RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FSHBP01225 129 aa9.03□□□□□ -0.96
HDAC1-206ENST00000476391 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
HDAC1-206ENST00000476391 CDC42SE1Q9NRR8 79 aa9.03□□□□□ -0.96
HDAC1-206ENST00000476391 H3BPC8 53 aa9.03□□□□□ -0.96
HDAC1-206ENST00000476391 TNP2Q05952 138 aa9.03□□□□□ -0.96
HDAC1-206ENST00000476391 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
HDAC1-206ENST00000476391 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
HDAC1-206ENST00000476391 C11orf45Q8TAV5 145 aa8.99□□□□□ -0.97
HDAC1-206ENST00000476391 TLN2Q9Y4G6 2542 aa8.98□□□□□ -0.97
HDAC1-206ENST00000476391 PKD1L2Q7Z442 2459 aa8.98□□□□□ -0.97
HDAC1-206ENST00000476391 CAMK2N2Q96S95 79 aa8.98□□□□□ -0.97
HDAC1-206ENST00000476391 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
HDAC1-206ENST00000476391 EPG5Q9HCE0 2579 aa8.97□□□□□ -0.97
HDAC1-206ENST00000476391 IGLV1-51P01701 117 aa8.96□□□□□ -0.98
HDAC1-206ENST00000476391 LELP1Q5T871 98 aa8.95□□□□□ -0.98
HDAC1-206ENST00000476391 CHD6Q8TD26 2715 aa8.95□□□□□ -0.98
HDAC1-206ENST00000476391 USP24Q9UPU5 2620 aa8.95□□□□□ -0.98
HDAC1-206ENST00000476391 JMJD1CQ15652 2540 aa8.95□□□□□ -0.98
HDAC1-206ENST00000476391 ZFYVE26Q68DK2 2539 aa8.94□□□□□ -0.98
HDAC1-206ENST00000476391 IGKV2D-24A0A075B6R9 120 aa8.94□□□□□ -0.98
HDAC1-206ENST00000476391 AKAP9Q99996 3911 aa8.94□□□□□ -0.98
HDAC1-206ENST00000476391 CUBNO60494 3623 aa8.94□□□□□ -0.98
HDAC1-206ENST00000476391 C8orf87E5RJ46 101 aa8.93□□□□□ -0.98
HDAC1-206ENST00000476391 H0Y9P7 68 aa8.93□□□□□ -0.98
HDAC1-206ENST00000476391 MOBPQ13875 183 aa8.93□□□□□ -0.98
HDAC1-206ENST00000476391 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
HDAC1-206ENST00000476391 X6R8D5 127 aa8.93□□□□□ -0.98
HDAC1-206ENST00000476391 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
HDAC1-206ENST00000476391 Q6ZRX8 168 aa8.92□□□□□ -0.98
HDAC1-206ENST00000476391 COA5Q86WW8 74 aa8.92□□□□□ -0.98
HDAC1-206ENST00000476391 MYO9AB2RTY4 2548 aa8.92□□□□□ -0.98
HDAC1-206ENST00000476391 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
HDAC1-206ENST00000476391 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
HDAC1-206ENST00000476391 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
HDAC1-206ENST00000476391 IGSF10Q6WRI0 2623 aa8.9□□□□□ -0.99
HDAC1-206ENST00000476391 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.99
HDAC1-206ENST00000476391 NKAPP1Q8N9T2 125 aa8.9□□□□□ -0.99
HDAC1-206ENST00000476391 C7orf33Q8WU49 177 aa8.9□□□□□ -0.99
HDAC1-206ENST00000476391 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
HDAC1-206ENST00000476391 DEFB116Q30KQ4 102 aa8.89□□□□□ -0.99
HDAC1-206ENST00000476391 MAPK1IP1LQ8NDC0 245 aa8.89□□□□□ -0.99
HDAC1-206ENST00000476391 WFDC10BQ8IUB3 73 aa8.88□□□□□ -0.99
HDAC1-206ENST00000476391 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
HDAC1-206ENST00000476391 APCP25054 2843 aa8.88□□□□□ -0.99
HDAC1-206ENST00000476391 FN1P02751 2386 aaKnown RBP8.87□□□□□ -0.99
HDAC1-206ENST00000476391 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
HDAC1-206ENST00000476391 KRTAP4-16G5E9R7 235 aaPredicted RBP8.87□□□□□ -0.99
HDAC1-206ENST00000476391 CFAP46Q8IYW2 2715 aa8.87□□□□□ -0.99
HDAC1-206ENST00000476391 PTPN13Q12923 2485 aa8.86□□□□□ -0.99
HDAC1-206ENST00000476391 SPRR1AP35321 89 aa8.84□□□□□ -0.99
HDAC1-206ENST00000476391 C15orf56Q8N910 161 aa8.83□□□□□ -1
HDAC1-206ENST00000476391 CASC2Q6XLA1 102 aa8.83□□□□□ -1
HDAC1-206ENST00000476391 SERTAD4-AS1Q5TG53 156 aa8.82□□□□□ -1
HDAC1-206ENST00000476391 KRTAP26-1Q6PEX3 210 aa8.82□□□□□ -1
HDAC1-206ENST00000476391 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
HDAC1-206ENST00000476391 ZANQ9Y493 2812 aa8.81□□□□□ -1
HDAC1-206ENST00000476391 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
HDAC1-206ENST00000476391 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
HDAC1-206ENST00000476391 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
HDAC1-206ENST00000476391 USP9YO00507 2555 aaPredicted RBP8.8□□□□□ -1
HDAC1-206ENST00000476391 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
HDAC1-206ENST00000476391 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
HDAC1-206ENST00000476391 IGFL1Q6UW32 110 aa8.78□□□□□ -1
HDAC1-206ENST00000476391 SPINK7P58062 85 aa8.77□□□□□ -1.01
HDAC1-206ENST00000476391 A0A087WSZ3 146 aa8.76□□□□□ -1.01
HDAC1-206ENST00000476391 DEFB4AO15263 64 aa8.76□□□□□ -1.01
HDAC1-206ENST00000476391 USP9XQ93008 2570 aaPredicted RBP8.76□□□□□ -1.01
HDAC1-206ENST00000476391 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
HDAC1-206ENST00000476391 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
HDAC1-206ENST00000476391 LINC00313P59037 77 aa8.76□□□□□ -1.01
HDAC1-206ENST00000476391 FBN2P35556 2912 aa8.75□□□□□ -1.01
HDAC1-206ENST00000476391 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
HDAC1-206ENST00000476391 UTP20O75691 2785 aaKnown RBP8.74□□□□□ -1.01
HDAC1-206ENST00000476391 TLX1NBP0CAT3 122 aa8.74□□□□□ -1.01
HDAC1-206ENST00000476391 FLNCQ14315 2725 aa8.74□□□□□ -1.01
HDAC1-206ENST00000476391 ZNF462Q96JM2 2506 aa8.73□□□□□ -1.01
HDAC1-206ENST00000476391 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
HDAC1-206ENST00000476391 A8MWP4 228 aa8.73□□□□□ -1.01
HDAC1-206ENST00000476391 H3BS24 57 aa8.73□□□□□ -1.01
HDAC1-206ENST00000476391 HTN3P15516 51 aa8.73□□□□□ -1.01
HDAC1-206ENST00000476391 NBEAL2Q6ZNJ1 2754 aa8.72□□□□□ -1.01
HDAC1-206ENST00000476391 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.014e-7■■■■■ 50.1
HDAC1-206ENST00000476391 KMT2BQ9UMN6 2715 aaPredicted RBP8.72□□□□□ -1.01
HDAC1-206ENST00000476391 ANKRD17O75179 2603 aaKnown RBP8.72□□□□□ -1.01
HDAC1-206ENST00000476391 DEFB135Q30KP9 77 aa8.71□□□□□ -1.01
HDAC1-206ENST00000476391 LINC01554Q52M75 96 aa8.71□□□□□ -1.01
HDAC1-206ENST00000476391 MYO18BQ8IUG5 2567 aa8.71□□□□□ -1.02
HDAC1-206ENST00000476391 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.02
HDAC1-206ENST00000476391 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
HDAC1-206ENST00000476391 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
HDAC1-206ENST00000476391 ASB16-AS1Q495Z4 193 aa8.7□□□□□ -1.02
HDAC1-206ENST00000476391 GCN1Q92616 2671 aaKnown RBP8.7□□□□□ -1.02
HDAC1-206ENST00000476391 PLA2G1BP04054 148 aaKnown RBP8.7□□□□□ -1.02
HDAC1-206ENST00000476391 Q8NAQ8 132 aa8.69□□□□□ -1.02
HDAC1-206ENST00000476391 PRAC1Q96KF2 57 aa8.67□□□□□ -1.02
HDAC1-206ENST00000476391 PCOTHQ58A44 107 aa8.66□□□□□ -1.02
HDAC1-206ENST00000476391 FAM208BQ5VWN6 2430 aa8.66□□□□□ -1.02
HDAC1-206ENST00000476391 TEX15Q9BXT5 2789 aa8.66□□□□□ -1.02
HDAC1-206ENST00000476391 A0A087X002 238 aa8.66□□□□□ -1.02
HDAC1-206ENST00000476391 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms