RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
CUL4A-208ENST00000474116 IGKCP01834 107 aa9.43□□□□□ -0.9
CUL4A-208ENST00000474116 LEPROTO15243 131 aa9.42□□□□□ -0.9
CUL4A-208ENST00000474116 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
CUL4A-208ENST00000474116 HERV-K104P63124 156 aa9.42□□□□□ -0.9
CUL4A-208ENST00000474116 Q9BRP9 147 aa9.42□□□□□ -0.9
CUL4A-208ENST00000474116 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
CUL4A-208ENST00000474116 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
CUL4A-208ENST00000474116 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
CUL4A-208ENST00000474116 MEIG1Q5JSS6 88 aa9.41□□□□□ -0.9
CUL4A-208ENST00000474116 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
CUL4A-208ENST00000474116 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.9
CUL4A-208ENST00000474116 HERVK_113P61574 105 aa9.4□□□□□ -0.9
CUL4A-208ENST00000474116 LINC00587B1AMM8 73 aa9.39□□□□□ -0.91
CUL4A-208ENST00000474116 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
CUL4A-208ENST00000474116 KRTAP9-7A8MTY7 169 aa9.38□□□□□ -0.91
CUL4A-208ENST00000474116 J3QQQ9 107 aa9.38□□□□□ -0.91
CUL4A-208ENST00000474116 M0R2T5 61 aa9.37□□□□□ -0.91
CUL4A-208ENST00000474116 COA6Q5JTJ3 125 aaKnown RBP9.37□□□□□ -0.91
CUL4A-208ENST00000474116 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
CUL4A-208ENST00000474116 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.36□□□□□ -0.91
CUL4A-208ENST00000474116 LGALS3P17931 250 aaKnown RBP9.36□□□□□ -0.91
CUL4A-208ENST00000474116 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
CUL4A-208ENST00000474116 Q6ZRX8 168 aa9.36□□□□□ -0.91
CUL4A-208ENST00000474116 NMUP48645 174 aa9.35□□□□□ -0.91
CUL4A-208ENST00000474116 S100A12P80511 92 aa9.35□□□□□ -0.91
CUL4A-208ENST00000474116 PET117Q6UWS5 81 aa9.35□□□□□ -0.91
CUL4A-208ENST00000474116 LINC01545Q5VT33 79 aa9.34□□□□□ -0.91
CUL4A-208ENST00000474116 E9PLD3 99 aa9.33□□□□□ -0.92
CUL4A-208ENST00000474116 S100A1P23297 94 aa9.33□□□□□ -0.92
CUL4A-208ENST00000474116 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
CUL4A-208ENST00000474116 DDTP30046 118 aa9.32□□□□□ -0.92
CUL4A-208ENST00000474116 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
CUL4A-208ENST00000474116 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
CUL4A-208ENST00000474116 KRTDAPP60985 99 aa9.3□□□□□ -0.92
CUL4A-208ENST00000474116 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
CUL4A-208ENST00000474116 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
CUL4A-208ENST00000474116 ST20-AS1Q8NBB2 130 aa9.29□□□□□ -0.92
CUL4A-208ENST00000474116 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
CUL4A-208ENST00000474116 IGLV6-57P01721 117 aa9.27□□□□□ -0.93
CUL4A-208ENST00000474116 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
CUL4A-208ENST00000474116 JOSD1Q15040 202 aaPredicted RBP9.26□□□□□ -0.93
CUL4A-208ENST00000474116 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
CUL4A-208ENST00000474116 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
CUL4A-208ENST00000474116 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
CUL4A-208ENST00000474116 NPC2P61916 151 aa9.24□□□□□ -0.93
CUL4A-208ENST00000474116 MIEN1Q9BRT3 115 aa9.24□□□□□ -0.93
CUL4A-208ENST00000474116 C20orf202A1L168 122 aa9.23□□□□□ -0.93
CUL4A-208ENST00000474116 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
CUL4A-208ENST00000474116 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
CUL4A-208ENST00000474116 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
CUL4A-208ENST00000474116 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
CUL4A-208ENST00000474116 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
CUL4A-208ENST00000474116 SPRR1BP22528 89 aa9.22□□□□□ -0.93
CUL4A-208ENST00000474116 TTTY13Q9BZ97 58 aa9.22□□□□□ -0.93
CUL4A-208ENST00000474116 NDUFC2O95298 119 aa9.21□□□□□ -0.94
CUL4A-208ENST00000474116 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
CUL4A-208ENST00000474116 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.94
CUL4A-208ENST00000474116 LITAFQ99732 161 aa9.21□□□□□ -0.94
CUL4A-208ENST00000474116 ATOH7Q8N100 152 aa9.2□□□□□ -0.94
CUL4A-208ENST00000474116 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
CUL4A-208ENST00000474116 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
CUL4A-208ENST00000474116 TIMM17BO60830 172 aa9.19□□□□□ -0.94
CUL4A-208ENST00000474116 ANKRD39Q53RE8 183 aa9.19□□□□□ -0.94
CUL4A-208ENST00000474116 SSPOA2VEC9 5147 aa9.19□□□□□ -0.94
CUL4A-208ENST00000474116 S100A2P29034 98 aa9.18□□□□□ -0.94
CUL4A-208ENST00000474116 LINC00308Q8TCZ7 52 aa9.18□□□□□ -0.94
CUL4A-208ENST00000474116 HIST1H2BLQ99880 126 aa9.18□□□□□ -0.94
CUL4A-208ENST00000474116 USH2AO75445 5202 aa9.16□□□□□ -0.94
CUL4A-208ENST00000474116 AKR1D1P51857 326 aa9.16□□□□□ -0.94
CUL4A-208ENST00000474116 CD164Q04900 197 aa9.16□□□□□ -0.94
CUL4A-208ENST00000474116 S100A6P06703 90 aa9.15□□□□□ -0.94
CUL4A-208ENST00000474116 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
CUL4A-208ENST00000474116 C1orf195Q5TG92 126 aa9.14□□□□□ -0.95
CUL4A-208ENST00000474116 Q5XG85 94 aa9.14□□□□□ -0.95
CUL4A-208ENST00000474116 SCGB1D4Q6XE38 83 aa9.14□□□□□ -0.95
CUL4A-208ENST00000474116 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
CUL4A-208ENST00000474116 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
CUL4A-208ENST00000474116 PCP2Q8IVA1 136 aa9.13□□□□□ -0.95
CUL4A-208ENST00000474116 SNRPEP62304 92 aaKnown RBP9.12□□□□□ -0.95
CUL4A-208ENST00000474116 H7C2G1 150 aa9.11□□□□□ -0.95
CUL4A-208ENST00000474116 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
CUL4A-208ENST00000474116 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
CUL4A-208ENST00000474116 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
CUL4A-208ENST00000474116 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
CUL4A-208ENST00000474116 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
CUL4A-208ENST00000474116 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
CUL4A-208ENST00000474116 KRTAP9-8Q9BYQ0 159 aa9.08□□□□□ -0.96
CUL4A-208ENST00000474116 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
CUL4A-208ENST00000474116 Q1RN00 199 aa9.07□□□□□ -0.96
CUL4A-208ENST00000474116 HSBP1L1C9JCN9 74 aa9.06□□□□□ -0.96
CUL4A-208ENST00000474116 CFC1P0CG37 223 aa9.06□□□□□ -0.96
CUL4A-208ENST00000474116 IFITM1P13164 125 aa9.06□□□□□ -0.96
CUL4A-208ENST00000474116 Q6ZVH6 145 aa9.06□□□□□ -0.96
CUL4A-208ENST00000474116 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
CUL4A-208ENST00000474116 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
CUL4A-208ENST00000474116 FCGBPQ9Y6R7 5405 aaPredicted RBP9.05□□□□□ -0.96
CUL4A-208ENST00000474116 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
CUL4A-208ENST00000474116 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
CUL4A-208ENST00000474116 TAL2Q16559 108 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms