RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 Q6ZRX8 168 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 Q8NBF4 154 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BHQ93079 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BNQ99877 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BMQ99879 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 SYS1-DBNDD2H3BUS1 97 aa5.15□□□□□ -1.59
USF1-204ENST00000472217 IGLV6-57P01721 117 aa5.15□□□□□ -1.59
USF1-204ENST00000472217 S100A7L2Q5SY68 101 aa5.15□□□□□ -1.59
USF1-204ENST00000472217 GAGE2AQ6NT46 116 aa5.15□□□□□ -1.59
USF1-204ENST00000472217 Q9BRP9 147 aa5.15□□□□□ -1.59
USF1-204ENST00000472217 CDIP1Q9H305 208 aa5.15□□□□□ -1.59
USF1-204ENST00000472217 MUC2Q02817 5179 aa5.14□□□□□ -1.59
USF1-204ENST00000472217 TRAV23DV6A0A075B6W5 121 aa5.13□□□□□ -1.59
USF1-204ENST00000472217 LINC01545Q5VT33 79 aa5.13□□□□□ -1.59
USF1-204ENST00000472217 LITAFQ99732 161 aa5.13□□□□□ -1.59
USF1-204ENST00000472217 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
USF1-204ENST00000472217 A0A0U1RQV1 116 aa5.12□□□□□ -1.59
USF1-204ENST00000472217 ZNF73O43830 326 aaPredicted RBP5.12□□□□□ -1.59
USF1-204ENST00000472217 SPINK1P00995 79 aa5.12□□□□□ -1.59
USF1-204ENST00000472217 MOBPQ13875 183 aa5.12□□□□□ -1.59
USF1-204ENST00000472217 PET117Q6UWS5 81 aa5.12□□□□□ -1.59
USF1-204ENST00000472217 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
USF1-204ENST00000472217 JOSD1Q15040 202 aaPredicted RBP5.11□□□□□ -1.59
USF1-204ENST00000472217 LINC00308Q8TCZ7 52 aa5.11□□□□□ -1.59
USF1-204ENST00000472217 TTTY13Q9BZ97 58 aa5.11□□□□□ -1.59
USF1-204ENST00000472217 ZNF815PA8K554 130 aa5.1□□□□□ -1.59
USF1-204ENST00000472217 TIMM17BO60830 172 aa5.1□□□□□ -1.59
USF1-204ENST00000472217 C3orf79P0CE67 100 aa5.1□□□□□ -1.59
USF1-204ENST00000472217 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
USF1-204ENST00000472217 SPANXCQ9NY87 97 aa5.1□□□□□ -1.59
USF1-204ENST00000472217 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
USF1-204ENST00000472217 COA6Q5JTJ3 125 aaKnown RBP5.09□□□□□ -1.59
USF1-204ENST00000472217 XP32Q5T750 250 aa5.09□□□□□ -1.59
USF1-204ENST00000472217 ST20-AS1Q8NBB2 130 aa5.09□□□□□ -1.59
USF1-204ENST00000472217 OR13C6PQ8NH95 151 aa5.09□□□□□ -1.59
USF1-204ENST00000472217 KRTDAPP60985 99 aa5.08□□□□□ -1.6
USF1-204ENST00000472217 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
USF1-204ENST00000472217 Q8N377 158 aa5.08□□□□□ -1.6
USF1-204ENST00000472217 CBY1Q9Y3M2 126 aa5.08□□□□□ -1.6
USF1-204ENST00000472217 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
USF1-204ENST00000472217 HINT1P49773 126 aaPredicted RBP5.07□□□□□ -1.6
USF1-204ENST00000472217 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
USF1-204ENST00000472217 SPANXDQ9BXN6 97 aa5.07□□□□□ -1.6
USF1-204ENST00000472217 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
USF1-204ENST00000472217 C5orf52A6NGY3 159 aa5.06□□□□□ -1.6
USF1-204ENST00000472217 SLC25A20O43772 301 aa5.05□□□□□ -1.6
USF1-204ENST00000472217 SPRR1BP22528 89 aa5.05□□□□□ -1.6
USF1-204ENST00000472217 ANKRD39Q53RE8 183 aa5.05□□□□□ -1.6
USF1-204ENST00000472217 SCGB1D4Q6XE38 83 aa5.05□□□□□ -1.6
USF1-204ENST00000472217 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
USF1-204ENST00000472217 C20orf202A1L168 122 aa5.04□□□□□ -1.6
USF1-204ENST00000472217 COX7BP24311 80 aa5.04□□□□□ -1.6
USF1-204ENST00000472217 ELOF1P60002 83 aaKnown RBP5.04□□□□□ -1.6
USF1-204ENST00000472217 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
USF1-204ENST00000472217 LINC00518Q8N0U6 118 aa5.04□□□□□ -1.6
USF1-204ENST00000472217 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
USF1-204ENST00000472217 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
USF1-204ENST00000472217 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
USF1-204ENST00000472217 PCP2Q8IVA1 136 aa5.02□□□□□ -1.61
USF1-204ENST00000472217 IFITM1P13164 125 aa5.01□□□□□ -1.61
USF1-204ENST00000472217 COPS9Q8WXC6 57 aa5.01□□□□□ -1.61
USF1-204ENST00000472217 LAMTOR3Q9UHA4 124 aa5.01□□□□□ -1.61
USF1-204ENST00000472217 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
USF1-204ENST00000472217 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
USF1-204ENST00000472217 A6NDN8 102 aa5□□□□□ -1.61
USF1-204ENST00000472217 S100A1P23297 94 aa5□□□□□ -1.61
USF1-204ENST00000472217 Q1RN00 199 aa5□□□□□ -1.61
USF1-204ENST00000472217 HRCT1Q6UXD1 115 aa5□□□□□ -1.61
USF1-204ENST00000472217 Q6ZVH6 145 aa5□□□□□ -1.61
USF1-204ENST00000472217 MUSTN1Q8IVN3 82 aa5□□□□□ -1.61
USF1-204ENST00000472217 DEFB105AQ8NG35 78 aa5□□□□□ -1.61
USF1-204ENST00000472217 A0A1B0GWB2 263 aa4.99□□□□□ -1.61
USF1-204ENST00000472217 AKR1D1P51857 326 aa4.99□□□□□ -1.61
USF1-204ENST00000472217 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
USF1-204ENST00000472217 TAL2Q16559 108 aa4.99□□□□□ -1.61
USF1-204ENST00000472217 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
USF1-204ENST00000472217 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
USF1-204ENST00000472217 TEX49A0A1B0GTD5 131 aa4.98□□□□□ -1.61
USF1-204ENST00000472217 H3BS24 57 aa4.98□□□□□ -1.61
USF1-204ENST00000472217 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
USF1-204ENST00000472217 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
USF1-204ENST00000472217 SNRPEP62304 92 aaKnown RBP4.97□□□□□ -1.61
USF1-204ENST00000472217 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
USF1-204ENST00000472217 HIST3H2BBQ8N257 126 aa4.97□□□□□ -1.61
USF1-204ENST00000472217 HIST1H2BLQ99880 126 aa4.97□□□□□ -1.61
USF1-204ENST00000472217 IGLV5-48A0A075B6I7 105 aa4.96□□□□□ -1.62
USF1-204ENST00000472217 TRAV13-2A0A0B4J235 113 aa4.96□□□□□ -1.62
USF1-204ENST00000472217 CD164Q04900 197 aa4.96□□□□□ -1.62
USF1-204ENST00000472217 SMIM11BQ8TCY0 68 aa4.96□□□□□ -1.62
USF1-204ENST00000472217 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
USF1-204ENST00000472217 PRO1933Q9H354 126 aa4.96□□□□□ -1.62
USF1-204ENST00000472217 A4D1N5 150 aa4.95□□□□□ -1.62
USF1-204ENST00000472217 H7C2G1 150 aa4.95□□□□□ -1.62
USF1-204ENST00000472217 S100A2P29034 98 aa4.95□□□□□ -1.62
USF1-204ENST00000472217 TMA7Q9Y2S6 64 aaKnown RBP4.95□□□□□ -1.62
USF1-204ENST00000472217 A0A0G2JQZ4 141 aa4.94□□□□□ -1.62
USF1-204ENST00000472217 C9orf92A6NGG3 77 aa4.94□□□□□ -1.62
USF1-204ENST00000472217 NHP2Q9NX24 153 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms