RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
HDAC6-214ENST00000465269 PRLHP81277 87 aa8.33□□□□□ -1.08
HDAC6-214ENST00000465269 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
HDAC6-214ENST00000465269 DAND5Q8N907 189 aa8.33□□□□□ -1.08
HDAC6-214ENST00000465269 SND1-IT1Q9HBX3 110 aa8.33□□□□□ -1.08
HDAC6-214ENST00000465269 PAM16Q9Y3D7 125 aa8.33□□□□□ -1.08
HDAC6-214ENST00000465269 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
HDAC6-214ENST00000465269 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
HDAC6-214ENST00000465269 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
HDAC6-214ENST00000465269 ADAMTSL4-AS1Q5T5F5 129 aa8.31□□□□□ -1.08
HDAC6-214ENST00000465269 FCGBPQ9Y6R7 5405 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-214ENST00000465269 CTAG1AP78358 180 aa8.3□□□□□ -1.08
HDAC6-214ENST00000465269 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
HDAC6-214ENST00000465269 NPC2P61916 151 aa8.29□□□□□ -1.08
HDAC6-214ENST00000465269 C14orf144Q96I85 54 aa8.29□□□□□ -1.08
HDAC6-214ENST00000465269 IGKV2-28A0A075B6P5 120 aa8.28□□□□□ -1.08
HDAC6-214ENST00000465269 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
HDAC6-214ENST00000465269 M0R2T5 61 aa8.28□□□□□ -1.08
HDAC6-214ENST00000465269 IGKV2D-28P01615 120 aa8.28□□□□□ -1.08
HDAC6-214ENST00000465269 XP32Q5T750 250 aa8.27□□□□□ -1.09
HDAC6-214ENST00000465269 LITAFQ99732 161 aa8.27□□□□□ -1.09
HDAC6-214ENST00000465269 TIMM17BO60830 172 aa8.26□□□□□ -1.09
HDAC6-214ENST00000465269 COX8AP10176 69 aa8.26□□□□□ -1.09
HDAC6-214ENST00000465269 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
HDAC6-214ENST00000465269 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
HDAC6-214ENST00000465269 Q8NDZ9 215 aa8.26□□□□□ -1.09
HDAC6-214ENST00000465269 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-214ENST00000465269 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
HDAC6-214ENST00000465269 TMEM238C9JI98 176 aa8.24□□□□□ -1.09
HDAC6-214ENST00000465269 VPREB1P12018 145 aa8.24□□□□□ -1.09
HDAC6-214ENST00000465269 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
HDAC6-214ENST00000465269 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
HDAC6-214ENST00000465269 NKAPP1Q8N9T2 125 aa8.24□□□□□ -1.09
HDAC6-214ENST00000465269 Q8NBF4 154 aa8.24□□□□□ -1.09
HDAC6-214ENST00000465269 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
HDAC6-214ENST00000465269 SYNE2Q8WXH0 6885 aaKnown RBP8.23□□□□□ -1.09
HDAC6-214ENST00000465269 S100A12P80511 92 aa8.23□□□□□ -1.09
HDAC6-214ENST00000465269 FAM19A1Q7Z5A9 133 aa8.23□□□□□ -1.09
HDAC6-214ENST00000465269 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
HDAC6-214ENST00000465269 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
HDAC6-214ENST00000465269 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
HDAC6-214ENST00000465269 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
HDAC6-214ENST00000465269 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
HDAC6-214ENST00000465269 IGLV5-37A0A075B6J1 123 aa8.21□□□□□ -1.1
HDAC6-214ENST00000465269 NCR3O14931 201 aa8.21□□□□□ -1.1
HDAC6-214ENST00000465269 DLEU1O43261 78 aa8.21□□□□□ -1.1
HDAC6-214ENST00000465269 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
HDAC6-214ENST00000465269 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.1
HDAC6-214ENST00000465269 SPANXCQ9NY87 97 aa8.21□□□□□ -1.1
HDAC6-214ENST00000465269 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
HDAC6-214ENST00000465269 M0R378 163 aa8.18□□□□□ -1.1
HDAC6-214ENST00000465269 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
HDAC6-214ENST00000465269 Q6ZVH6 145 aa8.18□□□□□ -1.1
HDAC6-214ENST00000465269 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
HDAC6-214ENST00000465269 TMEM126AQ9H061 195 aa8.18□□□□□ -1.1
HDAC6-214ENST00000465269 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-214ENST00000465269 NDUFC2O95298 119 aa8.17□□□□□ -1.1
HDAC6-214ENST00000465269 IFITM1P13164 125 aa8.17□□□□□ -1.1
HDAC6-214ENST00000465269 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
HDAC6-214ENST00000465269 HIST1H4GQ99525 98 aa8.17□□□□□ -1.1
HDAC6-214ENST00000465269 SPRR4Q96PI1 79 aa8.16□□□□□ -1.1
HDAC6-214ENST00000465269 PRO1933Q9H354 126 aa8.16□□□□□ -1.1
HDAC6-214ENST00000465269 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
HDAC6-214ENST00000465269 COPS9Q8WXC6 57 aa8.15□□□□□ -1.1
HDAC6-214ENST00000465269 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
HDAC6-214ENST00000465269 Q8N377 158 aa8.14□□□□□ -1.11
HDAC6-214ENST00000465269 UQCR10Q9UDW1 63 aa8.14□□□□□ -1.11
HDAC6-214ENST00000465269 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
HDAC6-214ENST00000465269 TRBV10-2A0A0K0K1G8 114 aa8.13□□□□□ -1.11
HDAC6-214ENST00000465269 KRTAP4-16G5E9R7 235 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-214ENST00000465269 SPINK1P00995 79 aa8.13□□□□□ -1.11
HDAC6-214ENST00000465269 S100A7L2Q5SY68 101 aa8.13□□□□□ -1.11
HDAC6-214ENST00000465269 OR13C6PQ8NH95 151 aa8.13□□□□□ -1.11
HDAC6-214ENST00000465269 C12orf57Q99622 126 aa8.13□□□□□ -1.11
HDAC6-214ENST00000465269 DDTP30046 118 aa8.12□□□□□ -1.11
HDAC6-214ENST00000465269 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
HDAC6-214ENST00000465269 A4D1N5 150 aa8.11□□□□□ -1.11
HDAC6-214ENST00000465269 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
HDAC6-214ENST00000465269 COX6B2Q6YFQ2 88 aa8.09□□□□□ -1.11
HDAC6-214ENST00000465269 A6NDN8 102 aa8.08□□□□□ -1.12
HDAC6-214ENST00000465269 TAL2Q16559 108 aa8.08□□□□□ -1.12
HDAC6-214ENST00000465269 CEND1Q8N111 149 aa8.08□□□□□ -1.12
HDAC6-214ENST00000465269 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
HDAC6-214ENST00000465269 PRYO14603 147 aa8.07□□□□□ -1.12
HDAC6-214ENST00000465269 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
HDAC6-214ENST00000465269 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
HDAC6-214ENST00000465269 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
HDAC6-214ENST00000465269 HSD52Q0P140 79 aa8.05□□□□□ -1.12
HDAC6-214ENST00000465269 TSTD3H0UI37 97 aa8.04□□□□□ -1.12
HDAC6-214ENST00000465269 SLC25A20O43772 301 aa8.04□□□□□ -1.12
HDAC6-214ENST00000465269 CFC1P0CG37 223 aa8.04□□□□□ -1.12
HDAC6-214ENST00000465269 FXYD2P54710 66 aa8.04□□□□□ -1.12
HDAC6-214ENST00000465269 MOBPQ13875 183 aa8.04□□□□□ -1.12
HDAC6-214ENST00000465269 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
HDAC6-214ENST00000465269 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
HDAC6-214ENST00000465269 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
HDAC6-214ENST00000465269 SPRR1AP35321 89 aa8.03□□□□□ -1.12
HDAC6-214ENST00000465269 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-214ENST00000465269 RAB37Q96AX2 223 aa8.01□□□□□ -1.13
HDAC6-214ENST00000465269 CBY1Q9Y3M2 126 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms