RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ZNF575Q86XF7 245 aa9.54□□□□□ -0.88
NPHP4-208ENST00000478423 ITPR1Q14643 2758 aa9.53□□□□□ -0.88
NPHP4-208ENST00000478423 ATP5EP56381 51 aaPredicted RBP9.53□□□□□ -0.88
NPHP4-208ENST00000478423 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
NPHP4-208ENST00000478423 TRBV7-7A0A0K0K1E9 115 aa9.53□□□□□ -0.88
NPHP4-208ENST00000478423 PRR34Q9NV39 138 aa9.53□□□□□ -0.88
NPHP4-208ENST00000478423 ZZEF1O43149 2961 aa9.53□□□□□ -0.88
NPHP4-208ENST00000478423 PHF5AQ7RTV0 110 aaKnown RBP9.53□□□□□ -0.88
NPHP4-208ENST00000478423 Q6ZRX8 168 aa9.52□□□□□ -0.88
NPHP4-208ENST00000478423 BAHCC1Q9P281 2608 aa9.52□□□□□ -0.89
NPHP4-208ENST00000478423 VPREB1P12018 145 aa9.52□□□□□ -0.89
NPHP4-208ENST00000478423 CHTF8P0CG12 524 aa9.52□□□□□ -0.89
NPHP4-208ENST00000478423 NSD1Q96L73 2696 aaPredicted RBP9.51□□□□□ -0.89
NPHP4-208ENST00000478423 WDFY3Q8IZQ1 3526 aa9.51□□□□□ -0.89
NPHP4-208ENST00000478423 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
NPHP4-208ENST00000478423 CXCL6P80162 114 aa9.49□□□□□ -0.89
NPHP4-208ENST00000478423 IGLV6-57P01721 117 aa9.48□□□□□ -0.89
NPHP4-208ENST00000478423 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
NPHP4-208ENST00000478423 LOC400499M0QZD8 3231 aa9.47□□□□□ -0.89
NPHP4-208ENST00000478423 TMEM254Q8TBM7 123 aa9.47□□□□□ -0.89
NPHP4-208ENST00000478423 CR1P17927 2039 aa9.47□□□□□ -0.89
NPHP4-208ENST00000478423 Q6ZQT0 140 aa9.46□□□□□ -0.89
NPHP4-208ENST00000478423 FAM168BA1KXE4 195 aa9.46□□□□□ -0.9
NPHP4-208ENST00000478423 HCG22E2RYF7 251 aa9.46□□□□□ -0.9
NPHP4-208ENST00000478423 RTL8CO15255 209 aa9.46□□□□□ -0.9
NPHP4-208ENST00000478423 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
NPHP4-208ENST00000478423 MOBPQ13875 183 aa9.45□□□□□ -0.9
NPHP4-208ENST00000478423 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
NPHP4-208ENST00000478423 Q8NBF4 154 aa9.45□□□□□ -0.9
NPHP4-208ENST00000478423 SERTAD4-AS1Q5TG53 156 aa9.45□□□□□ -0.9
NPHP4-208ENST00000478423 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
NPHP4-208ENST00000478423 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
NPHP4-208ENST00000478423 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
NPHP4-208ENST00000478423 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
NPHP4-208ENST00000478423 LOC110117498A0A087WWA1 95 aa9.41□□□□□ -0.9
NPHP4-208ENST00000478423 H0Y9P7 68 aa9.41□□□□□ -0.9
NPHP4-208ENST00000478423 V9GYY9 64 aa9.41□□□□□ -0.9
NPHP4-208ENST00000478423 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
NPHP4-208ENST00000478423 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
NPHP4-208ENST00000478423 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
NPHP4-208ENST00000478423 SMIM26A0A096LP01 95 aa9.4□□□□□ -0.9
NPHP4-208ENST00000478423 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
NPHP4-208ENST00000478423 A0A1B0GW54 56 aa9.39□□□□□ -0.91
NPHP4-208ENST00000478423 KCNQ1DNQ9H478 68 aa9.38□□□□□ -0.91
NPHP4-208ENST00000478423 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
NPHP4-208ENST00000478423 ASH1LQ9NR48 2969 aaKnown RBP9.37□□□□□ -0.91
NPHP4-208ENST00000478423 SERP1Q9Y6X1 66 aa9.37□□□□□ -0.91
NPHP4-208ENST00000478423 LRBAP50851 2863 aa9.37□□□□□ -0.91
NPHP4-208ENST00000478423 IGLV1-50A0A075B6I6 118 aa9.37□□□□□ -0.91
NPHP4-208ENST00000478423 BCE1O60756 84 aa9.36□□□□□ -0.91
NPHP4-208ENST00000478423 LIMD2Q9BT23 127 aa9.36□□□□□ -0.91
NPHP4-208ENST00000478423 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
NPHP4-208ENST00000478423 DCHS1Q96JQ0 3298 aa9.35□□□□□ -0.91
NPHP4-208ENST00000478423 A6NED7 52 aa9.34□□□□□ -0.91
NPHP4-208ENST00000478423 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
NPHP4-208ENST00000478423 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
NPHP4-208ENST00000478423 C1orf64Q8NEQ6 169 aa9.32□□□□□ -0.92
NPHP4-208ENST00000478423 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
NPHP4-208ENST00000478423 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
NPHP4-208ENST00000478423 ASPMQ8IZT6 3477 aa9.31□□□□□ -0.92
NPHP4-208ENST00000478423 CRYGAP11844 174 aa9.31□□□□□ -0.92
NPHP4-208ENST00000478423 TNRC18O15417 2968 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-208ENST00000478423 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
NPHP4-208ENST00000478423 UTP20O75691 2785 aaKnown RBP9.3□□□□□ -0.92
NPHP4-208ENST00000478423 DMXL1Q9Y485 3027 aa9.3□□□□□ -0.92
NPHP4-208ENST00000478423 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
NPHP4-208ENST00000478423 STAB2Q8WWQ8 2551 aa9.29□□□□□ -0.92
NPHP4-208ENST00000478423 TRBV7-4A0A0J9YYF1 115 aa9.29□□□□□ -0.92
NPHP4-208ENST00000478423 SVIPQ8NHG7 77 aa9.28□□□□□ -0.92
NPHP4-208ENST00000478423 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
NPHP4-208ENST00000478423 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.92
NPHP4-208ENST00000478423 ZANQ9Y493 2812 aa9.27□□□□□ -0.93
NPHP4-208ENST00000478423 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
NPHP4-208ENST00000478423 IGKV2D-30A0A075B6S6 120 aa9.27□□□□□ -0.93
NPHP4-208ENST00000478423 IGKV2-30P06310 120 aa9.27□□□□□ -0.93
NPHP4-208ENST00000478423 Q8N377 158 aa9.26□□□□□ -0.93
NPHP4-208ENST00000478423 A0A087WTM6 91 aa9.26□□□□□ -0.93
NPHP4-208ENST00000478423 WIPF1O43516 503 aa9.25□□□□□ -0.93
NPHP4-208ENST00000478423 APLNQ9ULZ1 77 aa9.25□□□□□ -0.93
NPHP4-208ENST00000478423 SPINK1P00995 79 aa9.24□□□□□ -0.93
NPHP4-208ENST00000478423 K7ERS5 55 aa9.24□□□□□ -0.93
NPHP4-208ENST00000478423 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
NPHP4-208ENST00000478423 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
NPHP4-208ENST00000478423 HIVEP1P15822 2718 aa9.22□□□□□ -0.93
NPHP4-208ENST00000478423 A0A1W2PNN7 141 aa9.22□□□□□ -0.93
NPHP4-208ENST00000478423 PSPHP1O15172 72 aa9.21□□□□□ -0.93
NPHP4-208ENST00000478423 IGFL1Q6UW32 110 aa9.21□□□□□ -0.93
NPHP4-208ENST00000478423 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.93
NPHP4-208ENST00000478423 K7EQZ3 153 aa9.21□□□□□ -0.94
NPHP4-208ENST00000478423 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
NPHP4-208ENST00000478423 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
NPHP4-208ENST00000478423 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
NPHP4-208ENST00000478423 TRAV22A0A0B4J277 110 aa9.19□□□□□ -0.94
NPHP4-208ENST00000478423 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
NPHP4-208ENST00000478423 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
NPHP4-208ENST00000478423 ZNF861PO60384 105 aa9.18□□□□□ -0.94
NPHP4-208ENST00000478423 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
NPHP4-208ENST00000478423 APCP25054 2843 aa9.16□□□□□ -0.94
NPHP4-208ENST00000478423 A8MWP4 228 aa9.16□□□□□ -0.94
NPHP4-208ENST00000478423 LINC00313P59037 77 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms