RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 ETDCA0A1B0GVM5 59 aa12.71□□□□□ -0.37
NPM3-204ENST00000474993 BCE1O60756 84 aa12.71□□□□□ -0.37
NPM3-204ENST00000474993 BATFQ16520 125 aa12.71□□□□□ -0.37
NPM3-204ENST00000474993 DIRC1Q969H9 104 aa12.71□□□□□ -0.37
NPM3-204ENST00000474993 SPRR1AP35321 89 aa12.7□□□□□ -0.38
NPM3-204ENST00000474993 Q1RN00 199 aa12.7□□□□□ -0.38
NPM3-204ENST00000474993 H7C2G1 150 aa12.69□□□□□ -0.38
NPM3-204ENST00000474993 VAMP3Q15836 100 aa12.69□□□□□ -0.38
NPM3-204ENST00000474993 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
NPM3-204ENST00000474993 TRBV7-6A0A0J9YX20 115 aa12.67□□□□□ -0.38
NPM3-204ENST00000474993 K7ERJ3 54 aa12.67□□□□□ -0.38
NPM3-204ENST00000474993 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
NPM3-204ENST00000474993 UBE2AP49459 152 aa12.67□□□□□ -0.38
NPM3-204ENST00000474993 FAM19A1Q7Z5A9 133 aa12.67□□□□□ -0.38
NPM3-204ENST00000474993 C6orf99Q4VX62 202 aa12.66□□□□□ -0.38
NPM3-204ENST00000474993 Q8N1X5 172 aa12.66□□□□□ -0.38
NPM3-204ENST00000474993 APOBP04114 4563 aaKnown RBP12.66□□□□□ -0.38
NPM3-204ENST00000474993 IGLV7-43P04211 117 aa12.65□□□□□ -0.38
NPM3-204ENST00000474993 H0Y9J4 135 aa12.64□□□□□ -0.39
NPM3-204ENST00000474993 KRTAP4-16G5E9R7 235 aaPredicted RBP12.63□□□□□ -0.39
NPM3-204ENST00000474993 COX7BP24311 80 aa12.63□□□□□ -0.39
NPM3-204ENST00000474993 Q5VSD8 79 aa12.63□□□□□ -0.39
NPM3-204ENST00000474993 B5MCH6 92 aa12.62□□□□□ -0.39
NPM3-204ENST00000474993 ZNF861PO60384 105 aa12.61□□□□□ -0.39
NPM3-204ENST00000474993 COX6CP09669 75 aa12.61□□□□□ -0.39
NPM3-204ENST00000474993 PSMB2P49721 201 aa12.61□□□□□ -0.39
NPM3-204ENST00000474993 Q6ZRX8 168 aa12.61□□□□□ -0.39
NPM3-204ENST00000474993 ELOF1P60002 83 aaKnown RBP12.6□□□□□ -0.39
NPM3-204ENST00000474993 SNHG12Q9BXW3 62 aa12.6□□□□□ -0.39
NPM3-204ENST00000474993 PCLOQ9Y6V0 5065 aa12.59□□□□□ -0.39
NPM3-204ENST00000474993 H0YGX0 51 aa12.59□□□□□ -0.39
NPM3-204ENST00000474993 TSPAN13O95857 204 aa12.59□□□□□ -0.39
NPM3-204ENST00000474993 RYR1P21817 5038 aa12.59□□□□□ -0.39
NPM3-204ENST00000474993 INAFM2P0DMQ5 153 aa12.58□□□□□ -0.4
NPM3-204ENST00000474993 PRLHP81277 87 aa12.58□□□□□ -0.4
NPM3-204ENST00000474993 DHRS4-AS1Q9P1J3 65 aa12.58□□□□□ -0.4
NPM3-204ENST00000474993 SNCGO76070 127 aa12.57□□□□□ -0.4
NPM3-204ENST00000474993 COL5A1-AS1Q5SY13 56 aa12.57□□□□□ -0.4
NPM3-204ENST00000474993 KRTAP13-1Q8IUC0 172 aa12.57□□□□□ -0.4
NPM3-204ENST00000474993 SLC25A20O43772 301 aa12.56□□□□□ -0.4
NPM3-204ENST00000474993 SPINK6Q6UWN8 80 aa12.56□□□□□ -0.4
NPM3-204ENST00000474993 HIGD2AQ9BW72 106 aa12.55□□□□□ -0.4
NPM3-204ENST00000474993 TRIAP1O43715 76 aa12.54□□□□□ -0.4
NPM3-204ENST00000474993 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
NPM3-204ENST00000474993 KIAA1109Q2LD37 5005 aa12.54□□□□□ -0.4
NPM3-204ENST00000474993 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
NPM3-204ENST00000474993 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.41
NPM3-204ENST00000474993 LINC00575Q6W349 94 aa12.5□□□□□ -0.41
NPM3-204ENST00000474993 SMCR5Q8TEV8 140 aa12.5□□□□□ -0.41
NPM3-204ENST00000474993 Q9BRP9 147 aa12.5□□□□□ -0.41
NPM3-204ENST00000474993 HSPG2P98160 4391 aa12.49□□□□□ -0.41
NPM3-204ENST00000474993 C9orf118A6NHY6 69 aa12.49□□□□□ -0.41
NPM3-204ENST00000474993 ZNF706Q9Y5V0 76 aaPredicted RBP12.49□□□□□ -0.41
NPM3-204ENST00000474993 A0A1B0GX51 115 aa12.48□□□□□ -0.41
NPM3-204ENST00000474993 hADV29S1A0JD25 119 aa12.48□□□□□ -0.41
NPM3-204ENST00000474993 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
NPM3-204ENST00000474993 H3BUT2 72 aa12.46□□□□□ -0.41
NPM3-204ENST00000474993 HERC2O95714 4834 aa12.46□□□□□ -0.42
NPM3-204ENST00000474993 NAA38Q9BRA0 125 aaKnown RBP12.44□□□□□ -0.42
NPM3-204ENST00000474993 ERC2-IT1O76042 136 aa12.42□□□□□ -0.42
NPM3-204ENST00000474993 GHRHP01286 108 aa12.41□□□□□ -0.42
NPM3-204ENST00000474993 FABP2P12104 132 aa12.41□□□□□ -0.42
NPM3-204ENST00000474993 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.41□□□□□ -0.42
NPM3-204ENST00000474993 CLEC2BQ92478 149 aa12.41□□□□□ -0.42
NPM3-204ENST00000474993 TRBV20-1A0A075B6N2 111 aa12.4□□□□□ -0.42
NPM3-204ENST00000474993 A0A1W2PPM0 123 aa12.4□□□□□ -0.42
NPM3-204ENST00000474993 DNAL4O96015 105 aa12.4□□□□□ -0.42
NPM3-204ENST00000474993 FAT1Q14517 4588 aa12.4□□□□□ -0.42
NPM3-204ENST00000474993 VPS13BQ7Z7G8 4022 aa12.4□□□□□ -0.43
NPM3-204ENST00000474993 OCIAD2Q56VL3 154 aa12.39□□□□□ -0.43
NPM3-204ENST00000474993 FAM218AQ96MZ4 157 aa12.39□□□□□ -0.43
NPM3-204ENST00000474993 ATXN8Q156A1 80 aa12.38□□□□□ -0.43
NPM3-204ENST00000474993 SPRR4Q96PI1 79 aa12.38□□□□□ -0.43
NPM3-204ENST00000474993 LST1O00453 97 aa12.37□□□□□ -0.43
NPM3-204ENST00000474993 TRACP01848 142 aa12.37□□□□□ -0.43
NPM3-204ENST00000474993 Q6ZQY7 126 aa12.36□□□□□ -0.43
NPM3-204ENST00000474993 H3BQ85 93 aa12.35□□□□□ -0.43
NPM3-204ENST00000474993 GAGE2AQ6NT46 116 aa12.35□□□□□ -0.43
NPM3-204ENST00000474993 SRRM2Q9UQ35 2752 aaKnown RBP12.34□□□□□ -0.43
NPM3-204ENST00000474993 TEX49A0A1B0GTD5 131 aa12.34□□□□□ -0.43
NPM3-204ENST00000474993 ST20-AS1Q8NBB2 130 aa12.34□□□□□ -0.43
NPM3-204ENST00000474993 PPDPFLQ8WWR9 84 aa12.34□□□□□ -0.43
NPM3-204ENST00000474993 TCL1BO95988 128 aa12.33□□□□□ -0.44
NPM3-204ENST00000474993 DEFB105AQ8NG35 78 aa12.33□□□□□ -0.44
NPM3-204ENST00000474993 IGLV5-48A0A075B6I7 105 aa12.32□□□□□ -0.44
NPM3-204ENST00000474993 FAM229BQ4G0N7 80 aa12.32□□□□□ -0.44
NPM3-204ENST00000474993 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
NPM3-204ENST00000474993 SPRR1BP22528 89 aa12.31□□□□□ -0.44
NPM3-204ENST00000474993 KRTAP4-5Q9BYR2 181 aa12.31□□□□□ -0.44
NPM3-204ENST00000474993 ORMDL1Q9P0S3 153 aa12.31□□□□□ -0.44
NPM3-204ENST00000474993 SPCS1Q9Y6A9 102 aa12.3□□□□□ -0.44
NPM3-204ENST00000474993 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
NPM3-204ENST00000474993 CRYGAP11844 174 aa12.28□□□□□ -0.44
NPM3-204ENST00000474993 LAMTOR3Q9UHA4 124 aa12.28□□□□□ -0.44
NPM3-204ENST00000474993 LINC01547P58512 204 aaPredicted RBP12.26□□□□□ -0.45
NPM3-204ENST00000474993 Q8N377 158 aa12.26□□□□□ -0.45
NPM3-204ENST00000474993 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
NPM3-204ENST00000474993 OXTP01178 125 aa12.24□□□□□ -0.45
NPM3-204ENST00000474993 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
NPM3-204ENST00000474993 ANAPC11Q9NYG5 84 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms