RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 B5MCH6 92 aa9.36□□□□□ -0.91
ITGB1-210ENST00000474568 TIMM17BO60830 172 aa9.36□□□□□ -0.91
ITGB1-210ENST00000474568 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
ITGB1-210ENST00000474568 HIST3H2BBQ8N257 126 aa9.36□□□□□ -0.91
ITGB1-210ENST00000474568 TRAV23DV6A0A075B6W5 121 aa9.35□□□□□ -0.91
ITGB1-210ENST00000474568 S100A2P29034 98 aa9.35□□□□□ -0.91
ITGB1-210ENST00000474568 SCGB1D4Q6XE38 83 aa9.34□□□□□ -0.91
ITGB1-210ENST00000474568 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
ITGB1-210ENST00000474568 OR13C6PQ8NH95 151 aa9.34□□□□□ -0.91
ITGB1-210ENST00000474568 HIST1H2BLQ99880 126 aa9.34□□□□□ -0.91
ITGB1-210ENST00000474568 ZNF706Q9Y5V0 76 aaPredicted RBP9.34□□□□□ -0.91
ITGB1-210ENST00000474568 ERC2-IT1O76042 136 aa9.33□□□□□ -0.92
ITGB1-210ENST00000474568 SPANXCQ9NY87 97 aa9.33□□□□□ -0.92
ITGB1-210ENST00000474568 S100A6P06703 90 aa9.32□□□□□ -0.92
ITGB1-210ENST00000474568 PCP2Q8IVA1 136 aa9.32□□□□□ -0.92
ITGB1-210ENST00000474568 Q9BRP9 147 aa9.32□□□□□ -0.92
ITGB1-210ENST00000474568 LCE2BO14633 110 aa9.31□□□□□ -0.92
ITGB1-210ENST00000474568 ZNF73O43830 326 aaPredicted RBP9.31□□□□□ -0.92
ITGB1-210ENST00000474568 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
ITGB1-210ENST00000474568 Q6ZRX8 168 aa9.3□□□□□ -0.92
ITGB1-210ENST00000474568 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
ITGB1-210ENST00000474568 SPANXDQ9BXN6 97 aa9.28□□□□□ -0.92
ITGB1-210ENST00000474568 AKR1D1P51857 326 aa9.27□□□□□ -0.93
ITGB1-210ENST00000474568 SNRPEP62304 92 aaKnown RBP9.27□□□□□ -0.93
ITGB1-210ENST00000474568 RNF213Q63HN8 5207 aa9.26□□□□□ -0.93
ITGB1-210ENST00000474568 JOSD1Q15040 202 aaPredicted RBP9.26□□□□□ -0.93
ITGB1-210ENST00000474568 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
ITGB1-210ENST00000474568 HINT1P49773 126 aaPredicted RBP9.25□□□□□ -0.93
ITGB1-210ENST00000474568 LINC00483Q53H64 154 aa9.25□□□□□ -0.93
ITGB1-210ENST00000474568 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
ITGB1-210ENST00000474568 Q8NBF4 154 aa9.25□□□□□ -0.93
ITGB1-210ENST00000474568 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
ITGB1-210ENST00000474568 ST20-AS1Q8NBB2 130 aa9.24□□□□□ -0.93
ITGB1-210ENST00000474568 CBY1Q9Y3M2 126 aa9.24□□□□□ -0.93
ITGB1-210ENST00000474568 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
ITGB1-210ENST00000474568 MOBPQ13875 183 aa9.23□□□□□ -0.93
ITGB1-210ENST00000474568 IFITM1P13164 125 aa9.22□□□□□ -0.93
ITGB1-210ENST00000474568 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
ITGB1-210ENST00000474568 SCGB1D1O95968 90 aa9.21□□□□□ -0.94
ITGB1-210ENST00000474568 C6orf99Q4VX62 202 aa9.21□□□□□ -0.94
ITGB1-210ENST00000474568 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
ITGB1-210ENST00000474568 A6NDN8 102 aa9.2□□□□□ -0.94
ITGB1-210ENST00000474568 COX7BP24311 80 aa9.2□□□□□ -0.94
ITGB1-210ENST00000474568 C5orf52A6NGY3 159 aa9.19□□□□□ -0.94
ITGB1-210ENST00000474568 SMCPP49901 116 aaPredicted RBP9.19□□□□□ -0.94
ITGB1-210ENST00000474568 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
ITGB1-210ENST00000474568 Q6ZVH6 145 aa9.19□□□□□ -0.94
ITGB1-210ENST00000474568 C9orf153Q5TBE3 101 aa9.18□□□□□ -0.94
ITGB1-210ENST00000474568 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
ITGB1-210ENST00000474568 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
ITGB1-210ENST00000474568 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
ITGB1-210ENST00000474568 SSBP3-AS1Q7Z2R9 100 aa9.13□□□□□ -0.95
ITGB1-210ENST00000474568 DEFB105AQ8NG35 78 aa9.13□□□□□ -0.95
ITGB1-210ENST00000474568 TRAV13-2A0A0B4J235 113 aa9.12□□□□□ -0.95
ITGB1-210ENST00000474568 CTAG1AP78358 180 aa9.12□□□□□ -0.95
ITGB1-210ENST00000474568 SPINK1P00995 79 aa9.11□□□□□ -0.95
ITGB1-210ENST00000474568 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
ITGB1-210ENST00000474568 A0A1B0GWB2 263 aa9.1□□□□□ -0.95
ITGB1-210ENST00000474568 A4D1N5 150 aa9.1□□□□□ -0.95
ITGB1-210ENST00000474568 TAL2Q16559 108 aa9.1□□□□□ -0.95
ITGB1-210ENST00000474568 TRBV7-6A0A0J9YX20 115 aa9.09□□□□□ -0.95
ITGB1-210ENST00000474568 SPRR1BP22528 89 aa9.09□□□□□ -0.95
ITGB1-210ENST00000474568 C12orf57Q99622 126 aa9.09□□□□□ -0.95
ITGB1-210ENST00000474568 COX8AP10176 69 aa9.08□□□□□ -0.96
ITGB1-210ENST00000474568 Q1RN00 199 aa9.08□□□□□ -0.96
ITGB1-210ENST00000474568 HIST1H4GQ99525 98 aa9.08□□□□□ -0.96
ITGB1-210ENST00000474568 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
ITGB1-210ENST00000474568 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
ITGB1-210ENST00000474568 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
ITGB1-210ENST00000474568 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
ITGB1-210ENST00000474568 LAMTOR3Q9UHA4 124 aa9.07□□□□□ -0.96
ITGB1-210ENST00000474568 SPATA45Q537H7 98 aa9.06□□□□□ -0.96
ITGB1-210ENST00000474568 SLC25A34Q6PIV7 304 aa9.06□□□□□ -0.96
ITGB1-210ENST00000474568 TPRXLQ17RH7 258 aa9.05□□□□□ -0.96
ITGB1-210ENST00000474568 TEX49A0A1B0GTD5 131 aa9.04□□□□□ -0.96
ITGB1-210ENST00000474568 FP248Q71RG6 208 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-210ENST00000474568 Q8N377 158 aa9.04□□□□□ -0.96
ITGB1-210ENST00000474568 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
ITGB1-210ENST00000474568 MUC17Q685J3 4493 aa9.02□□□□□ -0.96
ITGB1-210ENST00000474568 DLEU1O43261 78 aa9.02□□□□□ -0.97
ITGB1-210ENST00000474568 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-210ENST00000474568 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
ITGB1-210ENST00000474568 VAMP3Q15836 100 aa9.01□□□□□ -0.97
ITGB1-210ENST00000474568 NHP2Q9NX24 153 aaKnown RBP9.01□□□□□ -0.97
ITGB1-210ENST00000474568 SLC25A20O43772 301 aa9□□□□□ -0.97
ITGB1-210ENST00000474568 SMIM29Q86T20 159 aa9□□□□□ -0.97
ITGB1-210ENST00000474568 IGLV5-48A0A075B6I7 105 aa8.99□□□□□ -0.97
ITGB1-210ENST00000474568 H7C2G1 150 aa8.99□□□□□ -0.97
ITGB1-210ENST00000474568 TMA7Q9Y2S6 64 aaKnown RBP8.99□□□□□ -0.97
ITGB1-210ENST00000474568 MUC2Q02817 5179 aa8.98□□□□□ -0.97
ITGB1-210ENST00000474568 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
ITGB1-210ENST00000474568 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
ITGB1-210ENST00000474568 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
ITGB1-210ENST00000474568 C2orf91Q6ZV80 131 aa8.97□□□□□ -0.97
ITGB1-210ENST00000474568 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
ITGB1-210ENST00000474568 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
ITGB1-210ENST00000474568 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
ITGB1-210ENST00000474568 CFC1P0CG37 223 aa8.95□□□□□ -0.98
ITGB1-210ENST00000474568 Q6ZQY7 126 aa8.95□□□□□ -0.98
ITGB1-210ENST00000474568 RAB37Q96AX2 223 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms