RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
HSPG2-210ENST00000481644 ANKRD39Q53RE8 183 aa10.93□□□□□ -0.66
HSPG2-210ENST00000481644 C3orf22Q8N5N4 141 aa10.93□□□□□ -0.66
HSPG2-210ENST00000481644 S100A2P29034 98 aa10.91□□□□□ -0.66
HSPG2-210ENST00000481644 SCGB1D4Q6XE38 83 aa10.91□□□□□ -0.66
HSPG2-210ENST00000481644 Q6ZRX8 168 aa10.91□□□□□ -0.66
HSPG2-210ENST00000481644 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
HSPG2-210ENST00000481644 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
HSPG2-210ENST00000481644 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
HSPG2-210ENST00000481644 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
HSPG2-210ENST00000481644 HIST1H2BLQ99880 126 aa10.89□□□□□ -0.67
HSPG2-210ENST00000481644 Q9BRP9 147 aa10.89□□□□□ -0.67
HSPG2-210ENST00000481644 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
HSPG2-210ENST00000481644 ERC2-IT1O76042 136 aa10.88□□□□□ -0.67
HSPG2-210ENST00000481644 S100A6P06703 90 aa10.88□□□□□ -0.67
HSPG2-210ENST00000481644 JOSD1Q15040 202 aaPredicted RBP10.87□□□□□ -0.67
HSPG2-210ENST00000481644 SPANXDQ9BXN6 97 aa10.87□□□□□ -0.67
HSPG2-210ENST00000481644 LINC00483Q53H64 154 aa10.86□□□□□ -0.67
HSPG2-210ENST00000481644 GAGE2AQ6NT46 116 aa10.86□□□□□ -0.67
HSPG2-210ENST00000481644 HINT1P49773 126 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-210ENST00000481644 SNRPEP62304 92 aaKnown RBP10.85□□□□□ -0.67
HSPG2-210ENST00000481644 PCP2Q8IVA1 136 aa10.85□□□□□ -0.67
HSPG2-210ENST00000481644 LPAP08519 4548 aa10.84□□□□□ -0.67
HSPG2-210ENST00000481644 LINC00518Q8N0U6 118 aa10.84□□□□□ -0.67
HSPG2-210ENST00000481644 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
HSPG2-210ENST00000481644 CTAG1AP78358 180 aa10.83□□□□□ -0.68
HSPG2-210ENST00000481644 IFITM1P13164 125 aa10.81□□□□□ -0.68
HSPG2-210ENST00000481644 SPAG11AQ6PDA7 123 aa10.81□□□□□ -0.68
HSPG2-210ENST00000481644 Q6ZVH6 145 aa10.81□□□□□ -0.68
HSPG2-210ENST00000481644 RETNLBQ9BQ08 111 aa10.81□□□□□ -0.68
HSPG2-210ENST00000481644 HSBP1L1C9JCN9 74 aa10.8□□□□□ -0.68
HSPG2-210ENST00000481644 C4orf48Q5BLP8 95 aa10.8□□□□□ -0.68
HSPG2-210ENST00000481644 Q8NBF4 154 aa10.8□□□□□ -0.68
HSPG2-210ENST00000481644 IGLV9-49A0A0B4J1Y8 123 aa10.78□□□□□ -0.68
HSPG2-210ENST00000481644 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
HSPG2-210ENST00000481644 MOBPQ13875 183 aa10.77□□□□□ -0.69
HSPG2-210ENST00000481644 C6orf99Q4VX62 202 aa10.76□□□□□ -0.69
HSPG2-210ENST00000481644 ST20-AS1Q8NBB2 130 aa10.75□□□□□ -0.69
HSPG2-210ENST00000481644 DHRS4-AS1Q9P1J3 65 aa10.75□□□□□ -0.69
HSPG2-210ENST00000481644 A6NDN8 102 aa10.74□□□□□ -0.69
HSPG2-210ENST00000481644 C5orf52A6NGY3 159 aa10.74□□□□□ -0.69
HSPG2-210ENST00000481644 COX7BP24311 80 aa10.74□□□□□ -0.69
HSPG2-210ENST00000481644 ELOF1P60002 83 aaKnown RBP10.74□□□□□ -0.69
HSPG2-210ENST00000481644 SCGB1D1O95968 90 aa10.73□□□□□ -0.69
HSPG2-210ENST00000481644 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
HSPG2-210ENST00000481644 SPINK1P00995 79 aa10.71□□□□□ -0.69
HSPG2-210ENST00000481644 C9orf153Q5TBE3 101 aa10.71□□□□□ -0.69
HSPG2-210ENST00000481644 RNF213Q63HN8 5207 aa10.7□□□□□ -0.7
HSPG2-210ENST00000481644 IGLV7-46A0A075B6I9 117 aa10.7□□□□□ -0.7
HSPG2-210ENST00000481644 TRBV7-6A0A0J9YX20 115 aa10.69□□□□□ -0.7
HSPG2-210ENST00000481644 TRAV13-2A0A0B4J235 113 aa10.68□□□□□ -0.7
HSPG2-210ENST00000481644 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
HSPG2-210ENST00000481644 SPRR1BP22528 89 aa10.67□□□□□ -0.7
HSPG2-210ENST00000481644 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
HSPG2-210ENST00000481644 TPRXLQ17RH7 258 aa10.65□□□□□ -0.7
HSPG2-210ENST00000481644 RPS29P62273 56 aaKnown RBP10.64□□□□□ -0.71
HSPG2-210ENST00000481644 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-210ENST00000481644 SMIM11BQ8TCY0 68 aa10.64□□□□□ -0.71
HSPG2-210ENST00000481644 A4D1N5 150 aa10.63□□□□□ -0.71
HSPG2-210ENST00000481644 TAL2Q16559 108 aa10.63□□□□□ -0.71
HSPG2-210ENST00000481644 DEFB105AQ8NG35 78 aa10.63□□□□□ -0.71
HSPG2-210ENST00000481644 LAMTOR3Q9UHA4 124 aa10.63□□□□□ -0.71
HSPG2-210ENST00000481644 COX8AP10176 69 aa10.62□□□□□ -0.71
HSPG2-210ENST00000481644 CDIP1Q9H305 208 aa10.62□□□□□ -0.71
HSPG2-210ENST00000481644 Q8N377 158 aa10.6□□□□□ -0.71
HSPG2-210ENST00000481644 HIST1H4GQ99525 98 aa10.6□□□□□ -0.71
HSPG2-210ENST00000481644 TEX49A0A1B0GTD5 131 aa10.59□□□□□ -0.71
HSPG2-210ENST00000481644 Q1RN00 199 aa10.58□□□□□ -0.72
HSPG2-210ENST00000481644 NHP2Q9NX24 153 aaKnown RBP10.58□□□□□ -0.72
HSPG2-210ENST00000481644 DLEU1O43261 78 aa10.57□□□□□ -0.72
HSPG2-210ENST00000481644 SLC25A20O43772 301 aa10.57□□□□□ -0.72
HSPG2-210ENST00000481644 PAM16Q9Y3D7 125 aa10.57□□□□□ -0.72
HSPG2-210ENST00000481644 VAMP3Q15836 100 aa10.56□□□□□ -0.72
HSPG2-210ENST00000481644 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
HSPG2-210ENST00000481644 SPATA45Q537H7 98 aa10.55□□□□□ -0.72
HSPG2-210ENST00000481644 C14orf144Q96I85 54 aa10.55□□□□□ -0.72
HSPG2-210ENST00000481644 C12orf57Q99622 126 aa10.55□□□□□ -0.72
HSPG2-210ENST00000481644 LINC01547P58512 204 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-210ENST00000481644 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
HSPG2-210ENST00000481644 HRCT1Q6UXD1 115 aa10.53□□□□□ -0.72
HSPG2-210ENST00000481644 KRTAP13-3Q3SY46 172 aa10.52□□□□□ -0.73
HSPG2-210ENST00000481644 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
HSPG2-210ENST00000481644 PRO1933Q9H354 126 aa10.51□□□□□ -0.73
HSPG2-210ENST00000481644 LINC00575Q6W349 94 aa10.5□□□□□ -0.73
HSPG2-210ENST00000481644 LIMD2Q9BT23 127 aa10.5□□□□□ -0.73
HSPG2-210ENST00000481644 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
HSPG2-210ENST00000481644 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
HSPG2-210ENST00000481644 H7C2G1 150 aa10.46□□□□□ -0.73
HSPG2-210ENST00000481644 CD164Q04900 197 aa10.46□□□□□ -0.73
HSPG2-210ENST00000481644 BVES-AS1Q5T3Y7 98 aa10.45□□□□□ -0.74
HSPG2-210ENST00000481644 Q6ZQY7 126 aa10.45□□□□□ -0.74
HSPG2-210ENST00000481644 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
HSPG2-210ENST00000481644 RAB37Q96AX2 223 aa10.45□□□□□ -0.74
HSPG2-210ENST00000481644 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
HSPG2-210ENST00000481644 CFC1P0CG37 223 aa10.44□□□□□ -0.74
HSPG2-210ENST00000481644 MUC2Q02817 5179 aa10.43□□□□□ -0.74
HSPG2-210ENST00000481644 F8WEM9 126 aa10.42□□□□□ -0.74
HSPG2-210ENST00000481644 A0A0B4J2C4 111 aa10.41□□□□□ -0.74
HSPG2-210ENST00000481644 A0A0G2JQZ4 141 aa10.41□□□□□ -0.74
HSPG2-210ENST00000481644 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms