RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
GPC1-207ENST00000466624 H0Y9J4 135 aa9.75□□□□□ -0.85
GPC1-207ENST00000466624 HSD52Q0P140 79 aa9.75□□□□□ -0.85
GPC1-207ENST00000466624 CEND1Q8N111 149 aa9.75□□□□□ -0.85
GPC1-207ENST00000466624 UBE2AP49459 152 aa9.74□□□□□ -0.85
GPC1-207ENST00000466624 FAM19A1Q7Z5A9 133 aa9.74□□□□□ -0.85
GPC1-207ENST00000466624 PRO1933Q9H354 126 aa9.74□□□□□ -0.85
GPC1-207ENST00000466624 A6NDN8 102 aa9.73□□□□□ -0.85
GPC1-207ENST00000466624 ZNF73O43830 326 aaPredicted RBP9.73□□□□□ -0.85
GPC1-207ENST00000466624 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
GPC1-207ENST00000466624 TMEM238LA0A1B0GVL6 79 aa9.72□□□□□ -0.85
GPC1-207ENST00000466624 ETDCA0A1B0GVM5 59 aa9.72□□□□□ -0.85
GPC1-207ENST00000466624 A6NJY4 79 aa9.72□□□□□ -0.85
GPC1-207ENST00000466624 PRLHP81277 87 aa9.71□□□□□ -0.86
GPC1-207ENST00000466624 PCLOQ9Y6V0 5065 aa9.71□□□□□ -0.86
GPC1-207ENST00000466624 TSTD3H0UI37 97 aa9.7□□□□□ -0.86
GPC1-207ENST00000466624 A0A0B4J2C4 111 aa9.69□□□□□ -0.86
GPC1-207ENST00000466624 B5MCH6 92 aa9.69□□□□□ -0.86
GPC1-207ENST00000466624 HINT1P49773 126 aaPredicted RBP9.69□□□□□ -0.86
GPC1-207ENST00000466624 CFC1BP0CG36 223 aa9.68□□□□□ -0.86
GPC1-207ENST00000466624 CFC1P0CG37 223 aa9.68□□□□□ -0.86
GPC1-207ENST00000466624 FXYD2P54710 66 aa9.68□□□□□ -0.86
GPC1-207ENST00000466624 Q6ZRX8 168 aa9.68□□□□□ -0.86
GPC1-207ENST00000466624 FLG2Q5D862 2391 aaPredicted RBP9.68□□□□□ -0.86
GPC1-207ENST00000466624 TRBV7-6A0A0J9YX20 115 aa9.67□□□□□ -0.86
GPC1-207ENST00000466624 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
GPC1-207ENST00000466624 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
GPC1-207ENST00000466624 C6orf99Q4VX62 202 aa9.66□□□□□ -0.86
GPC1-207ENST00000466624 RAB37Q96AX2 223 aa9.66□□□□□ -0.86
GPC1-207ENST00000466624 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
GPC1-207ENST00000466624 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
GPC1-207ENST00000466624 OXTP01178 125 aa9.64□□□□□ -0.87
GPC1-207ENST00000466624 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
GPC1-207ENST00000466624 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
GPC1-207ENST00000466624 A0A1B0GWB2 263 aa9.63□□□□□ -0.87
GPC1-207ENST00000466624 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
GPC1-207ENST00000466624 LRP1Q07954 4544 aaKnown RBP9.63□□□□□ -0.87
GPC1-207ENST00000466624 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
GPC1-207ENST00000466624 COX7BP24311 80 aa9.62□□□□□ -0.87
GPC1-207ENST00000466624 Q9BRP9 147 aa9.62□□□□□ -0.87
GPC1-207ENST00000466624 PRO1854Q9UHT4 67 aa9.62□□□□□ -0.87
GPC1-207ENST00000466624 M0R143 59 aa9.61□□□□□ -0.87
GPC1-207ENST00000466624 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
GPC1-207ENST00000466624 CTAG1AP78358 180 aa9.61□□□□□ -0.87
GPC1-207ENST00000466624 BVES-AS1Q5T3Y7 98 aa9.61□□□□□ -0.87
GPC1-207ENST00000466624 NHP2Q9NX24 153 aaKnown RBP9.61□□□□□ -0.87
GPC1-207ENST00000466624 DHRS4-AS1Q9P1J3 65 aa9.61□□□□□ -0.87
GPC1-207ENST00000466624 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
GPC1-207ENST00000466624 ZNF706Q9Y5V0 76 aaPredicted RBP9.6□□□□□ -0.87
GPC1-207ENST00000466624 VAMP3Q15836 100 aa9.59□□□□□ -0.87
GPC1-207ENST00000466624 H7C2G1 150 aa9.56□□□□□ -0.88
GPC1-207ENST00000466624 ERC2-IT1O76042 136 aa9.56□□□□□ -0.88
GPC1-207ENST00000466624 SPRR4Q96PI1 79 aa9.56□□□□□ -0.88
GPC1-207ENST00000466624 K7ERJ3 54 aa9.55□□□□□ -0.88
GPC1-207ENST00000466624 Q1RN00 199 aa9.55□□□□□ -0.88
GPC1-207ENST00000466624 FAM229BQ4G0N7 80 aa9.55□□□□□ -0.88
GPC1-207ENST00000466624 H0YGX0 51 aa9.52□□□□□ -0.89
GPC1-207ENST00000466624 LINC00483Q53H64 154 aa9.52□□□□□ -0.89
GPC1-207ENST00000466624 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
GPC1-207ENST00000466624 TNXBP22105 4242 aa9.51□□□□□ -0.89
GPC1-207ENST00000466624 SLC25A20O43772 301 aa9.51□□□□□ -0.89
GPC1-207ENST00000466624 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
GPC1-207ENST00000466624 CRYGAP11844 174 aa9.51□□□□□ -0.89
GPC1-207ENST00000466624 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
GPC1-207ENST00000466624 TSPAN13O95857 204 aa9.5□□□□□ -0.89
GPC1-207ENST00000466624 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
GPC1-207ENST00000466624 J3QL48 77 aa9.49□□□□□ -0.89
GPC1-207ENST00000466624 TRIAP1O43715 76 aa9.49□□□□□ -0.89
GPC1-207ENST00000466624 ANAPC11Q9NYG5 84 aa9.49□□□□□ -0.89
GPC1-207ENST00000466624 A0A087X002 238 aa9.48□□□□□ -0.89
GPC1-207ENST00000466624 hADV29S1A0JD25 119 aa9.48□□□□□ -0.89
GPC1-207ENST00000466624 SPRR1BP22528 89 aa9.48□□□□□ -0.89
GPC1-207ENST00000466624 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
GPC1-207ENST00000466624 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
GPC1-207ENST00000466624 IGLV5-48A0A075B6I7 105 aa9.46□□□□□ -0.9
GPC1-207ENST00000466624 A0A1B0GX51 115 aa9.46□□□□□ -0.9
GPC1-207ENST00000466624 COX6CP09669 75 aa9.46□□□□□ -0.9
GPC1-207ENST00000466624 PSMB2P49721 201 aa9.46□□□□□ -0.9
GPC1-207ENST00000466624 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
GPC1-207ENST00000466624 SNCGO76070 127 aa9.45□□□□□ -0.9
GPC1-207ENST00000466624 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
GPC1-207ENST00000466624 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
GPC1-207ENST00000466624 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.44□□□□□ -0.9
GPC1-207ENST00000466624 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
GPC1-207ENST00000466624 BATFQ16520 125 aa9.43□□□□□ -0.9
GPC1-207ENST00000466624 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
GPC1-207ENST00000466624 Q6ZQY7 126 aa9.42□□□□□ -0.9
GPC1-207ENST00000466624 TYMSOSQ8TAI1 123 aa9.42□□□□□ -0.9
GPC1-207ENST00000466624 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.9
GPC1-207ENST00000466624 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
GPC1-207ENST00000466624 PPDPFLQ8WWR9 84 aa9.4□□□□□ -0.9
GPC1-207ENST00000466624 DEFB105AQ8NG35 78 aa9.39□□□□□ -0.91
GPC1-207ENST00000466624 CLEC2BQ92478 149 aa9.39□□□□□ -0.91
GPC1-207ENST00000466624 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
GPC1-207ENST00000466624 Q8N377 158 aa9.38□□□□□ -0.91
GPC1-207ENST00000466624 SNHG12Q9BXW3 62 aa9.38□□□□□ -0.91
GPC1-207ENST00000466624 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
GPC1-207ENST00000466624 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
GPC1-207ENST00000466624 GHRHP01286 108 aa9.36□□□□□ -0.91
GPC1-207ENST00000466624 SSBP3-AS1Q7Z2R9 100 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms