RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
PDGFB-204ENST00000455790 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
PDGFB-204ENST00000455790 SYS1-DBNDD2H3BUS1 97 aa6.73□□□□□ -1.33
PDGFB-204ENST00000455790 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
PDGFB-204ENST00000455790 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
PDGFB-204ENST00000455790 LITAFQ99732 161 aa6.73□□□□□ -1.33
PDGFB-204ENST00000455790 ZNF73O43830 326 aaPredicted RBP6.72□□□□□ -1.33
PDGFB-204ENST00000455790 SPINK1P00995 79 aa6.72□□□□□ -1.33
PDGFB-204ENST00000455790 ST20-AS1Q8NBB2 130 aa6.72□□□□□ -1.33
PDGFB-204ENST00000455790 LINC01545Q5VT33 79 aa6.71□□□□□ -1.34
PDGFB-204ENST00000455790 TTTY13Q9BZ97 58 aa6.71□□□□□ -1.34
PDGFB-204ENST00000455790 Q8N377 158 aa6.7□□□□□ -1.34
PDGFB-204ENST00000455790 LINC00308Q8TCZ7 52 aa6.7□□□□□ -1.34
PDGFB-204ENST00000455790 SSBP3-AS1Q7Z2R9 100 aa6.69□□□□□ -1.34
PDGFB-204ENST00000455790 JOSD1Q15040 202 aaPredicted RBP6.68□□□□□ -1.34
PDGFB-204ENST00000455790 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
PDGFB-204ENST00000455790 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
PDGFB-204ENST00000455790 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
PDGFB-204ENST00000455790 TIMM17BO60830 172 aa6.67□□□□□ -1.34
PDGFB-204ENST00000455790 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
PDGFB-204ENST00000455790 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
PDGFB-204ENST00000455790 PET117Q6UWS5 81 aa6.67□□□□□ -1.34
PDGFB-204ENST00000455790 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
PDGFB-204ENST00000455790 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
PDGFB-204ENST00000455790 KRTDAPP60985 99 aa6.64□□□□□ -1.35
PDGFB-204ENST00000455790 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
PDGFB-204ENST00000455790 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
PDGFB-204ENST00000455790 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
PDGFB-204ENST00000455790 SLC25A20O43772 301 aa6.63□□□□□ -1.35
PDGFB-204ENST00000455790 COA6Q5JTJ3 125 aaKnown RBP6.63□□□□□ -1.35
PDGFB-204ENST00000455790 SPRR1BP22528 89 aa6.62□□□□□ -1.35
PDGFB-204ENST00000455790 HINT1P49773 126 aaPredicted RBP6.62□□□□□ -1.35
PDGFB-204ENST00000455790 ANKRD39Q53RE8 183 aa6.62□□□□□ -1.35
PDGFB-204ENST00000455790 CBY1Q9Y3M2 126 aa6.62□□□□□ -1.35
PDGFB-204ENST00000455790 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
PDGFB-204ENST00000455790 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
PDGFB-204ENST00000455790 C6orf99Q4VX62 202 aa6.61□□□□□ -1.35
PDGFB-204ENST00000455790 ATOH7Q8N100 152 aa6.61□□□□□ -1.35
PDGFB-204ENST00000455790 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
PDGFB-204ENST00000455790 COX7BP24311 80 aa6.6□□□□□ -1.35
PDGFB-204ENST00000455790 HRCT1Q6UXD1 115 aa6.6□□□□□ -1.35
PDGFB-204ENST00000455790 XP32Q5T750 250 aa6.59□□□□□ -1.35
PDGFB-204ENST00000455790 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
PDGFB-204ENST00000455790 SEC61BP60468 96 aaKnown RBP6.58□□□□□ -1.36
PDGFB-204ENST00000455790 Q1RN00 199 aa6.58□□□□□ -1.36
PDGFB-204ENST00000455790 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
PDGFB-204ENST00000455790 LINC00518Q8N0U6 118 aa6.58□□□□□ -1.36
PDGFB-204ENST00000455790 DEFB105AQ8NG35 78 aa6.57□□□□□ -1.36
PDGFB-204ENST00000455790 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
PDGFB-204ENST00000455790 C20orf202A1L168 122 aa6.56□□□□□ -1.36
PDGFB-204ENST00000455790 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
PDGFB-204ENST00000455790 A0A0G2JQZ4 141 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 A6NDN8 102 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 IFITM1P13164 125 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 LINC01547P58512 204 aaPredicted RBP6.54□□□□□ -1.36
PDGFB-204ENST00000455790 TAL2Q16559 108 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 MUSTN1Q8IVN3 82 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 LIMD2Q9BT23 127 aa6.54□□□□□ -1.36
PDGFB-204ENST00000455790 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
PDGFB-204ENST00000455790 H7C2G1 150 aa6.53□□□□□ -1.36
PDGFB-204ENST00000455790 IGLV5-48A0A075B6I7 105 aa6.52□□□□□ -1.37
PDGFB-204ENST00000455790 TEX49A0A1B0GTD5 131 aa6.52□□□□□ -1.37
PDGFB-204ENST00000455790 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
PDGFB-204ENST00000455790 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
PDGFB-204ENST00000455790 Q6ZVH6 145 aa6.51□□□□□ -1.37
PDGFB-204ENST00000455790 COPS9Q8WXC6 57 aa6.51□□□□□ -1.37
PDGFB-204ENST00000455790 PRO1933Q9H354 126 aa6.51□□□□□ -1.37
PDGFB-204ENST00000455790 CD164Q04900 197 aa6.5□□□□□ -1.37
PDGFB-204ENST00000455790 SMIM11BQ8TCY0 68 aa6.5□□□□□ -1.37
PDGFB-204ENST00000455790 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
PDGFB-204ENST00000455790 PCOTHQ58A44 107 aa6.48□□□□□ -1.37
PDGFB-204ENST00000455790 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
PDGFB-204ENST00000455790 HIST1H2BLQ99880 126 aa6.48□□□□□ -1.37
PDGFB-204ENST00000455790 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
PDGFB-204ENST00000455790 AKR1D1P51857 326 aa6.47□□□□□ -1.37
PDGFB-204ENST00000455790 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
PDGFB-204ENST00000455790 C1orf195Q5TG92 126 aa6.46□□□□□ -1.38
PDGFB-204ENST00000455790 Q5XG85 94 aa6.46□□□□□ -1.38
PDGFB-204ENST00000455790 A4D1N5 150 aa6.45□□□□□ -1.38
PDGFB-204ENST00000455790 SNRPEP62304 92 aaKnown RBP6.45□□□□□ -1.38
PDGFB-204ENST00000455790 IGLV8-61A0A075B6I0 122 aa6.44□□□□□ -1.38
PDGFB-204ENST00000455790 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
PDGFB-204ENST00000455790 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
PDGFB-204ENST00000455790 S100A2P29034 98 aa6.43□□□□□ -1.38
PDGFB-204ENST00000455790 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
PDGFB-204ENST00000455790 HSBP1L1C9JCN9 74 aa6.41□□□□□ -1.38
PDGFB-204ENST00000455790 Q6ZQY7 126 aa6.41□□□□□ -1.38
PDGFB-204ENST00000455790 C12orf57Q99622 126 aa6.41□□□□□ -1.38
PDGFB-204ENST00000455790 F8WEM9 126 aa6.39□□□□□ -1.39
PDGFB-204ENST00000455790 MT1HP80294 61 aa6.39□□□□□ -1.39
PDGFB-204ENST00000455790 hADV29S1A0JD25 119 aa6.38□□□□□ -1.39
PDGFB-204ENST00000455790 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms