RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 RPL37AP8A6NKH3 93 aa6.52□□□□□ -1.37
MSH5-211ENST00000463144 NBDYA0A0U1RRE5 68 aa6.51□□□□□ -1.37
MSH5-211ENST00000463144 CNBPP62633 177 aaKnown RBP6.51□□□□□ -1.37
MSH5-211ENST00000463144 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.51□□□□□ -1.37
MSH5-211ENST00000463144 IGLV1-50A0A075B6I6 118 aa6.51□□□□□ -1.37
MSH5-211ENST00000463144 CCKP06307 115 aa6.51□□□□□ -1.37
MSH5-211ENST00000463144 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
MSH5-211ENST00000463144 FAM19A5Q7Z5A7 132 aaPredicted RBP6.5□□□□□ -1.37
MSH5-211ENST00000463144 A0A096LNI7 61 aa6.5□□□□□ -1.37
MSH5-211ENST00000463144 LRCOL1A6NCL2 159 aa6.5□□□□□ -1.37
MSH5-211ENST00000463144 Q6ZRN7 208 aaPredicted RBP6.5□□□□□ -1.37
MSH5-211ENST00000463144 LINC00846Q9NV44 126 aa6.5□□□□□ -1.37
MSH5-211ENST00000463144 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.49□□□□□ -1.37
MSH5-211ENST00000463144 Q6Q795 121 aa6.49□□□□□ -1.37
MSH5-211ENST00000463144 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
MSH5-211ENST00000463144 SPRR1AP35321 89 aa6.48□□□□□ -1.37
MSH5-211ENST00000463144 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
MSH5-211ENST00000463144 LAMTOR3Q9UHA4 124 aa6.48□□□□□ -1.37
MSH5-211ENST00000463144 TRBV7-7A0A0K0K1E9 115 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 C16orf90A8MZG2 172 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 B5MCH6 92 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 H3BQ85 93 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 PRYO14603 147 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
MSH5-211ENST00000463144 IGKV2-24A0A0C4DH68 120 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 Q6ZQT0 140 aa6.47□□□□□ -1.37
MSH5-211ENST00000463144 M0R2N4 97 aa6.46□□□□□ -1.37
MSH5-211ENST00000463144 C14orf177Q52M58 125 aa6.46□□□□□ -1.37
MSH5-211ENST00000463144 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
MSH5-211ENST00000463144 Q9BRP9 147 aa6.46□□□□□ -1.38
MSH5-211ENST00000463144 Q6ZRX8 168 aa6.45□□□□□ -1.38
MSH5-211ENST00000463144 NDUFV3P56181 108 aaKnown RBP6.45□□□□□ -1.38
MSH5-211ENST00000463144 CHTF8P0CG12 524 aa6.44□□□□□ -1.38
MSH5-211ENST00000463144 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
MSH5-211ENST00000463144 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 LINC01547P58512 204 aaPredicted RBP6.43□□□□□ -1.38
MSH5-211ENST00000463144 IMUPQ9GZP8 106 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 TRBV7-4A0A0J9YYF1 115 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 GHRHP01286 108 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 Q8N377 158 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 DNAH2Q9P225 4427 aa6.43□□□□□ -1.38
MSH5-211ENST00000463144 DSCR8Q96T75 97 aa6.42□□□□□ -1.38
MSH5-211ENST00000463144 DHRS4-AS1Q9P1J3 65 aa6.42□□□□□ -1.38
MSH5-211ENST00000463144 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
MSH5-211ENST00000463144 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
MSH5-211ENST00000463144 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
MSH5-211ENST00000463144 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
MSH5-211ENST00000463144 Q6JHZ5 121 aa6.41□□□□□ -1.38
MSH5-211ENST00000463144 ST20-AS1Q8NBB2 130 aa6.41□□□□□ -1.38
MSH5-211ENST00000463144 Q6ZR54 194 aa6.41□□□□□ -1.38
MSH5-211ENST00000463144 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
MSH5-211ENST00000463144 PANO1I0J062 215 aa6.4□□□□□ -1.38
MSH5-211ENST00000463144 PDE6GP18545 87 aa6.39□□□□□ -1.39
MSH5-211ENST00000463144 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
MSH5-211ENST00000463144 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
MSH5-211ENST00000463144 IGLV5-48A0A075B6I7 105 aa6.38□□□□□ -1.39
MSH5-211ENST00000463144 A0A087WTM6 91 aa6.38□□□□□ -1.39
MSH5-211ENST00000463144 UBE2BP63146 152 aa6.38□□□□□ -1.39
MSH5-211ENST00000463144 C3orf22Q8N5N4 141 aa6.38□□□□□ -1.39
MSH5-211ENST00000463144 FUSP35637 526 aaKnown RBP eCLIP6.38□□□□□ -1.39
MSH5-211ENST00000463144 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
MSH5-211ENST00000463144 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
MSH5-211ENST00000463144 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
MSH5-211ENST00000463144 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
MSH5-211ENST00000463144 TGP01266 2768 aa6.37□□□□□ -1.39
MSH5-211ENST00000463144 PRLHP81277 87 aa6.36□□□□□ -1.39
MSH5-211ENST00000463144 UBL5Q9BZL1 73 aa6.36□□□□□ -1.39
MSH5-211ENST00000463144 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
MSH5-211ENST00000463144 TNP2Q05952 138 aa6.35□□□□□ -1.39
MSH5-211ENST00000463144 Q6ZVQ6 151 aa6.35□□□□□ -1.39
MSH5-211ENST00000463144 WWC2-AS2Q96NR7 200 aa6.35□□□□□ -1.39
MSH5-211ENST00000463144 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
MSH5-211ENST00000463144 A0A087WVE0 104 aa6.34□□□□□ -1.39
MSH5-211ENST00000463144 HIST1H4AP62805 103 aaKnown RBP6.34□□□□□ -1.39
MSH5-211ENST00000463144 SMIM29Q86T20 159 aa6.34□□□□□ -1.39
MSH5-211ENST00000463144 LINC00474Q9P2X8 69 aa6.34□□□□□ -1.39
MSH5-211ENST00000463144 PKIGQ9Y2B9 76 aa6.34□□□□□ -1.39
MSH5-211ENST00000463144 SPACA4Q8TDM5 124 aa6.33□□□□□ -1.4
MSH5-211ENST00000463144 EPM2AB3EWF7 344 aa6.33□□□□□ -1.4
MSH5-211ENST00000463144 ATP5EP2Q5VTU8 51 aa6.33□□□□□ -1.4
MSH5-211ENST00000463144 LY6G6CO95867 125 aa6.32□□□□□ -1.4
MSH5-211ENST00000463144 RTL8CO15255 209 aa6.32□□□□□ -1.4
MSH5-211ENST00000463144 DPH3Q96FX2 82 aa6.32□□□□□ -1.4
MSH5-211ENST00000463144 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
MSH5-211ENST00000463144 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
MSH5-211ENST00000463144 HAMPP81172 84 aa6.31□□□□□ -1.4
MSH5-211ENST00000463144 C1orf134Q5TEV5 83 aa6.31□□□□□ -1.4
MSH5-211ENST00000463144 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
MSH5-211ENST00000463144 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
MSH5-211ENST00000463144 H0Y9J4 135 aa6.3□□□□□ -1.4
MSH5-211ENST00000463144 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
MSH5-211ENST00000463144 SRRM2Q9UQ35 2752 aaKnown RBP6.3□□□□□ -1.4
MSH5-211ENST00000463144 LINC00476Q8WZB0 136 aa6.29□□□□□ -1.4
MSH5-211ENST00000463144 C3orf84H3BNL1 204 aa6.29□□□□□ -1.4
MSH5-211ENST00000463144 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
MSH5-211ENST00000463144 HYDINQ4G0P3 5121 aa6.29□□□□□ -1.4
MSH5-211ENST00000463144 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
MSH5-211ENST00000463144 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms