RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LCA10Q71F78 164 aa6.82□□□□□ -1.32
UFD1-205ENST00000459854 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
UFD1-205ENST00000459854 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
UFD1-205ENST00000459854 MAST4O15021 2626 aa6.81□□□□□ -1.32
UFD1-205ENST00000459854 LINC00315P59091 139 aa6.81□□□□□ -1.32
UFD1-205ENST00000459854 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
UFD1-205ENST00000459854 IGHV3OR16-9A0A0B4J2B5 98 aa6.81□□□□□ -1.32
UFD1-205ENST00000459854 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
UFD1-205ENST00000459854 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
UFD1-205ENST00000459854 Q8NBF4 154 aa6.8□□□□□ -1.32
UFD1-205ENST00000459854 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
UFD1-205ENST00000459854 NOTCH3Q9UM47 2321 aa6.8□□□□□ -1.32
UFD1-205ENST00000459854 TM2D3Q9BRN9 247 aa6.79□□□□□ -1.32
UFD1-205ENST00000459854 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
UFD1-205ENST00000459854 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
UFD1-205ENST00000459854 KLK9Q2XQG4 91 aa6.78□□□□□ -1.32
UFD1-205ENST00000459854 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
UFD1-205ENST00000459854 ASH1LQ9NR48 2969 aaKnown RBP6.78□□□□□ -1.32
UFD1-205ENST00000459854 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
UFD1-205ENST00000459854 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.32
UFD1-205ENST00000459854 KIAA0087Q14695 138 aa6.77□□□□□ -1.32
UFD1-205ENST00000459854 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.32
UFD1-205ENST00000459854 FHL3Q13643 280 aa6.77□□□□□ -1.33
UFD1-205ENST00000459854 Q6ZSN1 163 aa6.76□□□□□ -1.33
UFD1-205ENST00000459854 LITAFQ99732 161 aa6.76□□□□□ -1.33
UFD1-205ENST00000459854 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
UFD1-205ENST00000459854 IGLV1-51P01701 117 aa6.76□□□□□ -1.33
UFD1-205ENST00000459854 LINC01600Q96MT4 127 aa6.76□□□□□ -1.33
UFD1-205ENST00000459854 TET2Q6N021 2002 aaPredicted RBP6.76□□□□□ -1.33
UFD1-205ENST00000459854 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
UFD1-205ENST00000459854 MOBPQ13875 183 aa6.75□□□□□ -1.33
UFD1-205ENST00000459854 TRBV7-4A0A0J9YYF1 115 aa6.75□□□□□ -1.33
UFD1-205ENST00000459854 A8MUN3 132 aa6.74□□□□□ -1.33
UFD1-205ENST00000459854 H7BZZ5 65 aa6.74□□□□□ -1.33
UFD1-205ENST00000459854 HRNRQ86YZ3 2850 aaPredicted RBP6.74□□□□□ -1.33
UFD1-205ENST00000459854 ATRQ13535 2644 aa6.74□□□□□ -1.33
UFD1-205ENST00000459854 MAP1AP78559 2803 aaPredicted RBP6.74□□□□□ -1.33
UFD1-205ENST00000459854 UQCR11O14957 56 aa6.73□□□□□ -1.33
UFD1-205ENST00000459854 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
UFD1-205ENST00000459854 RELNP78509 3460 aa6.73□□□□□ -1.33
UFD1-205ENST00000459854 CELSR2Q9HCU4 2923 aa6.73□□□□□ -1.33
UFD1-205ENST00000459854 SETXQ7Z333 2677 aaKnown RBP6.73□□□□□ -1.33
UFD1-205ENST00000459854 LRBAP50851 2863 aa6.72□□□□□ -1.33
UFD1-205ENST00000459854 MDFIQ99750 246 aa6.72□□□□□ -1.33
UFD1-205ENST00000459854 COA5Q86WW8 74 aa6.72□□□□□ -1.33
UFD1-205ENST00000459854 TEX15Q9BXT5 2789 aa6.72□□□□□ -1.33
UFD1-205ENST00000459854 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.33
UFD1-205ENST00000459854 Q9UF83 564 aa6.71□□□□□ -1.33
UFD1-205ENST00000459854 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.33
UFD1-205ENST00000459854 Q6ZRU5 148 aa6.71□□□□□ -1.34
UFD1-205ENST00000459854 BSNQ9UPA5 3926 aa6.71□□□□□ -1.34
UFD1-205ENST00000459854 KRTAP10-3P60369 221 aa6.71□□□□□ -1.34
UFD1-205ENST00000459854 C22orf24Q9Y442 160 aa6.7□□□□□ -1.34
UFD1-205ENST00000459854 A8MTW9 85 aa6.7□□□□□ -1.34
UFD1-205ENST00000459854 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
UFD1-205ENST00000459854 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
UFD1-205ENST00000459854 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
UFD1-205ENST00000459854 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
UFD1-205ENST00000459854 SPINK1P00995 79 aa6.69□□□□□ -1.34
UFD1-205ENST00000459854 Q6ZRX8 168 aa6.69□□□□□ -1.34
UFD1-205ENST00000459854 CRYBG3Q68DQ2 2970 aa6.69□□□□□ -1.34
UFD1-205ENST00000459854 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
UFD1-205ENST00000459854 AGRNO00468 2067 aa6.68□□□□□ -1.34
UFD1-205ENST00000459854 KRTAP21-3Q3LHN1 58 aa6.68□□□□□ -1.34
UFD1-205ENST00000459854 TACC2O95359 2948 aa6.67□□□□□ -1.34
UFD1-205ENST00000459854 FBN2P35556 2912 aa6.67□□□□□ -1.34
UFD1-205ENST00000459854 A8MWP4 228 aa6.67□□□□□ -1.34
UFD1-205ENST00000459854 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
UFD1-205ENST00000459854 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
UFD1-205ENST00000459854 H3BNG1 76 aa6.67□□□□□ -1.34
UFD1-205ENST00000459854 EDN2P20800 178 aa6.66□□□□□ -1.34
UFD1-205ENST00000459854 Q1T7F1 81 aa6.66□□□□□ -1.34
UFD1-205ENST00000459854 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
UFD1-205ENST00000459854 SORL1Q92673 2214 aa6.65□□□□□ -1.34
UFD1-205ENST00000459854 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.35
UFD1-205ENST00000459854 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.35
UFD1-205ENST00000459854 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
UFD1-205ENST00000459854 DCHS2Q6V1P9 2916 aa6.64□□□□□ -1.35
UFD1-205ENST00000459854 PDZD2O15018 2839 aa6.64□□□□□ -1.35
UFD1-205ENST00000459854 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
UFD1-205ENST00000459854 LINC00167Q96N53 147 aa6.64□□□□□ -1.35
UFD1-205ENST00000459854 NUPR2A6NF83 97 aa6.63□□□□□ -1.35
UFD1-205ENST00000459854 X6R8D5 127 aa6.63□□□□□ -1.35
UFD1-205ENST00000459854 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
UFD1-205ENST00000459854 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
UFD1-205ENST00000459854 PRLHP81277 87 aa6.62□□□□□ -1.35
UFD1-205ENST00000459854 Q6ZRP5 223 aa6.61□□□□□ -1.35
UFD1-205ENST00000459854 COL6A5A8TX70 2615 aa6.6□□□□□ -1.35
UFD1-205ENST00000459854 MRPL34Q9BQ48 92 aaKnown RBP6.6□□□□□ -1.35
UFD1-205ENST00000459854 K7EQZ3 153 aa6.58□□□□□ -1.36
UFD1-205ENST00000459854 OBSCN-AS1Q96MR7 158 aa6.58□□□□□ -1.36
UFD1-205ENST00000459854 LINC00313P59037 77 aa6.58□□□□□ -1.36
UFD1-205ENST00000459854 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
UFD1-205ENST00000459854 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
UFD1-205ENST00000459854 ZANQ9Y493 2812 aa6.57□□□□□ -1.36
UFD1-205ENST00000459854 LINC00528Q8N1L1 170 aa6.56□□□□□ -1.36
UFD1-205ENST00000459854 IGLV5-52A0A0A0MRZ9 124 aa6.56□□□□□ -1.36
UFD1-205ENST00000459854 STAB1Q9NY15 2570 aa6.56□□□□□ -1.36
UFD1-205ENST00000459854 RPL37AP61513 92 aaKnown RBP6.56□□□□□ -1.36
UFD1-205ENST00000459854 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms