 aa12.24□□□□□ -0.45
TRAPPC12-220ENST00000482645 ABCA13Q86UQ4 5058 aa12.23□□□□□ -0.45
TRAPPC12-220ENST00000482645 TRIAP1O43715 76 aa12.22□□□□□ -0.45
TRAPPC12-220ENST00000482645 RPL28P46779 137 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-220ENST00000482645 IGLV7-43P04211 117 aa12.21□□□□□ -0.45
TRAPPC12-220ENST00000482645 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.46
TRAPPC12-220ENST00000482645 BCE1O60756 84 aa12.21□□□□□ -0.46
TRAPPC12-220ENST00000482645 INAFM2P0DMQ5 153 aa12.2□□□□□ -0.46
TRAPPC12-220ENST00000482645 SPRR1AP35321 89 aa12.2□□□□□ -0.46
TRAPPC12-220ENST00000482645 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
TRAPPC12-220ENST00000482645 H3BUT2 72 aa12.19□□□□□ -0.46
TRAPPC12-220ENST00000482645 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
TRAPPC12-220ENST00000482645 C9orf118A6NHY6 69 aa12.18□□□□□ -0.46
TRAPPC12-220ENST00000482645 UBE2AP49459 152 aa12.18□□□□□ -0.46
TRAPPC12-220ENST00000482645 KRTAP4-16G5E9R7 235 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-220ENST00000482645 COX7BP24311 80 aa12.16□□□□□ -0.46
TRAPPC12-220ENST00000482645 PRLHP81277 87 aa12.16□□□□□ -0.46
TRAPPC12-220ENST00000482645 VAMP3Q15836 100 aa12.16□□□□□ -0.46
TRAPPC12-220ENST00000482645 COX6CP09669 75 aa12.15□□□□□ -0.46
TRAPPC12-220ENST00000482645 ELOF1P60002 83 aaKnown RBP12.15□□□□□ -0.46
TRAPPC12-220ENST00000482645 A0A1B0GV90 55 aa12.14□□□□□ -0.47
TRAPPC12-220ENST00000482645 B5MCH6 92 aa12.14□□□□□ -0.47
TRAPPC12-220ENST00000482645 Q6ZRX8 168 aa12.14□□□□□ -0.47
TRAPPC12-220ENST00000482645 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-220ENST00000482645 ZNF861PO60384 105 aa12.13□□□□□ -0.47
TRAPPC12-220ENST00000482645 SCGB1C2P0DMR2 95 aa12.13□□□□□ -0.47
TRAPPC12-220ENST00000482645 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
TRAPPC12-220ENST00000482645 TRBV7-6A0A0J9YX20 115 aa12.12□□□□□ -0.47
TRAPPC12-220ENST00000482645 CLEC2BQ92478 149 aa12.11□□□□□ -0.47
TRAPPC12-220ENST00000482645 A0A1W2PPM0 123 aa12.11□□□□□ -0.47
TRAPPC12-220ENST00000482645 PCLOQ9Y6V0 5065 aa12.1□□□□□ -0.47
TRAPPC12-220ENST00000482645 LYRM7Q5U5X0 104 aa12.1□□□□□ -0.47
TRAPPC12-220ENST00000482645 H0YGX0 51 aa12.09□□□□□ -0.47
TRAPPC12-220ENST00000482645 KRTAP13-1Q8IUC0 172 aa12.09□□□□□ -0.47
TRAPPC12-220ENST00000482645 FAM218AQ96MZ4 157 aa12.09□□□□□ -0.47
TRAPPC12-220ENST00000482645 MYCBP2O75592 4640 aa12.08□□□□□ -0.47
TRAPPC12-220ENST00000482645 FABP2P12104 132 aa12.08□□□□□ -0.48
TRAPPC12-220ENST00000482645 Q9BRP9 147 aa12.08□□□□□ -0.48
TRAPPC12-220ENST00000482645 HIGD2AQ9BW72 106 aa12.08□□□□□ -0.48
TRAPPC12-220ENST00000482645 H0Y9J4 135 aa12.07□□□□□ -0.48
TRAPPC12-220ENST00000482645 SMCR5Q8TEV8 140 aa12.06□□□□□ -0.48
TRAPPC12-220ENST00000482645 LINC00575Q6W349 94 aa12.06□□□□□ -0.48
TRAPPC12-220ENST00000482645 SLC25A20O43772 301 aa12.05□□□□□ -0.48
TRAPPC12-220ENST00000482645 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
TRAPPC12-220ENST00000482645 TCL1BO95988 128 aa12.04□□□□□ -0.48
TRAPPC12-220ENST00000482645 hADV29S1A0JD25 119 aa12.03□□□□□ -0.48
TRAPPC12-220ENST00000482645 LRP1Q07954 4544 aaKnown RBP12.02□□□□□ -0.48
TRAPPC12-220ENST00000482645 LST1O00453 97 aa12.02□□□□□ -0.48
TRAPPC12-220ENST00000482645 ERC2-IT1O76042 136 aa12.01□□□□□ -0.49
TRAPPC12-220ENST00000482645 ATXN8Q156A1 80 aa12.01□□□□□ -0.49
TRAPPC12-220ENST00000482645 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
TRAPPC12-220ENST00000482645 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
TRAPPC12-220ENST00000482645 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
TRAPPC12-220ENST00000482645 SNCGO76070 127 aa11.99□□□□□ -0.49
TRAPPC12-220ENST00000482645 DNAL4O96015 105 aa11.98□□□□□ -0.49
TRAPPC12-220ENST00000482645 A0A1B0GX51 115 aa11.97□□□□□ -0.49
TRAPPC12-220ENST00000482645 Q6ZQY7 126 aa11.97□□□□□ -0.49
TRAPPC12-220ENST00000482645 TRACP01848 142 aa11.96□□□□□ -0.49
TRAPPC12-220ENST00000482645 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.49
TRAPPC12-220ENST00000482645 K7EP34 96 aa11.96□□□□□ -0.5
TRAPPC12-220ENST00000482645 H3BMG7 143 aa11.93□□□□□ -0.5
TRAPPC12-220ENST00000482645 KRTAP1-4P0C5Y4 121 aa11.93□□□□□ -0.5
TRAPPC12-220ENST00000482645 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC12-220ENST00000482645 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
TRAPPC12-220ENST00000482645 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
TRAPPC12-220ENST00000482645 OXTP01178 125 aa11.91□□□□□ -0.5
TRAPPC12-220ENST00000482645 GTF2H5Q6ZYL4 71 aa11.91□□□□□ -0.5
TRAPPC12-220ENST00000482645 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
TRAPPC12-220ENST00000482645 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-220ENST00000482645 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-220ENST00000482645 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
TRAPPC12-220ENST00000482645 C9JAW5 83 aa11.89□□□□□ -0.51
TRAPPC12-220ENST00000482645 J3QL48 77 aa11.89□□□□□ -0.51
TRAPPC12-220ENST00000482645 MTURNQ8N3F0 131 aa11.89□□□□□ -0.51
TRAPPC12-220ENST00000482645 ORMDL1Q9P0S3 153 aa11.89□□□□□ -0.51
TRAPPC12-220ENST00000482645 GAGE2AQ6NT46 116 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms