RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BCP62807 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST2H2BEQ16778 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.4□□□□□ -1.38
HDLBP-236ENST00000477477 GAGE2AQ6NT46 116 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BHQ93079 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BNQ99877 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BMQ99879 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HSBP1O75506 76 aa6.39□□□□□ -1.39
HDLBP-236ENST00000477477 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
HDLBP-236ENST00000477477 MOBPQ13875 183 aa6.39□□□□□ -1.39
HDLBP-236ENST00000477477 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
HDLBP-236ENST00000477477 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
HDLBP-236ENST00000477477 HIST1H2BLQ99880 126 aa6.39□□□□□ -1.39
HDLBP-236ENST00000477477 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
HDLBP-236ENST00000477477 LOC107984156A0A0G2JMH3 177 aa6.38□□□□□ -1.39
HDLBP-236ENST00000477477 TRBV10-2A0A0K0K1G8 114 aa6.38□□□□□ -1.39
HDLBP-236ENST00000477477 H0Y8G0 127 aa6.38□□□□□ -1.39
HDLBP-236ENST00000477477 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
HDLBP-236ENST00000477477 ARL17AQ8IVW1 177 aa6.38□□□□□ -1.39
HDLBP-236ENST00000477477 SNHG12Q9BXW3 62 aa6.38□□□□□ -1.39
HDLBP-236ENST00000477477 K7ERU9 68 aa6.37□□□□□ -1.39
HDLBP-236ENST00000477477 LEPROTO15243 131 aa6.37□□□□□ -1.39
HDLBP-236ENST00000477477 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
HDLBP-236ENST00000477477 Q9BRP9 147 aa6.37□□□□□ -1.39
HDLBP-236ENST00000477477 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
HDLBP-236ENST00000477477 Q6ZRX8 168 aa6.36□□□□□ -1.39
HDLBP-236ENST00000477477 Q8N377 158 aa6.36□□□□□ -1.39
HDLBP-236ENST00000477477 MIEN1Q9BRT3 115 aa6.36□□□□□ -1.39
HDLBP-236ENST00000477477 PRO1933Q9H354 126 aa6.36□□□□□ -1.39
HDLBP-236ENST00000477477 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
HDLBP-236ENST00000477477 J3QQQ9 107 aa6.35□□□□□ -1.39
HDLBP-236ENST00000477477 LEPROTL1O95214 131 aa6.35□□□□□ -1.39
HDLBP-236ENST00000477477 SCGB1A1P11684 91 aa6.35□□□□□ -1.39
HDLBP-236ENST00000477477 PLNP26678 52 aa6.35□□□□□ -1.39
HDLBP-236ENST00000477477 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
HDLBP-236ENST00000477477 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
HDLBP-236ENST00000477477 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
HDLBP-236ENST00000477477 LINC00310P59036 64 aa6.34□□□□□ -1.39
HDLBP-236ENST00000477477 MTURNQ8N3F0 131 aa6.34□□□□□ -1.39
HDLBP-236ENST00000477477 SLC25A20O43772 301 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 SERF1AO75920 110 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 DPM2O94777 84 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 NDUFC2O95298 119 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 NMUP48645 174 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 HERVK_113P61574 105 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
HDLBP-236ENST00000477477 TRAV23DV6A0A075B6W5 121 aa6.32□□□□□ -1.4
HDLBP-236ENST00000477477 TRGC2P03986 189 aa6.32□□□□□ -1.4
HDLBP-236ENST00000477477 LGALS3P17931 250 aaKnown RBP6.32□□□□□ -1.4
HDLBP-236ENST00000477477 LINC01547P58512 204 aaPredicted RBP6.32□□□□□ -1.4
HDLBP-236ENST00000477477 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
HDLBP-236ENST00000477477 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
HDLBP-236ENST00000477477 A0A1B0GV72 72 aa6.31□□□□□ -1.4
HDLBP-236ENST00000477477 XP32Q5T750 250 aa6.31□□□□□ -1.4
HDLBP-236ENST00000477477 C9orf153Q5TBE3 101 aa6.31□□□□□ -1.4
HDLBP-236ENST00000477477 SOSTDC1Q6X4U4 206 aa6.31□□□□□ -1.4
HDLBP-236ENST00000477477 PMCHL2Q9BQD1 86 aa6.31□□□□□ -1.4
HDLBP-236ENST00000477477 VPS25Q9BRG1 176 aa6.31□□□□□ -1.4
HDLBP-236ENST00000477477 ZNF73O43830 326 aaPredicted RBP6.3□□□□□ -1.4
HDLBP-236ENST00000477477 IGKCP01834 107 aa6.3□□□□□ -1.4
HDLBP-236ENST00000477477 VAMP8Q9BV40 100 aa6.3□□□□□ -1.4
HDLBP-236ENST00000477477 UQCR10Q9UDW1 63 aa6.3□□□□□ -1.4
HDLBP-236ENST00000477477 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
HDLBP-236ENST00000477477 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
HDLBP-236ENST00000477477 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
HDLBP-236ENST00000477477 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
HDLBP-236ENST00000477477 NPC2P61916 151 aa6.28□□□□□ -1.4
HDLBP-236ENST00000477477 ADAMTSL4-AS1Q5T5F5 129 aa6.28□□□□□ -1.4
HDLBP-236ENST00000477477 E9PLD3 99 aa6.26□□□□□ -1.41
HDLBP-236ENST00000477477 HINT1P49773 126 aaPredicted RBP6.26□□□□□ -1.41
HDLBP-236ENST00000477477 SPRR1BP22528 89 aa6.24□□□□□ -1.41
HDLBP-236ENST00000477477 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
HDLBP-236ENST00000477477 LITAFQ99732 161 aa6.24□□□□□ -1.41
HDLBP-236ENST00000477477 SPANXCQ9NY87 97 aa6.24□□□□□ -1.41
HDLBP-236ENST00000477477 OCIAD2Q56VL3 154 aa6.23□□□□□ -1.41
HDLBP-236ENST00000477477 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
HDLBP-236ENST00000477477 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
HDLBP-236ENST00000477477 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
HDLBP-236ENST00000477477 TIMM17BO60830 172 aa6.22□□□□□ -1.41
HDLBP-236ENST00000477477 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
HDLBP-236ENST00000477477 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
HDLBP-236ENST00000477477 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
HDLBP-236ENST00000477477 J3QR89 54 aa6.21□□□□□ -1.42
HDLBP-236ENST00000477477 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
HDLBP-236ENST00000477477 GTF2H5Q6ZYL4 71 aa6.21□□□□□ -1.42
HDLBP-236ENST00000477477 SPANXDQ9BXN6 97 aa6.21□□□□□ -1.42
HDLBP-236ENST00000477477 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
HDLBP-236ENST00000477477 ELOF1P60002 83 aaKnown RBP6.2□□□□□ -1.42
HDLBP-236ENST00000477477 LAMTOR3Q9UHA4 124 aa6.2□□□□□ -1.42
HDLBP-236ENST00000477477 COX7BP24311 80 aa6.19□□□□□ -1.42
HDLBP-236ENST00000477477 BATFQ16520 125 aa6.19□□□□□ -1.42
HDLBP-236ENST00000477477 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
HDLBP-236ENST00000477477 PCOTHQ58A44 107 aa6.19□□□□□ -1.42
HDLBP-236ENST00000477477 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
HDLBP-236ENST00000477477 ZNF815PA8K554 130 aa6.18□□□□□ -1.42
HDLBP-236ENST00000477477 VAMP3Q15836 100 aa6.18□□□□□ -1.42
HDLBP-236ENST00000477477 C6orf99Q4VX62 202 aa6.18□□□□□ -1.42
HDLBP-236ENST00000477477 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
HDLBP-236ENST00000477477 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms