RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
VARS-223ENST00000474643 C2orf91Q6ZV80 131 aa9.09□□□□□ -0.95
VARS-223ENST00000474643 NPC2P61916 151 aa9.08□□□□□ -0.96
VARS-223ENST00000474643 TSTD3H0UI37 97 aa9.07□□□□□ -0.96
VARS-223ENST00000474643 PRR4Q16378 134 aa9.07□□□□□ -0.96
VARS-223ENST00000474643 SOSTDC1Q6X4U4 206 aa9.07□□□□□ -0.96
VARS-223ENST00000474643 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
VARS-223ENST00000474643 TMEM126AQ9H061 195 aa9.07□□□□□ -0.96
VARS-223ENST00000474643 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
VARS-223ENST00000474643 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
VARS-223ENST00000474643 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
VARS-223ENST00000474643 CBY1Q9Y3M2 126 aa9.05□□□□□ -0.96
VARS-223ENST00000474643 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
VARS-223ENST00000474643 PRLHP81277 87 aa9.03□□□□□ -0.96
VARS-223ENST00000474643 HSD52Q0P140 79 aa9.03□□□□□ -0.96
VARS-223ENST00000474643 PRYO14603 147 aa9.02□□□□□ -0.97
VARS-223ENST00000474643 S100A7L2Q5SY68 101 aa9.02□□□□□ -0.97
VARS-223ENST00000474643 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 TMEM238LA0A1B0GVL6 79 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 A6NJY4 79 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 TSPAN13O95857 204 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 CRYGAP11844 174 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 DDTP30046 118 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 CEND1Q8N111 149 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 RNF213Q63HN8 5207 aa9.01□□□□□ -0.97
VARS-223ENST00000474643 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
VARS-223ENST00000474643 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
VARS-223ENST00000474643 PRO1933Q9H354 126 aa9□□□□□ -0.97
VARS-223ENST00000474643 IGLV6-57P01721 117 aa8.99□□□□□ -0.97
VARS-223ENST00000474643 HIGD2AQ9BW72 106 aa8.99□□□□□ -0.97
VARS-223ENST00000474643 A4D1N5 150 aa8.98□□□□□ -0.97
VARS-223ENST00000474643 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
VARS-223ENST00000474643 KCNQ1DNQ9H478 68 aa8.98□□□□□ -0.97
VARS-223ENST00000474643 LPAP08519 4548 aa8.97□□□□□ -0.97
VARS-223ENST00000474643 OR13C6PQ8NH95 151 aa8.97□□□□□ -0.97
VARS-223ENST00000474643 A0A087X002 238 aa8.95□□□□□ -0.98
VARS-223ENST00000474643 A0A0B4J2C4 111 aa8.95□□□□□ -0.98
VARS-223ENST00000474643 LINC00337Q8N6G1 96 aa8.95□□□□□ -0.98
VARS-223ENST00000474643 TRAV23DV6A0A075B6W5 121 aa8.94□□□□□ -0.98
VARS-223ENST00000474643 M0R143 59 aa8.94□□□□□ -0.98
VARS-223ENST00000474643 A0A1B0GWB2 263 aa8.93□□□□□ -0.98
VARS-223ENST00000474643 SPRR1AP35321 89 aa8.93□□□□□ -0.98
VARS-223ENST00000474643 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
VARS-223ENST00000474643 CFC1P0CG37 223 aa8.92□□□□□ -0.98
VARS-223ENST00000474643 FXYD2P54710 66 aa8.92□□□□□ -0.98
VARS-223ENST00000474643 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
VARS-223ENST00000474643 TRBV7-6A0A0J9YX20 115 aa8.91□□□□□ -0.98
VARS-223ENST00000474643 A6NDN8 102 aa8.91□□□□□ -0.98
VARS-223ENST00000474643 HINT1P49773 126 aaPredicted RBP8.91□□□□□ -0.98
VARS-223ENST00000474643 CTAG1AP78358 180 aa8.91□□□□□ -0.98
VARS-223ENST00000474643 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
VARS-223ENST00000474643 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.98
VARS-223ENST00000474643 BVES-AS1Q5T3Y7 98 aa8.9□□□□□ -0.98
VARS-223ENST00000474643 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
VARS-223ENST00000474643 B5MCH6 92 aa8.89□□□□□ -0.99
VARS-223ENST00000474643 KRTAP4-16G5E9R7 235 aaPredicted RBP8.89□□□□□ -0.99
VARS-223ENST00000474643 ZNF73O43830 326 aaPredicted RBP8.89□□□□□ -0.99
VARS-223ENST00000474643 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
VARS-223ENST00000474643 SMCR5Q8TEV8 140 aa8.89□□□□□ -0.99
VARS-223ENST00000474643 PRO1854Q9UHT4 67 aa8.89□□□□□ -0.99
VARS-223ENST00000474643 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
VARS-223ENST00000474643 Q6ZRX8 168 aa8.86□□□□□ -0.99
VARS-223ENST00000474643 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
VARS-223ENST00000474643 SPRR4Q96PI1 79 aa8.85□□□□□ -0.99
VARS-223ENST00000474643 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
VARS-223ENST00000474643 SMIM11BQ8TCY0 68 aa8.84□□□□□ -0.99
VARS-223ENST00000474643 VAMP3Q15836 100 aa8.83□□□□□ -1
VARS-223ENST00000474643 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
VARS-223ENST00000474643 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
VARS-223ENST00000474643 C6orf99Q4VX62 202 aa8.82□□□□□ -1
VARS-223ENST00000474643 GAGE2AQ6NT46 116 aa8.82□□□□□ -1
VARS-223ENST00000474643 Q9BRP9 147 aa8.82□□□□□ -1
VARS-223ENST00000474643 ERC2-IT1O76042 136 aa8.81□□□□□ -1
VARS-223ENST00000474643 COX7BP24311 80 aa8.81□□□□□ -1
VARS-223ENST00000474643 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
VARS-223ENST00000474643 H0YGX0 51 aa8.8□□□□□ -1
VARS-223ENST00000474643 CDIP1Q9H305 208 aa8.8□□□□□ -1
VARS-223ENST00000474643 DHRS4-AS1Q9P1J3 65 aa8.8□□□□□ -1
VARS-223ENST00000474643 C3orf22Q8N5N4 141 aa8.79□□□□□ -1
VARS-223ENST00000474643 Q1RN00 199 aa8.77□□□□□ -1.01
VARS-223ENST00000474643 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
VARS-223ENST00000474643 K7ERJ3 54 aa8.76□□□□□ -1.01
VARS-223ENST00000474643 COX6CP09669 75 aa8.76□□□□□ -1.01
VARS-223ENST00000474643 SPAG11AQ6PDA7 123 aa8.76□□□□□ -1.01
VARS-223ENST00000474643 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
VARS-223ENST00000474643 A0A1B0GX51 115 aa8.75□□□□□ -1.01
VARS-223ENST00000474643 H7C2G1 150 aa8.75□□□□□ -1.01
VARS-223ENST00000474643 SNCGO76070 127 aa8.75□□□□□ -1.01
VARS-223ENST00000474643 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
VARS-223ENST00000474643 SLC25A20O43772 301 aa8.74□□□□□ -1.01
VARS-223ENST00000474643 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
VARS-223ENST00000474643 ST20-AS1Q8NBB2 130 aa8.74□□□□□ -1.01
VARS-223ENST00000474643 SNHG12Q9BXW3 62 aa8.74□□□□□ -1.01
VARS-223ENST00000474643 TRIAP1O43715 76 aa8.72□□□□□ -1.01
VARS-223ENST00000474643 BATFQ16520 125 aa8.72□□□□□ -1.01
VARS-223ENST00000474643 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
VARS-223ENST00000474643 MUC2Q02817 5179 aa8.71□□□□□ -1.01
VARS-223ENST00000474643 PSMB2P49721 201 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms