RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 SCGB3A1Q96QR1 104 aa6.59□□□□□ -1.35
CNOT4-208ENST00000465721 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
CNOT4-208ENST00000465721 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
CNOT4-208ENST00000465721 HSBP1L1C9JCN9 74 aa6.58□□□□□ -1.36
CNOT4-208ENST00000465721 ATOH7Q8N100 152 aa6.58□□□□□ -1.36
CNOT4-208ENST00000465721 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
CNOT4-208ENST00000465721 RPL24P83731 157 aaKnown RBP6.57□□□□□ -1.36
CNOT4-208ENST00000465721 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
CNOT4-208ENST00000465721 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
CNOT4-208ENST00000465721 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
CNOT4-208ENST00000465721 HBDP02042 147 aa6.56□□□□□ -1.36
CNOT4-208ENST00000465721 A0A096LNJ9 63 aa6.55□□□□□ -1.36
CNOT4-208ENST00000465721 H3BRM9 83 aa6.55□□□□□ -1.36
CNOT4-208ENST00000465721 SPINK1P00995 79 aa6.55□□□□□ -1.36
CNOT4-208ENST00000465721 PMVKQ15126 192 aa6.55□□□□□ -1.36
CNOT4-208ENST00000465721 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-208ENST00000465721 COX17Q14061 63 aa6.54□□□□□ -1.36
CNOT4-208ENST00000465721 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
CNOT4-208ENST00000465721 PMCHL2Q9BQD1 86 aa6.54□□□□□ -1.36
CNOT4-208ENST00000465721 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-208ENST00000465721 LINC01549A6NIU2 74 aa6.53□□□□□ -1.36
CNOT4-208ENST00000465721 MT1HP80294 61 aa6.53□□□□□ -1.36
CNOT4-208ENST00000465721 Q8N377 158 aa6.53□□□□□ -1.36
CNOT4-208ENST00000465721 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
CNOT4-208ENST00000465721 H0Y8G0 127 aa6.52□□□□□ -1.37
CNOT4-208ENST00000465721 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
CNOT4-208ENST00000465721 SLC25A34Q6PIV7 304 aa6.52□□□□□ -1.37
CNOT4-208ENST00000465721 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
CNOT4-208ENST00000465721 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
CNOT4-208ENST00000465721 BATFQ16520 125 aa6.51□□□□□ -1.37
CNOT4-208ENST00000465721 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
CNOT4-208ENST00000465721 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
CNOT4-208ENST00000465721 PRYO14603 147 aa6.5□□□□□ -1.37
CNOT4-208ENST00000465721 COX8AP10176 69 aa6.5□□□□□ -1.37
CNOT4-208ENST00000465721 SPRR1AP35321 89 aa6.5□□□□□ -1.37
CNOT4-208ENST00000465721 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
CNOT4-208ENST00000465721 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
CNOT4-208ENST00000465721 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
CNOT4-208ENST00000465721 HINT1P49773 126 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-208ENST00000465721 MOBPQ13875 183 aa6.48□□□□□ -1.37
CNOT4-208ENST00000465721 DLEU1O43261 78 aa6.47□□□□□ -1.37
CNOT4-208ENST00000465721 SFTA2Q6UW10 78 aa6.47□□□□□ -1.37
CNOT4-208ENST00000465721 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
CNOT4-208ENST00000465721 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
CNOT4-208ENST00000465721 C11orf86A6NJI1 115 aa6.46□□□□□ -1.38
CNOT4-208ENST00000465721 SLC25A20O43772 301 aa6.46□□□□□ -1.38
CNOT4-208ENST00000465721 KRTAP4-12Q9BQ66 201 aa6.46□□□□□ -1.38
CNOT4-208ENST00000465721 KCNQ1DNQ9H478 68 aa6.46□□□□□ -1.38
CNOT4-208ENST00000465721 NCR3O14931 201 aa6.45□□□□□ -1.38
CNOT4-208ENST00000465721 DPM2O94777 84 aa6.45□□□□□ -1.38
CNOT4-208ENST00000465721 IGKCP01834 107 aa6.45□□□□□ -1.38
CNOT4-208ENST00000465721 LINC00158P58513 81 aa6.45□□□□□ -1.38
CNOT4-208ENST00000465721 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
CNOT4-208ENST00000465721 GAGE2AQ6NT46 116 aa6.45□□□□□ -1.38
CNOT4-208ENST00000465721 BOD1L2Q8IYS8 172 aa6.45□□□□□ -1.38
CNOT4-208ENST00000465721 TRAV12-1A0A0B4J245 112 aa6.44□□□□□ -1.38
CNOT4-208ENST00000465721 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
CNOT4-208ENST00000465721 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
CNOT4-208ENST00000465721 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
CNOT4-208ENST00000465721 BVES-AS1Q5T3Y7 98 aa6.44□□□□□ -1.38
CNOT4-208ENST00000465721 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
CNOT4-208ENST00000465721 PLNP26678 52 aa6.43□□□□□ -1.38
CNOT4-208ENST00000465721 C2orf91Q6ZV80 131 aa6.43□□□□□ -1.38
CNOT4-208ENST00000465721 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
CNOT4-208ENST00000465721 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
CNOT4-208ENST00000465721 B5MCH6 92 aa6.42□□□□□ -1.38
CNOT4-208ENST00000465721 HSD52Q0P140 79 aa6.42□□□□□ -1.38
CNOT4-208ENST00000465721 TMEM170BQ5T4T1 132 aa6.42□□□□□ -1.38
CNOT4-208ENST00000465721 SMIM13P0DJ93 91 aa6.41□□□□□ -1.38
CNOT4-208ENST00000465721 NMUP48645 174 aa6.41□□□□□ -1.38
CNOT4-208ENST00000465721 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
CNOT4-208ENST00000465721 Q9BRP9 147 aa6.41□□□□□ -1.38
CNOT4-208ENST00000465721 HIGD1BQ9P298 99 aa6.41□□□□□ -1.38
CNOT4-208ENST00000465721 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
CNOT4-208ENST00000465721 IGLV8-61A0A075B6I0 122 aa6.4□□□□□ -1.38
CNOT4-208ENST00000465721 MIR7-3HGQ8N6C7 128 aa6.4□□□□□ -1.38
CNOT4-208ENST00000465721 A6NDN8 102 aa6.39□□□□□ -1.39
CNOT4-208ENST00000465721 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
CNOT4-208ENST00000465721 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
CNOT4-208ENST00000465721 CHTOPQ9Y3Y2 248 aaKnown RBP6.39□□□□□ -1.39
CNOT4-208ENST00000465721 TMEM223A0PJW6 202 aa6.38□□□□□ -1.39
CNOT4-208ENST00000465721 Q6ZRX8 168 aa6.38□□□□□ -1.39
CNOT4-208ENST00000465721 PCP2Q8IVA1 136 aa6.38□□□□□ -1.39
CNOT4-208ENST00000465721 USH2AO75445 5202 aa6.37□□□□□ -1.39
CNOT4-208ENST00000465721 UBE2V1Q13404 147 aa6.37□□□□□ -1.39
CNOT4-208ENST00000465721 TAL2Q16559 108 aa6.37□□□□□ -1.39
CNOT4-208ENST00000465721 MEIG1Q5JSS6 88 aa6.37□□□□□ -1.39
CNOT4-208ENST00000465721 C9orf153Q5TBE3 101 aa6.37□□□□□ -1.39
CNOT4-208ENST00000465721 VAMP3Q15836 100 aa6.35□□□□□ -1.39
CNOT4-208ENST00000465721 C9orf92A6NGG3 77 aa6.34□□□□□ -1.39
CNOT4-208ENST00000465721 E9PLD3 99 aa6.34□□□□□ -1.39
CNOT4-208ENST00000465721 HERVK_113P61574 105 aa6.34□□□□□ -1.39
CNOT4-208ENST00000465721 HERV-K104P63124 156 aa6.34□□□□□ -1.39
CNOT4-208ENST00000465721 Q6ZVH6 145 aa6.34□□□□□ -1.39
CNOT4-208ENST00000465721 TRBV10-2A0A0K0K1G8 114 aa6.33□□□□□ -1.4
CNOT4-208ENST00000465721 MYMXA0A1B0GTQ4 84 aa6.33□□□□□ -1.4
CNOT4-208ENST00000465721 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
CNOT4-208ENST00000465721 M0R2T5 61 aa6.32□□□□□ -1.4
CNOT4-208ENST00000465721 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
CNOT4-208ENST00000465721 CEND1Q8N111 149 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms