RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	SERTAD4-AS1	Q5TG53	156 aa		11.02	□□□□□ -0.64
PCBP4-208	ENST00000471308	C7orf33	Q8WU49	177 aa		11.02	□□□□□ -0.64
PCBP4-208	ENST00000471308	IGLV5-37	A0A075B6J1	123 aa		11.02	□□□□□ -0.65
PCBP4-208	ENST00000471308	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.01	□□□□□ -0.65
PCBP4-208	ENST00000471308		A0A087WVE0	104 aa		11	□□□□□ -0.65
PCBP4-208	ENST00000471308		J3KT08	172 aa		11	□□□□□ -0.65
PCBP4-208	ENST00000471308	CASC10	Q5T4H9	136 aa		11	□□□□□ -0.65
PCBP4-208	ENST00000471308	COL6A5	A8TX70	2615 aa		10.99	□□□□□ -0.65
PCBP4-208	ENST00000471308	DNAH1	Q9P2D7	4330 aa		10.99	□□□□□ -0.65
PCBP4-208	ENST00000471308	PRY	O14603	147 aa		10.98	□□□□□ -0.65
PCBP4-208	ENST00000471308	NBEAL1	Q6ZS30	2694 aa		10.97	□□□□□ -0.65
PCBP4-208	ENST00000471308		M0R2N4	97 aa		10.97	□□□□□ -0.65
PCBP4-208	ENST00000471308	LOC107984640	A0A0U1RRK4	108 aa		10.96	□□□□□ -0.65
PCBP4-208	ENST00000471308		Q6ZVQ6	151 aa		10.96	□□□□□ -0.65
PCBP4-208	ENST00000471308	DHRS4-AS1	Q9P1J3	65 aa		10.96	□□□□□ -0.66
PCBP4-208	ENST00000471308	IGLV1-50	A0A075B6I6	118 aa		10.94	□□□□□ -0.66
PCBP4-208	ENST00000471308	SERP2	Q8N6R1	65 aa		10.94	□□□□□ -0.66
PCBP4-208	ENST00000471308	TMEM258	P61165	79 aa		10.94	□□□□□ -0.66
PCBP4-208	ENST00000471308		Q6ZRX8	168 aa		10.94	□□□□□ -0.66
PCBP4-208	ENST00000471308	LINC01547	P58512	204 aa	Predicted RBP	10.93	□□□□□ -0.66
PCBP4-208	ENST00000471308	CXCL6	P80162	114 aa		10.93	□□□□□ -0.66
PCBP4-208	ENST00000471308	SPRR1A	P35321	89 aa		10.93	□□□□□ -0.66
PCBP4-208	ENST00000471308	FAM19A1	Q7Z5A9	133 aa		10.93	□□□□□ -0.66
PCBP4-208	ENST00000471308	FAM168B	A1KXE4	195 aa		10.92	□□□□□ -0.66
PCBP4-208	ENST00000471308	ETDC	A0A1B0GVM5	59 aa		10.91	□□□□□ -0.66
PCBP4-208	ENST00000471308	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.91	□□□□□ -0.66
PCBP4-208	ENST00000471308	HAMP	P81172	84 aa		10.91	□□□□□ -0.66
PCBP4-208	ENST00000471308	RPL37AP8	A6NKH3	93 aa		10.9	□□□□□ -0.66
PCBP4-208	ENST00000471308	MRPL55	Q7Z7F7	128 aa	Known RBP	10.9	□□□□□ -0.66
PCBP4-208	ENST00000471308	C5orf47	Q569G3	176 aa		10.89	□□□□□ -0.67
PCBP4-208	ENST00000471308	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.89	□□□□□ -0.67
PCBP4-208	ENST00000471308	KRTAP7-1	Q8IUC3	87 aa		10.88	□□□□□ -0.67
PCBP4-208	ENST00000471308		Q8N377	158 aa		10.88	□□□□□ -0.67
PCBP4-208	ENST00000471308	BCE1	O60756	84 aa		10.86	□□□□□ -0.67
PCBP4-208	ENST00000471308	UBE2DNL	Q8IWF7	75 aa		10.86	□□□□□ -0.67
PCBP4-208	ENST00000471308		Q9BRP9	147 aa		10.86	□□□□□ -0.67
PCBP4-208	ENST00000471308	IGLV5-48	A0A075B6I7	105 aa		10.86	□□□□□ -0.67
PCBP4-208	ENST00000471308	CNBP	P62633	177 aa	Known RBP	10.86	□□□□□ -0.67
PCBP4-208	ENST00000471308	DEFB105A	Q8NG35	78 aa		10.85	□□□□□ -0.67
PCBP4-208	ENST00000471308	KRTAP1-5	Q9BYS1	174 aa		10.85	□□□□□ -0.67
PCBP4-208	ENST00000471308	CYSTM1	Q9H1C7	97 aa		10.85	□□□□□ -0.67
PCBP4-208	ENST00000471308	APLN	Q9ULZ1	77 aa		10.85	□□□□□ -0.67
PCBP4-208	ENST00000471308	DPH3	Q96FX2	82 aa		10.85	□□□□□ -0.67
PCBP4-208	ENST00000471308	PSCA	O43653	123 aa		10.84	□□□□□ -0.67
PCBP4-208	ENST00000471308	B9D2	Q9BPU9	175 aa		10.83	□□□□□ -0.68
PCBP4-208	ENST00000471308	C16orf90	A8MZG2	172 aa		10.83	□□□□□ -0.68
PCBP4-208	ENST00000471308	C14orf177	Q52M58	125 aa		10.83	□□□□□ -0.68
PCBP4-208	ENST00000471308		A0A1B0GW54	56 aa		10.82	□□□□□ -0.68
PCBP4-208	ENST00000471308	REG3G	Q6UW15	175 aa		10.82	□□□□□ -0.68
PCBP4-208	ENST00000471308	MGAM2	Q2M2H8	2515 aa		10.81	□□□□□ -0.68
PCBP4-208	ENST00000471308	UBE2B	P63146	152 aa		10.79	□□□□□ -0.68
PCBP4-208	ENST00000471308	COL7A1	Q02388	2944 aa		10.79	□□□□□ -0.68
PCBP4-208	ENST00000471308		A0A096LNI7	61 aa		10.78	□□□□□ -0.68
PCBP4-208	ENST00000471308	FUS	P35637	526 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
PCBP4-208	ENST00000471308	TNP2	Q05952	138 aa		10.78	□□□□□ -0.68
PCBP4-208	ENST00000471308	DNAH9	Q9NYC9	4486 aa		10.78	□□□□□ -0.68
PCBP4-208	ENST00000471308	NREP	Q16612	68 aa		10.78	□□□□□ -0.68
PCBP4-208	ENST00000471308	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.77	□□□□□ -0.69
PCBP4-208	ENST00000471308	TRAV7	A0A075B6U4	112 aa		10.76	□□□□□ -0.69
PCBP4-208	ENST00000471308	SCX	Q7RTU7	201 aa		10.76	□□□□□ -0.69
PCBP4-208	ENST00000471308	ST20-AS1	Q8NBB2	130 aa		10.76	□□□□□ -0.69
PCBP4-208	ENST00000471308	STAB2	Q8WWQ8	2551 aa		10.76	□□□□□ -0.69
PCBP4-208	ENST00000471308	IGKV2-24	A0A0C4DH68	120 aa		10.75	□□□□□ -0.69
PCBP4-208	ENST00000471308	C1orf137	Q5JT78	98 aa		10.75	□□□□□ -0.69
PCBP4-208	ENST00000471308	PKIG	Q9Y2B9	76 aa		10.75	□□□□□ -0.69
PCBP4-208	ENST00000471308	NUPR2	A6NF83	97 aa		10.74	□□□□□ -0.69
PCBP4-208	ENST00000471308	C3orf84	H3BNL1	204 aa		10.74	□□□□□ -0.69
PCBP4-208	ENST00000471308	ERC2-IT1	O76042	136 aa		10.74	□□□□□ -0.69
PCBP4-208	ENST00000471308	MDFI	Q99750	246 aa		10.74	□□□□□ -0.69
PCBP4-208	ENST00000471308	OXT	P01178	125 aa		10.72	□□□□□ -0.69
PCBP4-208	ENST00000471308		Q8NBF4	154 aa		10.72	□□□□□ -0.69
PCBP4-208	ENST00000471308	LYST	Q99698	3801 aa		10.72	□□□□□ -0.69
PCBP4-208	ENST00000471308	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.71	□□□□□ -0.69
PCBP4-208	ENST00000471308		A0A1W2PNN7	141 aa		10.71	□□□□□ -0.69
PCBP4-208	ENST00000471308	DNAH10	Q8IVF4	4471 aa		10.71	□□□□□ -0.7
PCBP4-208	ENST00000471308		A0A1W2PNM2	257 aa		10.7	□□□□□ -0.7
PCBP4-208	ENST00000471308	BPY2	O14599	106 aa		10.7	□□□□□ -0.7
PCBP4-208	ENST00000471308	SPRR4	Q96PI1	79 aa		10.7	□□□□□ -0.7
PCBP4-208	ENST00000471308	NBDY	A0A0U1RRE5	68 aa		10.69	□□□□□ -0.7
PCBP4-208	ENST00000471308	EPM2A	B3EWF7	344 aa		10.69	□□□□□ -0.7
PCBP4-208	ENST00000471308		F8WEM9	126 aa		10.69	□□□□□ -0.7
PCBP4-208	ENST00000471308	IGKV4-1	P06312	121 aa		10.69	□□□□□ -0.7
PCBP4-208	ENST00000471308		Q5XG85	94 aa		10.67	□□□□□ -0.7
PCBP4-208	ENST00000471308	C9orf163	Q8N9P6	203 aa		10.67	□□□□□ -0.7
PCBP4-208	ENST00000471308	SMIM29	Q86T20	159 aa		10.67	□□□□□ -0.7
PCBP4-208	ENST00000471308	C20orf197	Q8N268	126 aa		10.67	□□□□□ -0.7
PCBP4-208	ENST00000471308	LRCOL1	A6NCL2	159 aa		10.66	□□□□□ -0.7
PCBP4-208	ENST00000471308	PRLH	P81277	87 aa		10.65	□□□□□ -0.7
PCBP4-208	ENST00000471308	LINC00474	Q9P2X8	69 aa		10.65	□□□□□ -0.7
PCBP4-208	ENST00000471308		H0Y9J4	135 aa		10.64	□□□□□ -0.71
PCBP4-208	ENST00000471308		Q8N9L7	120 aa		10.63	□□□□□ -0.71
PCBP4-208	ENST00000471308	LINC00476	Q8WZB0	136 aa		10.63	□□□□□ -0.71
PCBP4-208	ENST00000471308	CHTF8	P0CG12	524 aa		10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308	KLKP1	Q107X0	134 aa		10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308		Q6ZRN7	208 aa	Predicted RBP	10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308	IGLV8-61	A0A075B6I0	122 aa		10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308	FAM236D	A0A1B0GTK5	79 aa		10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308	FAM236C	P0DP71	79 aa		10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308	HIGD2A	Q9BW72	106 aa		10.62	□□□□□ -0.71
PCBP4-208	ENST00000471308	CSMD3	Q7Z407	3707 aa		10.61	□□□□□ -0.71

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