RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 A8MUN3 132 aa12.91□□□□□ -0.34
ABCA2-217ENST00000479446 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
ABCA2-217ENST00000479446 CYP4F30PQ9H0H9 118 aa12.89□□□□□ -0.35
ABCA2-217ENST00000479446 IGLV8-61A0A075B6I0 122 aa12.88□□□□□ -0.35
ABCA2-217ENST00000479446 USP24Q9UPU5 2620 aa12.87□□□□□ -0.35
ABCA2-217ENST00000479446 TLX1NBP0CAT3 122 aa12.86□□□□□ -0.35
ABCA2-217ENST00000479446 C8orf17Q9NRJ1 99 aa12.86□□□□□ -0.35
ABCA2-217ENST00000479446 PLA2G2DQ9UNK4 145 aa12.86□□□□□ -0.35
ABCA2-217ENST00000479446 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
ABCA2-217ENST00000479446 H7BZZ5 65 aa12.83□□□□□ -0.36
ABCA2-217ENST00000479446 LINC01600Q96MT4 127 aa12.82□□□□□ -0.36
ABCA2-217ENST00000479446 K7EIL1 84 aa12.82□□□□□ -0.36
ABCA2-217ENST00000479446 FLNBO75369 2602 aaKnown RBP12.81□□□□□ -0.36
ABCA2-217ENST00000479446 A0A1B0GVX0 72 aa12.8□□□□□ -0.36
ABCA2-217ENST00000479446 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
ABCA2-217ENST00000479446 SSBP3-AS1Q7Z2R9 100 aa12.79□□□□□ -0.36
ABCA2-217ENST00000479446 ZNF861PO60384 105 aa12.79□□□□□ -0.36
ABCA2-217ENST00000479446 WWC2-AS2Q96NR7 200 aa12.79□□□□□ -0.36
ABCA2-217ENST00000479446 MGAM2Q2M2H8 2515 aa12.78□□□□□ -0.36
ABCA2-217ENST00000479446 UQCR11O14957 56 aa12.77□□□□□ -0.36
ABCA2-217ENST00000479446 C9orf163Q8N9P6 203 aa12.77□□□□□ -0.37
ABCA2-217ENST00000479446 A0A0G2JQZ4 141 aa12.76□□□□□ -0.37
ABCA2-217ENST00000479446 A0A1W2PNN7 141 aa12.76□□□□□ -0.37
ABCA2-217ENST00000479446 DSCR10P59022 87 aa12.76□□□□□ -0.37
ABCA2-217ENST00000479446 HECTD1Q9ULT8 2610 aa12.73□□□□□ -0.37
ABCA2-217ENST00000479446 A0A1W2PNM2 257 aa12.72□□□□□ -0.37
ABCA2-217ENST00000479446 ZNF575Q86XF7 245 aa12.71□□□□□ -0.38
ABCA2-217ENST00000479446 A0A087WTM6 91 aa12.7□□□□□ -0.38
ABCA2-217ENST00000479446 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
ABCA2-217ENST00000479446 OBSCN-AS1Q96MR7 158 aa12.68□□□□□ -0.38
ABCA2-217ENST00000479446 DNAH12Q6ZR08 3092 aa12.67□□□□□ -0.38
ABCA2-217ENST00000479446 IGLV5-48A0A075B6I7 105 aa12.65□□□□□ -0.38
ABCA2-217ENST00000479446 CNBPP62633 177 aaKnown RBP12.65□□□□□ -0.38
ABCA2-217ENST00000479446 CASC10Q5T4H9 136 aa12.64□□□□□ -0.39
ABCA2-217ENST00000479446 LINC00304Q8N9R0 145 aa12.64□□□□□ -0.39
ABCA2-217ENST00000479446 MIR22HGQ0VDD5 57 aa12.63□□□□□ -0.39
ABCA2-217ENST00000479446 BPTFQ12830 3046 aa12.63□□□□□ -0.39
ABCA2-217ENST00000479446 J3QL48 77 aa12.62□□□□□ -0.39
ABCA2-217ENST00000479446 SPRR4Q96PI1 79 aa12.62□□□□□ -0.39
ABCA2-217ENST00000479446 KRTAP1-3Q8IUG1 177 aa12.61□□□□□ -0.39
ABCA2-217ENST00000479446 ANAPC11Q9NYG5 84 aa12.61□□□□□ -0.39
ABCA2-217ENST00000479446 SPANXA2-OT1Q8N9U9 137 aa12.6□□□□□ -0.39
ABCA2-217ENST00000479446 IGLV5-37A0A075B6J1 123 aa12.6□□□□□ -0.39
ABCA2-217ENST00000479446 IGLV7-43P04211 117 aa12.59□□□□□ -0.39
ABCA2-217ENST00000479446 SPINT4Q6UDR6 99 aa12.59□□□□□ -0.39
ABCA2-217ENST00000479446 PSORS1C2Q9UIG4 136 aa12.59□□□□□ -0.39
ABCA2-217ENST00000479446 APLNQ9ULZ1 77 aa12.54□□□□□ -0.4
ABCA2-217ENST00000479446 FAM104AQ969W3 186 aa12.54□□□□□ -0.4
ABCA2-217ENST00000479446 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
ABCA2-217ENST00000479446 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.4
ABCA2-217ENST00000479446 OCR1Q9BZK8 76 aa12.51□□□□□ -0.41
ABCA2-217ENST00000479446 ATRQ13535 2644 aa12.51□□□□□ -0.41
ABCA2-217ENST00000479446 C9orf92A6NGG3 77 aa12.5□□□□□ -0.41
ABCA2-217ENST00000479446 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
ABCA2-217ENST00000479446 MAST4O15021 2626 aa12.46□□□□□ -0.41
ABCA2-217ENST00000479446 CD164Q04900 197 aa12.45□□□□□ -0.42
ABCA2-217ENST00000479446 KTN1-AS1Q86SY8 53 aa12.45□□□□□ -0.42
ABCA2-217ENST00000479446 CRIPTQ9P021 101 aa12.44□□□□□ -0.42
ABCA2-217ENST00000479446 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
ABCA2-217ENST00000479446 COX6B2Q6YFQ2 88 aa12.41□□□□□ -0.42
ABCA2-217ENST00000479446 SMR3BP02814 79 aaPredicted RBP12.41□□□□□ -0.42
ABCA2-217ENST00000479446 CR1P17927 2039 aa12.4□□□□□ -0.42
ABCA2-217ENST00000479446 CDC42SE1Q9NRR8 79 aa12.39□□□□□ -0.43
ABCA2-217ENST00000479446 LCA10Q71F78 164 aa12.37□□□□□ -0.43
ABCA2-217ENST00000479446 Q1T7F1 81 aa12.35□□□□□ -0.43
ABCA2-217ENST00000479446 Q8N1X5 172 aa12.35□□□□□ -0.43
ABCA2-217ENST00000479446 PRR26Q8N8Z3 221 aa12.32□□□□□ -0.44
ABCA2-217ENST00000479446 HELZ2Q9BYK8 2649 aaKnown RBP12.28□□□□□ -0.44
ABCA2-217ENST00000479446 IGLV7-46A0A075B6I9 117 aa12.28□□□□□ -0.44
ABCA2-217ENST00000479446 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
ABCA2-217ENST00000479446 CENPEQ02224 2701 aa12.26□□□□□ -0.45
ABCA2-217ENST00000479446 WIPF1O43516 503 aa12.25□□□□□ -0.45
ABCA2-217ENST00000479446 RBM12B-AS1Q9P1G2 102 aa12.25□□□□□ -0.45
ABCA2-217ENST00000479446 Q8NDZ9 215 aa12.25□□□□□ -0.45
ABCA2-217ENST00000479446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.24□□□□□ -0.45
ABCA2-217ENST00000479446 SPRR1AP35321 89 aa12.22□□□□□ -0.45
ABCA2-217ENST00000479446 TNP2Q05952 138 aa12.21□□□□□ -0.45
ABCA2-217ENST00000479446 CFAP46Q8IYW2 2715 aa12.2□□□□□ -0.46
ABCA2-217ENST00000479446 A0A0D9SG42 100 aa12.2□□□□□ -0.46
ABCA2-217ENST00000479446 HRES1P13985 223 aa12.18□□□□□ -0.46
ABCA2-217ENST00000479446 MMP24-AS1A0A0U1RRL7 71 aa12.17□□□□□ -0.46
ABCA2-217ENST00000479446 AKAP13Q12802 2813 aa12.17□□□□□ -0.46
ABCA2-217ENST00000479446 Q75L30 129 aa12.14□□□□□ -0.47
ABCA2-217ENST00000479446 LINC01554Q52M75 96 aa12.13□□□□□ -0.47
ABCA2-217ENST00000479446 C5orf42Q9H799 3197 aa12.12□□□□□ -0.47
ABCA2-217ENST00000479446 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
ABCA2-217ENST00000479446 CYSTM1Q9H1C7 97 aa12.11□□□□□ -0.47
ABCA2-217ENST00000479446 UTRNP46939 3433 aa12.1□□□□□ -0.47
ABCA2-217ENST00000479446 Q5XG85 94 aa12.09□□□□□ -0.47
ABCA2-217ENST00000479446 Q8N9P0 234 aaPredicted RBP12.09□□□□□ -0.47
ABCA2-217ENST00000479446 SPRR1BP22528 89 aa12.08□□□□□ -0.48
ABCA2-217ENST00000479446 LINC01558Q9Y6Z2 57 aa12.08□□□□□ -0.48
ABCA2-217ENST00000479446 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
ABCA2-217ENST00000479446 STAB1Q9NY15 2570 aa12.08□□□□□ -0.48
ABCA2-217ENST00000479446 CHD6Q8TD26 2715 aa12.08□□□□□ -0.48
ABCA2-217ENST00000479446 CHD9Q3L8U1 2897 aa12.07□□□□□ -0.48
ABCA2-217ENST00000479446 A0A1B0GU33 70 aa12.06□□□□□ -0.48
ABCA2-217ENST00000479446 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
ABCA2-217ENST00000479446 LINC00472Q9H8W2 130 aa12.05□□□□□ -0.48
ABCA2-217ENST00000479446 PCNTO95613 3336 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms