RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 C1orf196B1AJZ1 125 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 MRPS36P82909 103 aaKnown RBP2.71□□□□□ -1.98
UPF3A-205ENST00000479712 IFITM2Q01629 132 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 SS18Q15532 418 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 MRPL54Q6P161 138 aaKnown RBP2.71□□□□□ -1.98
UPF3A-205ENST00000479712 CLPSL2Q6UWE3 100 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 SDIM1Q6ZPB5 146 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 ADM2Q7Z4H4 148 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 ZNF664Q8N3J9 261 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 LINC00304Q8N9R0 145 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 UBE2D4Q9Y2X8 147 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 LINC01549A6NIU2 74 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 D6R8Y8 96 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 NPYP01303 97 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 G0S2P27469 103 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 C10orf91Q5T1B1 145 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 C3orf22Q8N5N4 141 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 PRELID3AQ96N28 172 aa2.7□□□□□ -1.98
UPF3A-205ENST00000479712 CARHSP1Q9Y2V2 147 aaKnown RBP2.7□□□□□ -1.98
UPF3A-205ENST00000479712 A6NED7 52 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 APOMO95445 188 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 MT-ND6P03923 174 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 ADCYAP1P18509 176 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 IFI27P40305 119 aaPredicted RBP2.69□□□□□ -1.98
UPF3A-205ENST00000479712 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 RHEBQ15382 184 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 Q8N8P6 123 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 MAP1LC3AQ9H492 121 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 NXT2Q9NPJ8 142 aaKnown RBP2.69□□□□□ -1.98
UPF3A-205ENST00000479712 LINC00474Q9P2X8 69 aa2.69□□□□□ -1.98
UPF3A-205ENST00000479712 IGKV2-24A0A0C4DH68 120 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 COX7A2LO14548 114 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 HRES1P13985 223 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 S100PP25815 95 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 XCL1P47992 114 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 Q6ZUT4 128 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 COMMD7Q86VX2 200 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 OR10D4PQ8NGN7 298 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 GNB1LQ9BYB4 327 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 PLAC8Q9NZF1 115 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 CYSLTR1Q9Y271 337 aa2.68□□□□□ -1.98
UPF3A-205ENST00000479712 IGKV3OR2-268A0A0C4DH90 116 aa2.67□□□□□ -1.98
UPF3A-205ENST00000479712 LINC01546A6NGU7 62 aa2.67□□□□□ -1.98
UPF3A-205ENST00000479712 CRYGAP11844 174 aa2.67□□□□□ -1.98
UPF3A-205ENST00000479712 RPL39P62891 51 aaKnown RBP2.67□□□□□ -1.98
UPF3A-205ENST00000479712 SEC11AP67812 179 aa2.67□□□□□ -1.98
UPF3A-205ENST00000479712 TMEM141Q96I45 108 aa2.67□□□□□ -1.98
UPF3A-205ENST00000479712 CARD19Q96LW7 228 aa2.67□□□□□ -1.98
UPF3A-205ENST00000479712 TGIF2-C20orf24A0A0A6YYL0 155 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 TRAV13-1A0A0B4J241 112 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 LOC107984640A0A0U1RRK4 108 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 IGIPA6NJ69 53 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 M0R2T5 61 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 COX6A2Q02221 97 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 NDUFA5Q16718 116 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 SVBPQ8N300 66 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 TOMM6Q96B49 74 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 AMELXQ99217 191 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 C2orf88Q9BSF0 95 aa2.66□□□□□ -1.98
UPF3A-205ENST00000479712 MRPL35Q9NZE8 188 aaKnown RBP2.66□□□□□ -1.98
UPF3A-205ENST00000479712 A0A1W2PNN7 141 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 NDUFA1O15239 70 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 IGLV6-57P01721 117 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 UBE2D1P51668 147 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 SPAG11BQ08648 103 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 C5orf38Q86SI9 138 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
UPF3A-205ENST00000479712 A0A096LNI7 61 aa2.64□□□□□ -1.99
UPF3A-205ENST00000479712 TRBV30A0A0K0K1B3 111 aa2.64□□□□□ -1.99
UPF3A-205ENST00000479712 HERVK_113P63121 156 aa2.64□□□□□ -1.99
UPF3A-205ENST00000479712 DPH3Q96FX2 82 aa2.64□□□□□ -1.99
UPF3A-205ENST00000479712 TINCRA0A1B0GVN0 87 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 APOC3P02656 99 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 RAB5BP61020 215 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 FABP9Q0Z7S8 132 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 Q8IZM0 81 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 SCGB3A1Q96QR1 104 aa2.63□□□□□ -1.99
UPF3A-205ENST00000479712 LINC00614P0C842 121 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
UPF3A-205ENST00000479712 C18orf32Q8TCD1 76 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 LINC00526Q96FQ7 95 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 PACRGQ96M98 296 aaPredicted RBP2.62□□□□□ -1.99
UPF3A-205ENST00000479712 CST9LQ9H4G1 147 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 SMCO4Q9NRQ5 59 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 C6orf48Q9UBA6 75 aa2.62□□□□□ -1.99
UPF3A-205ENST00000479712 F8VRH5 84 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 H3BRM9 83 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 HBDP02042 147 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 IGKV4-1P06312 121 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 IGLC3P0DOY3 106 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 CKS1BP61024 79 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
UPF3A-205ENST00000479712 SFTA2Q6UW10 78 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 UNQ6190/PRO20217Q6UXQ8 127 aa2.61□□□□□ -1.99
UPF3A-205ENST00000479712 CHCHD1Q96BP2 118 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms