RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
HLA-B-253ENST00000481849 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
HLA-B-253ENST00000481849 TRAV12-1A0A0B4J245 112 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 GAGE2AQ6NT46 116 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 FAM19A2Q8N3H0 131 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 LINC00337Q8N6G1 96 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 CHCHD1Q96BP2 118 aaKnown RBP5.1□□□□□ -1.59
HLA-B-253ENST00000481849 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
HLA-B-253ENST00000481849 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 IGLV9-49A0A0B4J1Y8 123 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 SNAPINO95295 136 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 CTAG1AP78358 180 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 SVBPQ8N300 66 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 KCNQ1DNQ9H478 68 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 NDUFA12Q9UI09 145 aa5.09□□□□□ -1.59
HLA-B-253ENST00000481849 MYMXA0A1B0GTQ4 84 aa5.08□□□□□ -1.6
HLA-B-253ENST00000481849 HSBP1O75506 76 aa5.08□□□□□ -1.6
HLA-B-253ENST00000481849 SPRR1AP35321 89 aa5.08□□□□□ -1.6
HLA-B-253ENST00000481849 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
HLA-B-253ENST00000481849 HERV-K104P63124 156 aa5.08□□□□□ -1.6
HLA-B-253ENST00000481849 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
HLA-B-253ENST00000481849 KRTAP4-16G5E9R7 235 aaPredicted RBP5.07□□□□□ -1.6
HLA-B-253ENST00000481849 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
HLA-B-253ENST00000481849 S100A12P80511 92 aa5.07□□□□□ -1.6
HLA-B-253ENST00000481849 MOBPQ13875 183 aa5.07□□□□□ -1.6
HLA-B-253ENST00000481849 YPEL4Q96NS1 127 aa5.07□□□□□ -1.6
HLA-B-253ENST00000481849 MAP1LC3CQ9BXW4 147 aa5.07□□□□□ -1.6
HLA-B-253ENST00000481849 LINC00587B1AMM8 73 aa5.06□□□□□ -1.6
HLA-B-253ENST00000481849 DDTP30046 118 aa5.06□□□□□ -1.6
HLA-B-253ENST00000481849 KRTAP13-3Q3SY46 172 aa5.06□□□□□ -1.6
HLA-B-253ENST00000481849 LEPROTO15243 131 aa5.05□□□□□ -1.6
HLA-B-253ENST00000481849 SPINK1P00995 79 aa5.05□□□□□ -1.6
HLA-B-253ENST00000481849 LINC00483Q53H64 154 aa5.05□□□□□ -1.6
HLA-B-253ENST00000481849 PMCHL2Q9BQD1 86 aa5.05□□□□□ -1.6
HLA-B-253ENST00000481849 FABP4P15090 132 aa5.04□□□□□ -1.6
HLA-B-253ENST00000481849 NPC2P61916 151 aa5.04□□□□□ -1.6
HLA-B-253ENST00000481849 S100A7L2Q5SY68 101 aa5.04□□□□□ -1.6
HLA-B-253ENST00000481849 Q9BRP9 147 aa5.04□□□□□ -1.6
HLA-B-253ENST00000481849 J3QQQ9 107 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 SERF1AO75920 110 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 LEPROTL1O95214 131 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 TRGC2P03986 189 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 LGALS3P17931 250 aaKnown RBP5.03□□□□□ -1.6
HLA-B-253ENST00000481849 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 C9orf153Q5TBE3 101 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 MIEN1Q9BRT3 115 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
HLA-B-253ENST00000481849 TRBV10-2A0A0K0K1G8 114 aa5.02□□□□□ -1.61
HLA-B-253ENST00000481849 PLNP26678 52 aa5.02□□□□□ -1.61
HLA-B-253ENST00000481849 HERVK_113P61574 105 aa5.02□□□□□ -1.61
HLA-B-253ENST00000481849 Q6ZRX8 168 aa5.02□□□□□ -1.61
HLA-B-253ENST00000481849 Q8N377 158 aa5.02□□□□□ -1.61
HLA-B-253ENST00000481849 SPANXB1Q9NS25 103 aaPredicted RBP5.02□□□□□ -1.61
HLA-B-253ENST00000481849 TRAV23DV6A0A075B6W5 121 aa5.01□□□□□ -1.61
HLA-B-253ENST00000481849 DPM2O94777 84 aa5.01□□□□□ -1.61
HLA-B-253ENST00000481849 IGKCP01834 107 aa5.01□□□□□ -1.61
HLA-B-253ENST00000481849 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
HLA-B-253ENST00000481849 SSBP3-AS1Q7Z2R9 100 aa5.01□□□□□ -1.61
HLA-B-253ENST00000481849 ST20-AS1Q8NBB2 130 aa5.01□□□□□ -1.61
HLA-B-253ENST00000481849 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 SLC25A20O43772 301 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 IGLV6-57P01721 117 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 NMUP48645 174 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 LINC01547P58512 204 aaPredicted RBP5□□□□□ -1.61
HLA-B-253ENST00000481849 SOSTDC1Q6X4U4 206 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 HSPB8Q9UJY1 196 aa5□□□□□ -1.61
HLA-B-253ENST00000481849 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
HLA-B-253ENST00000481849 NDUFC2O95298 119 aa4.99□□□□□ -1.61
HLA-B-253ENST00000481849 JOSD1Q15040 202 aaPredicted RBP4.99□□□□□ -1.61
HLA-B-253ENST00000481849 ADAMTSL4-AS1Q5T5F5 129 aa4.99□□□□□ -1.61
HLA-B-253ENST00000481849 A0A0J9YXY3 114 aa4.98□□□□□ -1.61
HLA-B-253ENST00000481849 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
HLA-B-253ENST00000481849 HRCT1Q6UXD1 115 aa4.98□□□□□ -1.61
HLA-B-253ENST00000481849 LOC105371267A0A1B0GV96 52 aa4.97□□□□□ -1.61
HLA-B-253ENST00000481849 OR13C6PQ8NH95 151 aa4.97□□□□□ -1.61
HLA-B-253ENST00000481849 COLCA2A8K830 154 aa4.96□□□□□ -1.62
HLA-B-253ENST00000481849 HINT1P49773 126 aaPredicted RBP4.96□□□□□ -1.62
HLA-B-253ENST00000481849 E9PLD3 99 aa4.95□□□□□ -1.62
HLA-B-253ENST00000481849 LINC00308Q8TCZ7 52 aa4.94□□□□□ -1.62
HLA-B-253ENST00000481849 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
HLA-B-253ENST00000481849 LITAFQ99732 161 aa4.93□□□□□ -1.62
HLA-B-253ENST00000481849 SPANXCQ9NY87 97 aa4.93□□□□□ -1.62
HLA-B-253ENST00000481849 SYS1-DBNDD2H3BUS1 97 aa4.92□□□□□ -1.62
HLA-B-253ENST00000481849 DEFB105AQ8NG35 78 aa4.92□□□□□ -1.62
HLA-B-253ENST00000481849 TTTY13Q9BZ97 58 aa4.92□□□□□ -1.62
HLA-B-253ENST00000481849 CBY1Q9Y3M2 126 aa4.92□□□□□ -1.62
HLA-B-253ENST00000481849 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 H7C2G1 150 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 COX7BP24311 80 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 Q1RN00 199 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 SLC25A34Q6PIV7 304 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 DHRS4-AS1Q9P1J3 65 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
HLA-B-253ENST00000481849 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms