RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
TVP23B-202ENST00000476139 CSMD3Q7Z407 3707 aa10.81□□□□□ -0.68
TVP23B-202ENST00000476139 F8WDY8 70 aa10.8□□□□□ -0.68
TVP23B-202ENST00000476139 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
TVP23B-202ENST00000476139 SCXQ7RTU7 201 aa10.79□□□□□ -0.68
TVP23B-202ENST00000476139 DNAH7Q8WXX0 4024 aa10.79□□□□□ -0.68
TVP23B-202ENST00000476139 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
TVP23B-202ENST00000476139 SERP2Q8N6R1 65 aa10.78□□□□□ -0.68
TVP23B-202ENST00000476139 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
TVP23B-202ENST00000476139 C7orf33Q8WU49 177 aa10.78□□□□□ -0.68
TVP23B-202ENST00000476139 KRTAP1-5Q9BYS1 174 aa10.78□□□□□ -0.68
TVP23B-202ENST00000476139 GHRHP01286 108 aa10.78□□□□□ -0.68
TVP23B-202ENST00000476139 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.68
TVP23B-202ENST00000476139 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.68
TVP23B-202ENST00000476139 Q6ZVQ6 151 aa10.77□□□□□ -0.68
TVP23B-202ENST00000476139 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.69
TVP23B-202ENST00000476139 TRBV7-6A0A0J9YX20 115 aa10.76□□□□□ -0.69
TVP23B-202ENST00000476139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.76□□□□□ -0.69
TVP23B-202ENST00000476139 TLX1NBP0CAT3 122 aa10.76□□□□□ -0.69
TVP23B-202ENST00000476139 LINC01547P58512 204 aaPredicted RBP10.76□□□□□ -0.69
TVP23B-202ENST00000476139 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
TVP23B-202ENST00000476139 CRYGAP11844 174 aa10.75□□□□□ -0.69
TVP23B-202ENST00000476139 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
TVP23B-202ENST00000476139 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
TVP23B-202ENST00000476139 RMI2Q96E14 147 aa10.74□□□□□ -0.69
TVP23B-202ENST00000476139 ATP5EP2Q5VTU8 51 aa10.73□□□□□ -0.69
TVP23B-202ENST00000476139 TRBV7-4A0A0J9YYF1 115 aa10.7□□□□□ -0.7
TVP23B-202ENST00000476139 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
TVP23B-202ENST00000476139 APLNQ9ULZ1 77 aa10.69□□□□□ -0.7
TVP23B-202ENST00000476139 PLA2G2DQ9UNK4 145 aa10.68□□□□□ -0.7
TVP23B-202ENST00000476139 IGLV1-50A0A075B6I6 118 aa10.68□□□□□ -0.7
TVP23B-202ENST00000476139 UBE2DNLQ8IWF7 75 aa10.68□□□□□ -0.7
TVP23B-202ENST00000476139 H3BQ85 93 aa10.67□□□□□ -0.7
TVP23B-202ENST00000476139 C20orf197Q8N268 126 aa10.67□□□□□ -0.7
TVP23B-202ENST00000476139 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
TVP23B-202ENST00000476139 Q8N9L7 120 aa10.67□□□□□ -0.7
TVP23B-202ENST00000476139 PDE6GP18545 87 aa10.66□□□□□ -0.7
TVP23B-202ENST00000476139 B9D2Q9BPU9 175 aa10.66□□□□□ -0.7
TVP23B-202ENST00000476139 KRTAP4-16G5E9R7 235 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-202ENST00000476139 C3orf84H3BNL1 204 aa10.65□□□□□ -0.7
TVP23B-202ENST00000476139 PSCAO43653 123 aa10.65□□□□□ -0.7
TVP23B-202ENST00000476139 Q9BRP9 147 aa10.65□□□□□ -0.7
TVP23B-202ENST00000476139 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.71
TVP23B-202ENST00000476139 Q6ZRX8 168 aa10.64□□□□□ -0.71
TVP23B-202ENST00000476139 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
TVP23B-202ENST00000476139 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.63□□□□□ -0.71
TVP23B-202ENST00000476139 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
TVP23B-202ENST00000476139 Q8N377 158 aa10.63□□□□□ -0.71
TVP23B-202ENST00000476139 A0A096LNI7 61 aa10.62□□□□□ -0.71
TVP23B-202ENST00000476139 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
TVP23B-202ENST00000476139 SPRR1AP35321 89 aa10.61□□□□□ -0.71
TVP23B-202ENST00000476139 DYNC2H1Q8NCM8 4307 aaKnown RBP10.61□□□□□ -0.71
TVP23B-202ENST00000476139 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
TVP23B-202ENST00000476139 ETDCA0A1B0GVM5 59 aa10.6□□□□□ -0.71
TVP23B-202ENST00000476139 PRYO14603 147 aa10.59□□□□□ -0.71
TVP23B-202ENST00000476139 ERC2-IT1O76042 136 aa10.59□□□□□ -0.71
TVP23B-202ENST00000476139 A0A1W2PNN7 141 aa10.59□□□□□ -0.71
TVP23B-202ENST00000476139 SNURFQ9Y675 71 aa10.59□□□□□ -0.71
TVP23B-202ENST00000476139 CXCL6P80162 114 aa10.58□□□□□ -0.72
TVP23B-202ENST00000476139 DHRS4-AS1Q9P1J3 65 aa10.57□□□□□ -0.72
TVP23B-202ENST00000476139 STARD9Q9P2P6 4700 aa10.56□□□□□ -0.72
TVP23B-202ENST00000476139 CNBPP62633 177 aaKnown RBP10.56□□□□□ -0.72
TVP23B-202ENST00000476139 NREPQ16612 68 aa10.56□□□□□ -0.72
TVP23B-202ENST00000476139 DPH3Q96FX2 82 aa10.56□□□□□ -0.72
TVP23B-202ENST00000476139 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
TVP23B-202ENST00000476139 BPY2O14599 106 aa10.56□□□□□ -0.72
TVP23B-202ENST00000476139 TMEM258P61165 79 aa10.56□□□□□ -0.72
TVP23B-202ENST00000476139 J3KT08 172 aa10.55□□□□□ -0.72
TVP23B-202ENST00000476139 MEGF8Q7Z7M0 2845 aa10.55□□□□□ -0.72
TVP23B-202ENST00000476139 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
TVP23B-202ENST00000476139 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
TVP23B-202ENST00000476139 UBE2BP63146 152 aa10.54□□□□□ -0.72
TVP23B-202ENST00000476139 REG3GQ6UW15 175 aa10.54□□□□□ -0.72
TVP23B-202ENST00000476139 DNHD1Q96M86 4753 aa10.54□□□□□ -0.72
TVP23B-202ENST00000476139 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
TVP23B-202ENST00000476139 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
TVP23B-202ENST00000476139 OXTP01178 125 aa10.53□□□□□ -0.72
TVP23B-202ENST00000476139 IGLV5-48A0A075B6I7 105 aa10.51□□□□□ -0.73
TVP23B-202ENST00000476139 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
TVP23B-202ENST00000476139 LRCOL1A6NCL2 159 aa10.5□□□□□ -0.73
TVP23B-202ENST00000476139 PRLHP81277 87 aa10.5□□□□□ -0.73
TVP23B-202ENST00000476139 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
TVP23B-202ENST00000476139 A0A1W2PNM2 257 aa10.49□□□□□ -0.73
TVP23B-202ENST00000476139 NUPR2A6NF83 97 aa10.49□□□□□ -0.73
TVP23B-202ENST00000476139 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
TVP23B-202ENST00000476139 IGKV4-1P06312 121 aa10.47□□□□□ -0.73
TVP23B-202ENST00000476139 PHF5AQ7RTV0 110 aaKnown RBP10.47□□□□□ -0.73
TVP23B-202ENST00000476139 TNP2Q05952 138 aa10.46□□□□□ -0.73
TVP23B-202ENST00000476139 KMT2AQ03164 3969 aa10.46□□□□□ -0.74
TVP23B-202ENST00000476139 H7BZZ5 65 aa10.46□□□□□ -0.74
TVP23B-202ENST00000476139 C14orf177Q52M58 125 aa10.46□□□□□ -0.74
TVP23B-202ENST00000476139 Q6ZRN7 208 aaPredicted RBP10.46□□□□□ -0.74
TVP23B-202ENST00000476139 FUSP35637 526 aaKnown RBP eCLIP10.45□□□□□ -0.74
TVP23B-202ENST00000476139 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
TVP23B-202ENST00000476139 PANO1I0J062 215 aa10.44□□□□□ -0.74
TVP23B-202ENST00000476139 RPS28P62857 69 aaKnown RBP10.44□□□□□ -0.74
TVP23B-202ENST00000476139 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
TVP23B-202ENST00000476139 HIGD2AQ9BW72 106 aa10.44□□□□□ -0.74
TVP23B-202ENST00000476139 F8WEM9 126 aa10.43□□□□□ -0.74
TVP23B-202ENST00000476139 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms