RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 KRTAP4-16G5E9R7 235 aaPredicted RBP5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 PRYO14603 147 aa5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 SRSF9Q13242 221 aaKnown RBP eCLIP5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 TMEM126AQ9H061 195 aa5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 KCNQ1DNQ9H478 68 aa5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 UQCR10Q9UDW1 63 aa5.56□□□□□ -1.52
SPTAN1-207ENST00000476825 BCE1O60756 84 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 DDTP30046 118 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 TAL2Q16559 108 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 REG3GQ6UW15 175 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 HIST1H4GQ99525 98 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 C12orf57Q99622 126 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 PRO1933Q9H354 126 aa5.55□□□□□ -1.52
SPTAN1-207ENST00000476825 FAT3Q8TDW7 4589 aa5.54□□□□□ -1.52
SPTAN1-207ENST00000476825 LINC00518Q8N0U6 118 aa5.54□□□□□ -1.52
SPTAN1-207ENST00000476825 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
SPTAN1-207ENST00000476825 TRAV23DV6A0A075B6W5 121 aa5.53□□□□□ -1.52
SPTAN1-207ENST00000476825 HSD52Q0P140 79 aa5.53□□□□□ -1.52
SPTAN1-207ENST00000476825 S100A7L2Q5SY68 101 aa5.53□□□□□ -1.52
SPTAN1-207ENST00000476825 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
SPTAN1-207ENST00000476825 ZNF861PO60384 105 aa5.52□□□□□ -1.53
SPTAN1-207ENST00000476825 FXYD2P54710 66 aa5.52□□□□□ -1.53
SPTAN1-207ENST00000476825 PRLHP81277 87 aa5.52□□□□□ -1.53
SPTAN1-207ENST00000476825 SPINK6Q6UWN8 80 aa5.52□□□□□ -1.53
SPTAN1-207ENST00000476825 CEND1Q8N111 149 aa5.52□□□□□ -1.53
SPTAN1-207ENST00000476825 H0Y9J4 135 aa5.51□□□□□ -1.53
SPTAN1-207ENST00000476825 INAFM2P0DMQ5 153 aa5.51□□□□□ -1.53
SPTAN1-207ENST00000476825 FAM19A1Q7Z5A9 133 aa5.51□□□□□ -1.53
SPTAN1-207ENST00000476825 TRAV13-2A0A0B4J235 113 aa5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 A0A0B4J2C4 111 aa5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 B5MCH6 92 aa5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 CFC1BP0CG36 223 aa5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 CFC1P0CG37 223 aa5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 OR13C6PQ8NH95 151 aa5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
SPTAN1-207ENST00000476825 A6NDN8 102 aa5.49□□□□□ -1.53
SPTAN1-207ENST00000476825 RPL28P46779 137 aaKnown RBP5.49□□□□□ -1.53
SPTAN1-207ENST00000476825 Q6ZRX8 168 aa5.49□□□□□ -1.53
SPTAN1-207ENST00000476825 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
SPTAN1-207ENST00000476825 MYCBP2O75592 4640 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 ETDCA0A1B0GVM5 59 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 A0A1B0GWB2 263 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 TSTD3H0UI37 97 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 RPL13AP40429 203 aaKnown RBP5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 UBE2AP49459 152 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 SMIM11BQ8TCY0 68 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 SMCR5Q8TEV8 140 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 Q9BRP9 147 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 CBY1Q9Y3M2 126 aa5.48□□□□□ -1.53
SPTAN1-207ENST00000476825 ELOF1P60002 83 aaKnown RBP5.47□□□□□ -1.53
SPTAN1-207ENST00000476825 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
SPTAN1-207ENST00000476825 CTAG1AP78358 180 aa5.46□□□□□ -1.54
SPTAN1-207ENST00000476825 BVES-AS1Q5T3Y7 98 aa5.46□□□□□ -1.54
SPTAN1-207ENST00000476825 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.54
SPTAN1-207ENST00000476825 TNXBP22105 4242 aa5.45□□□□□ -1.54
SPTAN1-207ENST00000476825 K7ERJ3 54 aa5.45□□□□□ -1.54
SPTAN1-207ENST00000476825 ERC2-IT1O76042 136 aa5.45□□□□□ -1.54
SPTAN1-207ENST00000476825 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
SPTAN1-207ENST00000476825 NHP2Q9NX24 153 aaKnown RBP5.45□□□□□ -1.54
SPTAN1-207ENST00000476825 KRTAP29-1A8MX34 341 aaPredicted RBP5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 COX7BP24311 80 aa5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 RAB37Q96AX2 223 aa5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 PRO1854Q9UHT4 67 aa5.44□□□□□ -1.54
SPTAN1-207ENST00000476825 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
SPTAN1-207ENST00000476825 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
SPTAN1-207ENST00000476825 LINC01600Q96MT4 127 aa5.43□□□□□ -1.54
SPTAN1-207ENST00000476825 SPRR4Q96PI1 79 aa5.43□□□□□ -1.54
SPTAN1-207ENST00000476825 M0R143 59 aa5.42□□□□□ -1.54
SPTAN1-207ENST00000476825 OXTP01178 125 aa5.42□□□□□ -1.54
SPTAN1-207ENST00000476825 A0A087X002 238 aa5.41□□□□□ -1.54
SPTAN1-207ENST00000476825 H7C2G1 150 aa5.41□□□□□ -1.54
SPTAN1-207ENST00000476825 TSPAN13O95857 204 aa5.41□□□□□ -1.54
SPTAN1-207ENST00000476825 DHRS4-AS1Q9P1J3 65 aa5.41□□□□□ -1.54
SPTAN1-207ENST00000476825 LINC00483Q53H64 154 aa5.4□□□□□ -1.54
SPTAN1-207ENST00000476825 ST20-AS1Q8NBB2 130 aa5.4□□□□□ -1.54
SPTAN1-207ENST00000476825 TRIAP1O43715 76 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 KRTAP10-8P60410 259 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 FAM229BQ4G0N7 80 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 LINC00575Q6W349 94 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 FAM218AQ96MZ4 157 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
SPTAN1-207ENST00000476825 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
SPTAN1-207ENST00000476825 SPRR1BP22528 89 aa5.38□□□□□ -1.55
SPTAN1-207ENST00000476825 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
SPTAN1-207ENST00000476825 Q1RN00 199 aa5.38□□□□□ -1.55
SPTAN1-207ENST00000476825 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
SPTAN1-207ENST00000476825 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
SPTAN1-207ENST00000476825 HERC1Q15751 4861 aa5.37□□□□□ -1.55
SPTAN1-207ENST00000476825 VAMP3Q15836 100 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms