RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ABCA13Q86UQ4 5058 aa7.7□□□□□ -1.18
SPTLC1-204ENST00000469778 LOC105371267A0A1B0GV96 52 aa7.69□□□□□ -1.18
SPTLC1-204ENST00000469778 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
SPTLC1-204ENST00000469778 FAM19A1Q7Z5A9 133 aa7.69□□□□□ -1.18
SPTLC1-204ENST00000469778 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 TMEM238LA0A1B0GVL6 79 aa7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 A4D1N5 150 aa7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 A6NJY4 79 aa7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 ZNF73O43830 326 aaPredicted RBP7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 C2orf91Q6ZV80 131 aa7.68□□□□□ -1.18
SPTLC1-204ENST00000469778 A6NDN8 102 aa7.67□□□□□ -1.18
SPTLC1-204ENST00000469778 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
SPTLC1-204ENST00000469778 B5MCH6 92 aa7.65□□□□□ -1.18
SPTLC1-204ENST00000469778 HSD52Q0P140 79 aa7.65□□□□□ -1.18
SPTLC1-204ENST00000469778 CEND1Q8N111 149 aa7.65□□□□□ -1.18
SPTLC1-204ENST00000469778 Q6ZRX8 168 aa7.64□□□□□ -1.19
SPTLC1-204ENST00000469778 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
SPTLC1-204ENST00000469778 PRLHP81277 87 aa7.63□□□□□ -1.19
SPTLC1-204ENST00000469778 VAMP3Q15836 100 aa7.63□□□□□ -1.19
SPTLC1-204ENST00000469778 ZNF706Q9Y5V0 76 aaPredicted RBP7.63□□□□□ -1.19
SPTLC1-204ENST00000469778 FLG2Q5D862 2391 aaPredicted RBP7.62□□□□□ -1.19
SPTLC1-204ENST00000469778 A0A0B4J2C4 111 aa7.62□□□□□ -1.19
SPTLC1-204ENST00000469778 RAB37Q96AX2 223 aa7.62□□□□□ -1.19
SPTLC1-204ENST00000469778 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
SPTLC1-204ENST00000469778 A0A1B0GWB2 263 aa7.61□□□□□ -1.19
SPTLC1-204ENST00000469778 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
SPTLC1-204ENST00000469778 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
SPTLC1-204ENST00000469778 C12orf57Q99622 126 aa7.61□□□□□ -1.19
SPTLC1-204ENST00000469778 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
SPTLC1-204ENST00000469778 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
SPTLC1-204ENST00000469778 CFC1BP0CG36 223 aa7.6□□□□□ -1.19
SPTLC1-204ENST00000469778 CFC1P0CG37 223 aa7.6□□□□□ -1.19
SPTLC1-204ENST00000469778 COX7BP24311 80 aa7.6□□□□□ -1.19
SPTLC1-204ENST00000469778 FAM229BQ4G0N7 80 aa7.6□□□□□ -1.19
SPTLC1-204ENST00000469778 RPL13AP40429 203 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-204ENST00000469778 ELOF1P60002 83 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-204ENST00000469778 SMIM11BQ8TCY0 68 aa7.59□□□□□ -1.19
SPTLC1-204ENST00000469778 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
SPTLC1-204ENST00000469778 NHP2Q9NX24 153 aaKnown RBP7.59□□□□□ -1.19
SPTLC1-204ENST00000469778 PRO1854Q9UHT4 67 aa7.59□□□□□ -1.19
SPTLC1-204ENST00000469778 J3QL48 77 aa7.58□□□□□ -1.2
SPTLC1-204ENST00000469778 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
SPTLC1-204ENST00000469778 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
SPTLC1-204ENST00000469778 PRO1933Q9H354 126 aa7.57□□□□□ -1.2
SPTLC1-204ENST00000469778 M0R143 59 aa7.56□□□□□ -1.2
SPTLC1-204ENST00000469778 SLC25A20O43772 301 aa7.56□□□□□ -1.2
SPTLC1-204ENST00000469778 CRYGAP11844 174 aa7.56□□□□□ -1.2
SPTLC1-204ENST00000469778 FXYD2P54710 66 aa7.56□□□□□ -1.2
SPTLC1-204ENST00000469778 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
SPTLC1-204ENST00000469778 Q9BRP9 147 aa7.56□□□□□ -1.2
SPTLC1-204ENST00000469778 H0YGX0 51 aa7.55□□□□□ -1.2
SPTLC1-204ENST00000469778 SNCGO76070 127 aa7.55□□□□□ -1.2
SPTLC1-204ENST00000469778 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
SPTLC1-204ENST00000469778 MYCBP2O75592 4640 aa7.54□□□□□ -1.2
SPTLC1-204ENST00000469778 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
SPTLC1-204ENST00000469778 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
SPTLC1-204ENST00000469778 CTAG1AP78358 180 aa7.52□□□□□ -1.21
SPTLC1-204ENST00000469778 ERC2-IT1O76042 136 aa7.51□□□□□ -1.21
SPTLC1-204ENST00000469778 Q1RN00 199 aa7.51□□□□□ -1.21
SPTLC1-204ENST00000469778 LINC00575Q6W349 94 aa7.51□□□□□ -1.21
SPTLC1-204ENST00000469778 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-204ENST00000469778 H7C2G1 150 aa7.5□□□□□ -1.21
SPTLC1-204ENST00000469778 SPRR1BP22528 89 aa7.5□□□□□ -1.21
SPTLC1-204ENST00000469778 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
SPTLC1-204ENST00000469778 hADV29S1A0JD25 119 aa7.49□□□□□ -1.21
SPTLC1-204ENST00000469778 GHRHP01286 108 aa7.49□□□□□ -1.21
SPTLC1-204ENST00000469778 COX6CP09669 75 aa7.49□□□□□ -1.21
SPTLC1-204ENST00000469778 GAGE2AQ6NT46 116 aa7.49□□□□□ -1.21
SPTLC1-204ENST00000469778 TEX49A0A1B0GTD5 131 aa7.48□□□□□ -1.21
SPTLC1-204ENST00000469778 A0A1B0GX51 115 aa7.48□□□□□ -1.21
SPTLC1-204ENST00000469778 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
SPTLC1-204ENST00000469778 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.21
SPTLC1-204ENST00000469778 IGLV5-48A0A075B6I7 105 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 A0A087X002 238 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 PSMB2P49721 201 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 OCIAD2Q56VL3 154 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 SSBP3-AS1Q7Z2R9 100 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
SPTLC1-204ENST00000469778 LAMTOR3Q9UHA4 124 aa7.45□□□□□ -1.22
SPTLC1-204ENST00000469778 K7ERJ3 54 aa7.44□□□□□ -1.22
SPTLC1-204ENST00000469778 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
SPTLC1-204ENST00000469778 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
SPTLC1-204ENST00000469778 H3BQ85 93 aa7.43□□□□□ -1.22
SPTLC1-204ENST00000469778 TRIAP1O43715 76 aa7.43□□□□□ -1.22
SPTLC1-204ENST00000469778 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
SPTLC1-204ENST00000469778 TSPAN13O95857 204 aa7.42□□□□□ -1.22
SPTLC1-204ENST00000469778 C4orf48Q5BLP8 95 aa7.41□□□□□ -1.22
SPTLC1-204ENST00000469778 Q6ZQY7 126 aa7.41□□□□□ -1.22
SPTLC1-204ENST00000469778 DEFB105AQ8NG35 78 aa7.41□□□□□ -1.22
SPTLC1-204ENST00000469778 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
SPTLC1-204ENST00000469778 Q8N377 158 aa7.4□□□□□ -1.22
SPTLC1-204ENST00000469778 LINC01547P58512 204 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1-204ENST00000469778 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
SPTLC1-204ENST00000469778 Q8NBF4 154 aa7.39□□□□□ -1.23
SPTLC1-204ENST00000469778 TNXBP22105 4242 aa7.39□□□□□ -1.23
SPTLC1-204ENST00000469778 DNAL4O96015 105 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms