RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SPANXCQ9NY87 97 aa9.46□□□□□ -0.9
COL1A1-205ENST00000476387 B5MCH6 92 aa9.45□□□□□ -0.9
COL1A1-205ENST00000476387 S100A2P29034 98 aa9.45□□□□□ -0.9
COL1A1-205ENST00000476387 SCGB1D4Q6XE38 83 aa9.45□□□□□ -0.9
COL1A1-205ENST00000476387 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
COL1A1-205ENST00000476387 CBY1Q9Y3M2 126 aa9.45□□□□□ -0.9
COL1A1-205ENST00000476387 ANKRD39Q53RE8 183 aa9.43□□□□□ -0.9
COL1A1-205ENST00000476387 Q6ZRX8 168 aa9.43□□□□□ -0.9
COL1A1-205ENST00000476387 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
COL1A1-205ENST00000476387 S100A6P06703 90 aa9.42□□□□□ -0.9
COL1A1-205ENST00000476387 OR13C6PQ8NH95 151 aa9.42□□□□□ -0.9
COL1A1-205ENST00000476387 ZNF73O43830 326 aaPredicted RBP9.41□□□□□ -0.9
COL1A1-205ENST00000476387 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
COL1A1-205ENST00000476387 HIST3H2BBQ8N257 126 aa9.41□□□□□ -0.9
COL1A1-205ENST00000476387 PPDPFQ9H3Y8 114 aa9.41□□□□□ -0.9
COL1A1-205ENST00000476387 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
COL1A1-205ENST00000476387 CTAG1AP78358 180 aa9.4□□□□□ -0.9
COL1A1-205ENST00000476387 COPS9Q8WXC6 57 aa9.4□□□□□ -0.9
COL1A1-205ENST00000476387 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.9
COL1A1-205ENST00000476387 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.9
COL1A1-205ENST00000476387 MUC2Q02817 5179 aa9.4□□□□□ -0.91
COL1A1-205ENST00000476387 SNRPEP62304 92 aaKnown RBP9.39□□□□□ -0.91
COL1A1-205ENST00000476387 GAGE2AQ6NT46 116 aa9.39□□□□□ -0.91
COL1A1-205ENST00000476387 Q9BRP9 147 aa9.39□□□□□ -0.91
COL1A1-205ENST00000476387 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
COL1A1-205ENST00000476387 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
COL1A1-205ENST00000476387 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
COL1A1-205ENST00000476387 PCP2Q8IVA1 136 aa9.37□□□□□ -0.91
COL1A1-205ENST00000476387 SPAG11AQ6PDA7 123 aa9.36□□□□□ -0.91
COL1A1-205ENST00000476387 HSBP1L1C9JCN9 74 aa9.35□□□□□ -0.91
COL1A1-205ENST00000476387 IFITM1P13164 125 aa9.35□□□□□ -0.91
COL1A1-205ENST00000476387 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
COL1A1-205ENST00000476387 Q6ZVH6 145 aa9.35□□□□□ -0.91
COL1A1-205ENST00000476387 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
COL1A1-205ENST00000476387 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
COL1A1-205ENST00000476387 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
COL1A1-205ENST00000476387 Q8NBF4 154 aa9.33□□□□□ -0.92
COL1A1-205ENST00000476387 MOBPQ13875 183 aa9.31□□□□□ -0.92
COL1A1-205ENST00000476387 DHRS4-AS1Q9P1J3 65 aa9.31□□□□□ -0.92
COL1A1-205ENST00000476387 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
COL1A1-205ENST00000476387 A6NDN8 102 aa9.29□□□□□ -0.92
COL1A1-205ENST00000476387 C5orf52A6NGY3 159 aa9.29□□□□□ -0.92
COL1A1-205ENST00000476387 COX7BP24311 80 aa9.29□□□□□ -0.92
COL1A1-205ENST00000476387 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
COL1A1-205ENST00000476387 C6orf99Q4VX62 202 aa9.29□□□□□ -0.92
COL1A1-205ENST00000476387 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
COL1A1-205ENST00000476387 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
COL1A1-205ENST00000476387 C9orf153Q5TBE3 101 aa9.28□□□□□ -0.92
COL1A1-205ENST00000476387 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
COL1A1-205ENST00000476387 IGLV7-46A0A075B6I9 117 aa9.27□□□□□ -0.93
COL1A1-205ENST00000476387 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
COL1A1-205ENST00000476387 SPINK1P00995 79 aa9.26□□□□□ -0.93
COL1A1-205ENST00000476387 TRAV13-2A0A0B4J235 113 aa9.25□□□□□ -0.93
COL1A1-205ENST00000476387 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
COL1A1-205ENST00000476387 CDIP1Q9H305 208 aa9.25□□□□□ -0.93
COL1A1-205ENST00000476387 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
COL1A1-205ENST00000476387 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
COL1A1-205ENST00000476387 SPRR1BP22528 89 aa9.21□□□□□ -0.94
COL1A1-205ENST00000476387 FP248Q71RG6 208 aaPredicted RBP9.21□□□□□ -0.94
COL1A1-205ENST00000476387 RPS29P62273 56 aaKnown RBP9.2□□□□□ -0.94
COL1A1-205ENST00000476387 TAL2Q16559 108 aa9.2□□□□□ -0.94
COL1A1-205ENST00000476387 LAMTOR3Q9UHA4 124 aa9.2□□□□□ -0.94
COL1A1-205ENST00000476387 A4D1N5 150 aa9.19□□□□□ -0.94
COL1A1-205ENST00000476387 DEFB105AQ8NG35 78 aa9.18□□□□□ -0.94
COL1A1-205ENST00000476387 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
COL1A1-205ENST00000476387 NHP2Q9NX24 153 aaKnown RBP9.18□□□□□ -0.94
COL1A1-205ENST00000476387 COX8AP10176 69 aa9.17□□□□□ -0.94
COL1A1-205ENST00000476387 HIST1H4GQ99525 98 aa9.17□□□□□ -0.94
COL1A1-205ENST00000476387 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
COL1A1-205ENST00000476387 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
COL1A1-205ENST00000476387 SLC25A20O43772 301 aa9.15□□□□□ -0.94
COL1A1-205ENST00000476387 VAMP3Q15836 100 aa9.15□□□□□ -0.94
COL1A1-205ENST00000476387 Q1RN00 199 aa9.15□□□□□ -0.94
COL1A1-205ENST00000476387 Q8N377 158 aa9.15□□□□□ -0.94
COL1A1-205ENST00000476387 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
COL1A1-205ENST00000476387 MUC17Q685J3 4493 aa9.13□□□□□ -0.95
COL1A1-205ENST00000476387 DLEU1O43261 78 aa9.13□□□□□ -0.95
COL1A1-205ENST00000476387 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
COL1A1-205ENST00000476387 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
COL1A1-205ENST00000476387 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
COL1A1-205ENST00000476387 IGLV5-48A0A075B6I7 105 aa9.11□□□□□ -0.95
COL1A1-205ENST00000476387 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
COL1A1-205ENST00000476387 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
COL1A1-205ENST00000476387 C12orf57Q99622 126 aa9.11□□□□□ -0.95
COL1A1-205ENST00000476387 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
COL1A1-205ENST00000476387 HRCT1Q6UXD1 115 aa9.1□□□□□ -0.95
COL1A1-205ENST00000476387 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
COL1A1-205ENST00000476387 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
COL1A1-205ENST00000476387 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
COL1A1-205ENST00000476387 HIGD1BQ9P298 99 aa9.07□□□□□ -0.96
COL1A1-205ENST00000476387 LINC00575Q6W349 94 aa9.06□□□□□ -0.96
COL1A1-205ENST00000476387 hADV29S1A0JD25 119 aa9.05□□□□□ -0.96
COL1A1-205ENST00000476387 H7C2G1 150 aa9.05□□□□□ -0.96
COL1A1-205ENST00000476387 CD164Q04900 197 aa9.05□□□□□ -0.96
COL1A1-205ENST00000476387 ASB16-AS1Q495Z4 193 aa9.05□□□□□ -0.96
COL1A1-205ENST00000476387 BVES-AS1Q5T3Y7 98 aa9.05□□□□□ -0.96
COL1A1-205ENST00000476387 F8WEM9 126 aa9.04□□□□□ -0.96
COL1A1-205ENST00000476387 Q6ZQY7 126 aa9.04□□□□□ -0.96
COL1A1-205ENST00000476387 RAB37Q96AX2 223 aa9.04□□□□□ -0.96
COL1A1-205ENST00000476387 KRTAP9-2Q9BYQ4 174 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms