RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 CFC1BP0CG36 223 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 CFC1P0CG37 223 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 UBE2AP49459 152 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 FAM19A1Q7Z5A9 133 aa6.25□□□□□ -1.41
UPF2-204ENST00000460569 NHP2Q9NX24 153 aaKnown RBP6.25□□□□□ -1.41
UPF2-204ENST00000460569 M0R143 59 aa6.24□□□□□ -1.41
UPF2-204ENST00000460569 ZNF73O43830 326 aaPredicted RBP6.24□□□□□ -1.41
UPF2-204ENST00000460569 SPRR1AP35321 89 aa6.24□□□□□ -1.41
UPF2-204ENST00000460569 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
UPF2-204ENST00000460569 BVES-AS1Q5T3Y7 98 aa6.24□□□□□ -1.41
UPF2-204ENST00000460569 DIRC1Q969H9 104 aa6.24□□□□□ -1.41
UPF2-204ENST00000460569 FAT1Q14517 4588 aa6.23□□□□□ -1.41
UPF2-204ENST00000460569 H7C2G1 150 aa6.23□□□□□ -1.41
UPF2-204ENST00000460569 RPL28P46779 137 aaKnown RBP6.23□□□□□ -1.41
UPF2-204ENST00000460569 PRLHP81277 87 aa6.23□□□□□ -1.41
UPF2-204ENST00000460569 KRTAP4-16G5E9R7 235 aaPredicted RBP6.22□□□□□ -1.41
UPF2-204ENST00000460569 K7ERJ3 54 aa6.22□□□□□ -1.41
UPF2-204ENST00000460569 C6orf99Q4VX62 202 aa6.22□□□□□ -1.41
UPF2-204ENST00000460569 SMIM11BQ8TCY0 68 aa6.22□□□□□ -1.41
UPF2-204ENST00000460569 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
UPF2-204ENST00000460569 ZNF861PO60384 105 aa6.21□□□□□ -1.42
UPF2-204ENST00000460569 Q1RN00 199 aa6.21□□□□□ -1.42
UPF2-204ENST00000460569 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
UPF2-204ENST00000460569 A0A1B0GWB2 263 aa6.2□□□□□ -1.42
UPF2-204ENST00000460569 B5MCH6 92 aa6.2□□□□□ -1.42
UPF2-204ENST00000460569 BATFQ16520 125 aa6.2□□□□□ -1.42
UPF2-204ENST00000460569 Q6ZRX8 168 aa6.2□□□□□ -1.42
UPF2-204ENST00000460569 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
UPF2-204ENST00000460569 HIGD2AQ9BW72 106 aa6.2□□□□□ -1.42
UPF2-204ENST00000460569 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
UPF2-204ENST00000460569 COX7BP24311 80 aa6.19□□□□□ -1.42
UPF2-204ENST00000460569 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
UPF2-204ENST00000460569 PCP4L1A6NKN8 68 aa6.18□□□□□ -1.42
UPF2-204ENST00000460569 H0Y9J4 135 aa6.18□□□□□ -1.42
UPF2-204ENST00000460569 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
UPF2-204ENST00000460569 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
UPF2-204ENST00000460569 HERC2O95714 4834 aa6.18□□□□□ -1.42
UPF2-204ENST00000460569 TRBV7-6A0A0J9YX20 115 aa6.17□□□□□ -1.42
UPF2-204ENST00000460569 VAMP3Q15836 100 aa6.17□□□□□ -1.42
UPF2-204ENST00000460569 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
UPF2-204ENST00000460569 TSPAN13O95857 204 aa6.16□□□□□ -1.42
UPF2-204ENST00000460569 SMCR5Q8TEV8 140 aa6.16□□□□□ -1.42
UPF2-204ENST00000460569 Q9BRP9 147 aa6.16□□□□□ -1.42
UPF2-204ENST00000460569 PSMB2P49721 201 aa6.15□□□□□ -1.42
UPF2-204ENST00000460569 TRIAP1O43715 76 aa6.14□□□□□ -1.43
UPF2-204ENST00000460569 ERC2-IT1O76042 136 aa6.14□□□□□ -1.43
UPF2-204ENST00000460569 DHRS4-AS1Q9P1J3 65 aa6.14□□□□□ -1.43
UPF2-204ENST00000460569 SLC25A20O43772 301 aa6.13□□□□□ -1.43
UPF2-204ENST00000460569 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
UPF2-204ENST00000460569 LINC00575Q6W349 94 aa6.12□□□□□ -1.43
UPF2-204ENST00000460569 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
UPF2-204ENST00000460569 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
UPF2-204ENST00000460569 H0YGX0 51 aa6.11□□□□□ -1.43
UPF2-204ENST00000460569 COX6CP09669 75 aa6.11□□□□□ -1.43
UPF2-204ENST00000460569 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
UPF2-204ENST00000460569 SPRR4Q96PI1 79 aa6.11□□□□□ -1.43
UPF2-204ENST00000460569 NAA38Q9BRA0 125 aaKnown RBP6.11□□□□□ -1.43
UPF2-204ENST00000460569 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
UPF2-204ENST00000460569 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
UPF2-204ENST00000460569 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
UPF2-204ENST00000460569 SCGB1C2P0DMR2 95 aa6.09□□□□□ -1.43
UPF2-204ENST00000460569 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
UPF2-204ENST00000460569 CLEC2BQ92478 149 aa6.09□□□□□ -1.43
UPF2-204ENST00000460569 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.43
UPF2-204ENST00000460569 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
UPF2-204ENST00000460569 SNCGO76070 127 aa6.08□□□□□ -1.44
UPF2-204ENST00000460569 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
UPF2-204ENST00000460569 H3BUT2 72 aa6.07□□□□□ -1.44
UPF2-204ENST00000460569 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
UPF2-204ENST00000460569 COL5A1-AS1Q5SY13 56 aa6.07□□□□□ -1.44
UPF2-204ENST00000460569 Q6ZQY7 126 aa6.07□□□□□ -1.44
UPF2-204ENST00000460569 DEFB105AQ8NG35 78 aa6.07□□□□□ -1.44
UPF2-204ENST00000460569 A0A1B0GX51 115 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 C9orf118A6NHY6 69 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 OXTP01178 125 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 FAM229BQ4G0N7 80 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.06□□□□□ -1.44
UPF2-204ENST00000460569 LINC01600Q96MT4 127 aa6.06□□□□□ -1.44
UPF2-204ENST00000460569 A0A087X002 238 aa6.05□□□□□ -1.44
UPF2-204ENST00000460569 DNAL4O96015 105 aa6.05□□□□□ -1.44
UPF2-204ENST00000460569 CRYGAP11844 174 aa6.05□□□□□ -1.44
UPF2-204ENST00000460569 PRR26Q8N8Z3 221 aa6.05□□□□□ -1.44
UPF2-204ENST00000460569 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
UPF2-204ENST00000460569 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
UPF2-204ENST00000460569 LST1O00453 97 aa6.04□□□□□ -1.44
UPF2-204ENST00000460569 SPRR1BP22528 89 aa6.04□□□□□ -1.44
UPF2-204ENST00000460569 A0A1W2PPM0 123 aa6.03□□□□□ -1.44
UPF2-204ENST00000460569 KRTAP29-1A8MX34 341 aaPredicted RBP6.03□□□□□ -1.44
UPF2-204ENST00000460569 LINC01547P58512 204 aaPredicted RBP6.03□□□□□ -1.44
UPF2-204ENST00000460569 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
UPF2-204ENST00000460569 IGLV9-49A0A0B4J1Y8 123 aa6.02□□□□□ -1.45
UPF2-204ENST00000460569 TCL1BO95988 128 aa6.02□□□□□ -1.45
UPF2-204ENST00000460569 TRACP01848 142 aa6.02□□□□□ -1.45
UPF2-204ENST00000460569 ATXN8Q156A1 80 aa6.02□□□□□ -1.45
UPF2-204ENST00000460569 KRTAP13-2Q52LG2 175 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms