RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 LITAFQ99732 161 aa6.53□□□□□ -1.36
UBR4-208ENST00000459947 ETDCA0A1B0GVM5 59 aa6.53□□□□□ -1.36
UBR4-208ENST00000459947 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
UBR4-208ENST00000459947 FAM19A1Q7Z5A9 133 aa6.53□□□□□ -1.36
UBR4-208ENST00000459947 SNHG12Q9BXW3 62 aa6.52□□□□□ -1.36
UBR4-208ENST00000459947 IGKV2-28A0A075B6P5 120 aa6.52□□□□□ -1.37
UBR4-208ENST00000459947 IGKV2D-28P01615 120 aa6.52□□□□□ -1.37
UBR4-208ENST00000459947 OCIAD2Q56VL3 154 aa6.51□□□□□ -1.37
UBR4-208ENST00000459947 DAND5Q8N907 189 aa6.51□□□□□ -1.37
UBR4-208ENST00000459947 SPRR1AP35321 89 aa6.51□□□□□ -1.37
UBR4-208ENST00000459947 ADAMTSL4-AS1Q5T5F5 129 aa6.51□□□□□ -1.37
UBR4-208ENST00000459947 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
UBR4-208ENST00000459947 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 COX8AP10176 69 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 FAM229BQ4G0N7 80 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 KRTAP13-1Q8IUC0 172 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
UBR4-208ENST00000459947 PKHD1L1Q86WI1 4243 aa6.49□□□□□ -1.37
UBR4-208ENST00000459947 TRAV13-2A0A0B4J235 113 aa6.49□□□□□ -1.37
UBR4-208ENST00000459947 SOSTDC1Q6X4U4 206 aa6.49□□□□□ -1.37
UBR4-208ENST00000459947 TRAV23DV6A0A075B6W5 121 aa6.49□□□□□ -1.37
UBR4-208ENST00000459947 Q8NDZ9 215 aa6.49□□□□□ -1.37
UBR4-208ENST00000459947 HIGD1BQ9P298 99 aa6.48□□□□□ -1.37
UBR4-208ENST00000459947 OR13C6PQ8NH95 151 aa6.48□□□□□ -1.37
UBR4-208ENST00000459947 TTTY13Q9BZ97 58 aa6.48□□□□□ -1.37
UBR4-208ENST00000459947 TRBV7-6A0A0J9YX20 115 aa6.47□□□□□ -1.37
UBR4-208ENST00000459947 SPATA45Q537H7 98 aa6.47□□□□□ -1.37
UBR4-208ENST00000459947 NPC2P61916 151 aa6.47□□□□□ -1.37
UBR4-208ENST00000459947 SLC25A34Q6PIV7 304 aa6.47□□□□□ -1.37
UBR4-208ENST00000459947 TAL2Q16559 108 aa6.46□□□□□ -1.37
UBR4-208ENST00000459947 ZNF73O43830 326 aaPredicted RBP6.46□□□□□ -1.38
UBR4-208ENST00000459947 CRYGAP11844 174 aa6.46□□□□□ -1.38
UBR4-208ENST00000459947 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
UBR4-208ENST00000459947 DHRS4-AS1Q9P1J3 65 aa6.45□□□□□ -1.38
UBR4-208ENST00000459947 B5MCH6 92 aa6.45□□□□□ -1.38
UBR4-208ENST00000459947 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 PRLHP81277 87 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 Q6ZRX8 168 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 HIGD2AQ9BW72 106 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 KRTAP4-16G5E9R7 235 aaPredicted RBP6.44□□□□□ -1.38
UBR4-208ENST00000459947 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
UBR4-208ENST00000459947 UQCR10Q9UDW1 63 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 FAT1Q14517 4588 aa6.44□□□□□ -1.38
UBR4-208ENST00000459947 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
UBR4-208ENST00000459947 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
UBR4-208ENST00000459947 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
UBR4-208ENST00000459947 A6NDN8 102 aa6.42□□□□□ -1.38
UBR4-208ENST00000459947 COX7BP24311 80 aa6.42□□□□□ -1.38
UBR4-208ENST00000459947 C5orf47Q569G3 176 aa6.41□□□□□ -1.38
UBR4-208ENST00000459947 SMCR5Q8TEV8 140 aa6.41□□□□□ -1.38
UBR4-208ENST00000459947 SPRR4Q96PI1 79 aa6.41□□□□□ -1.38
UBR4-208ENST00000459947 FLG2Q5D862 2391 aaPredicted RBP6.41□□□□□ -1.38
UBR4-208ENST00000459947 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.39
UBR4-208ENST00000459947 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
UBR4-208ENST00000459947 SNCGO76070 127 aa6.39□□□□□ -1.39
UBR4-208ENST00000459947 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
UBR4-208ENST00000459947 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
UBR4-208ENST00000459947 ABCA13Q86UQ4 5058 aa6.38□□□□□ -1.39
UBR4-208ENST00000459947 SLC25A20O43772 301 aa6.38□□□□□ -1.39
UBR4-208ENST00000459947 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
UBR4-208ENST00000459947 SPAG11AQ6PDA7 123 aa6.38□□□□□ -1.39
UBR4-208ENST00000459947 HSD52Q0P140 79 aa6.37□□□□□ -1.39
UBR4-208ENST00000459947 C6orf99Q4VX62 202 aa6.37□□□□□ -1.39
UBR4-208ENST00000459947 RAB37Q96AX2 223 aa6.37□□□□□ -1.39
UBR4-208ENST00000459947 A0A0B4J2C4 111 aa6.37□□□□□ -1.39
UBR4-208ENST00000459947 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
UBR4-208ENST00000459947 BVES-AS1Q5T3Y7 98 aa6.36□□□□□ -1.39
UBR4-208ENST00000459947 FABP2P12104 132 aa6.36□□□□□ -1.39
UBR4-208ENST00000459947 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
UBR4-208ENST00000459947 CEND1Q8N111 149 aa6.35□□□□□ -1.39
UBR4-208ENST00000459947 SSBP3-AS1Q7Z2R9 100 aa6.35□□□□□ -1.39
UBR4-208ENST00000459947 GHRHP01286 108 aa6.34□□□□□ -1.39
UBR4-208ENST00000459947 SPRR1BP22528 89 aa6.34□□□□□ -1.39
UBR4-208ENST00000459947 C2orf91Q6ZV80 131 aa6.34□□□□□ -1.39
UBR4-208ENST00000459947 NAA38Q9BRA0 125 aaKnown RBP6.34□□□□□ -1.39
UBR4-208ENST00000459947 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
UBR4-208ENST00000459947 Q9BRP9 147 aa6.34□□□□□ -1.39
UBR4-208ENST00000459947 SMIM11BQ8TCY0 68 aa6.34□□□□□ -1.39
UBR4-208ENST00000459947 DMBT1Q9UGM3 2413 aaPredicted RBP6.34□□□□□ -1.4
UBR4-208ENST00000459947 C4orf48Q5BLP8 95 aa6.33□□□□□ -1.4
UBR4-208ENST00000459947 LAMTOR3Q9UHA4 124 aa6.33□□□□□ -1.4
UBR4-208ENST00000459947 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
UBR4-208ENST00000459947 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
UBR4-208ENST00000459947 H0YGX0 51 aa6.32□□□□□ -1.4
UBR4-208ENST00000459947 PPDPFLQ8WWR9 84 aa6.32□□□□□ -1.4
UBR4-208ENST00000459947 SPCS1Q9Y6A9 102 aa6.32□□□□□ -1.4
UBR4-208ENST00000459947 A0A087X002 238 aa6.31□□□□□ -1.4
UBR4-208ENST00000459947 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
UBR4-208ENST00000459947 A0A1B0GX51 115 aa6.3□□□□□ -1.4
UBR4-208ENST00000459947 H3BUT2 72 aa6.3□□□□□ -1.4
UBR4-208ENST00000459947 Q8NBF4 154 aa6.3□□□□□ -1.4
UBR4-208ENST00000459947 V9GYY9 64 aa6.3□□□□□ -1.4
UBR4-208ENST00000459947 PRO1854Q9UHT4 67 aa6.3□□□□□ -1.4
UBR4-208ENST00000459947 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms