RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 SPRR1BP22528 89 aa6.9□□□□□ -1.3
PTPA-224ENST00000453358 LEPROTO15243 131 aa6.89□□□□□ -1.31
PTPA-224ENST00000453358 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
PTPA-224ENST00000453358 CHCHD1Q96BP2 118 aaKnown RBP6.89□□□□□ -1.31
PTPA-224ENST00000453358 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
PTPA-224ENST00000453358 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
PTPA-224ENST00000453358 C10orf91Q5T1B1 145 aa6.88□□□□□ -1.31
PTPA-224ENST00000453358 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
PTPA-224ENST00000453358 IFITM2Q01629 132 aa6.87□□□□□ -1.31
PTPA-224ENST00000453358 SLC25A34Q6PIV7 304 aa6.87□□□□□ -1.31
PTPA-224ENST00000453358 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
PTPA-224ENST00000453358 J3QQQ9 107 aa6.86□□□□□ -1.31
PTPA-224ENST00000453358 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
PTPA-224ENST00000453358 RPL37P61927 97 aaKnown RBP6.86□□□□□ -1.31
PTPA-224ENST00000453358 LAMTOR3Q9UHA4 124 aa6.86□□□□□ -1.31
PTPA-224ENST00000453358 CD164Q04900 197 aa6.85□□□□□ -1.31
PTPA-224ENST00000453358 COMMD7Q86VX2 200 aa6.85□□□□□ -1.31
PTPA-224ENST00000453358 CBY1Q9Y3M2 126 aa6.85□□□□□ -1.31
PTPA-224ENST00000453358 H0Y8G0 127 aa6.84□□□□□ -1.31
PTPA-224ENST00000453358 NMUP48645 174 aa6.84□□□□□ -1.31
PTPA-224ENST00000453358 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
PTPA-224ENST00000453358 NPC2P61916 151 aa6.84□□□□□ -1.31
PTPA-224ENST00000453358 H7C2G1 150 aa6.83□□□□□ -1.32
PTPA-224ENST00000453358 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
PTPA-224ENST00000453358 C1orf195Q5TG92 126 aa6.82□□□□□ -1.32
PTPA-224ENST00000453358 Q5XG85 94 aa6.82□□□□□ -1.32
PTPA-224ENST00000453358 DHRS4-AS1Q9P1J3 65 aa6.82□□□□□ -1.32
PTPA-224ENST00000453358 HSBP1O75506 76 aa6.81□□□□□ -1.32
PTPA-224ENST00000453358 LGALS3P17931 250 aaKnown RBP6.81□□□□□ -1.32
PTPA-224ENST00000453358 PLNP26678 52 aa6.81□□□□□ -1.32
PTPA-224ENST00000453358 PRO1933Q9H354 126 aa6.81□□□□□ -1.32
PTPA-224ENST00000453358 HERVK_113P61574 105 aa6.8□□□□□ -1.32
PTPA-224ENST00000453358 Q1RN00 199 aa6.8□□□□□ -1.32
PTPA-224ENST00000453358 A0A0J9YXY3 114 aa6.79□□□□□ -1.32
PTPA-224ENST00000453358 DPM2O94777 84 aa6.78□□□□□ -1.32
PTPA-224ENST00000453358 OR13C6PQ8NH95 151 aa6.78□□□□□ -1.32
PTPA-224ENST00000453358 PMCHL2Q9BQD1 86 aa6.78□□□□□ -1.32
PTPA-224ENST00000453358 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
PTPA-224ENST00000453358 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
PTPA-224ENST00000453358 ELOF1P60002 83 aaKnown RBP6.77□□□□□ -1.33
PTPA-224ENST00000453358 TAL2Q16559 108 aa6.77□□□□□ -1.33
PTPA-224ENST00000453358 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
PTPA-224ENST00000453358 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
PTPA-224ENST00000453358 YPEL4Q96NS1 127 aa6.77□□□□□ -1.33
PTPA-224ENST00000453358 TEX49A0A1B0GTD5 131 aa6.76□□□□□ -1.33
PTPA-224ENST00000453358 COX7BP24311 80 aa6.76□□□□□ -1.33
PTPA-224ENST00000453358 AKR1D1P51857 326 aa6.76□□□□□ -1.33
PTPA-224ENST00000453358 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
PTPA-224ENST00000453358 A0A0G2JQZ4 141 aa6.75□□□□□ -1.33
PTPA-224ENST00000453358 IGKCP01834 107 aa6.75□□□□□ -1.33
PTPA-224ENST00000453358 LINC00310P59036 64 aa6.75□□□□□ -1.33
PTPA-224ENST00000453358 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
PTPA-224ENST00000453358 SPANXDQ9BXN6 97 aa6.75□□□□□ -1.33
PTPA-224ENST00000453358 APOC3P02656 99 aa6.74□□□□□ -1.33
PTPA-224ENST00000453358 C6orf99Q4VX62 202 aa6.74□□□□□ -1.33
PTPA-224ENST00000453358 LITAFQ99732 161 aa6.74□□□□□ -1.33
PTPA-224ENST00000453358 E9PLD3 99 aa6.72□□□□□ -1.33
PTPA-224ENST00000453358 SERF1AO75920 110 aa6.72□□□□□ -1.33
PTPA-224ENST00000453358 SNAPINO95295 136 aa6.72□□□□□ -1.33
PTPA-224ENST00000453358 Q6Q795 121 aa6.72□□□□□ -1.33
PTPA-224ENST00000453358 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
PTPA-224ENST00000453358 IGLV5-48A0A075B6I7 105 aa6.71□□□□□ -1.34
PTPA-224ENST00000453358 CFC1P0CG37 223 aa6.71□□□□□ -1.34
PTPA-224ENST00000453358 FABP4P15090 132 aa6.71□□□□□ -1.34
PTPA-224ENST00000453358 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
PTPA-224ENST00000453358 TIMM17BO60830 172 aa6.7□□□□□ -1.34
PTPA-224ENST00000453358 SVBPQ8N300 66 aa6.7□□□□□ -1.34
PTPA-224ENST00000453358 TCL1BO95988 128 aa6.69□□□□□ -1.34
PTPA-224ENST00000453358 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
PTPA-224ENST00000453358 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
PTPA-224ENST00000453358 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
PTPA-224ENST00000453358 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
PTPA-224ENST00000453358 TRGC2P03986 189 aa6.67□□□□□ -1.34
PTPA-224ENST00000453358 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
PTPA-224ENST00000453358 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
PTPA-224ENST00000453358 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.34
PTPA-224ENST00000453358 ATP11AUNQ6ZP68 121 aa6.65□□□□□ -1.34
PTPA-224ENST00000453358 Q75L30 129 aa6.65□□□□□ -1.34
PTPA-224ENST00000453358 ZNF815PA8K554 130 aa6.63□□□□□ -1.35
PTPA-224ENST00000453358 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
PTPA-224ENST00000453358 OBSCN-AS1Q96MR7 158 aa6.63□□□□□ -1.35
PTPA-224ENST00000453358 TTTY13Q9BZ97 58 aa6.62□□□□□ -1.35
PTPA-224ENST00000453358 C20orf202A1L168 122 aa6.6□□□□□ -1.35
PTPA-224ENST00000453358 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
PTPA-224ENST00000453358 A4D1N5 150 aa6.59□□□□□ -1.35
PTPA-224ENST00000453358 SYS1-DBNDD2H3BUS1 97 aa6.59□□□□□ -1.35
PTPA-224ENST00000453358 TRBV7-7A0A0K0K1E9 115 aa6.58□□□□□ -1.36
PTPA-224ENST00000453358 A6NDN8 102 aa6.58□□□□□ -1.36
PTPA-224ENST00000453358 F8WEM9 126 aa6.58□□□□□ -1.36
PTPA-224ENST00000453358 MT2AP02795 61 aa6.58□□□□□ -1.36
PTPA-224ENST00000453358 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
PTPA-224ENST00000453358 NHP2Q9NX24 153 aaKnown RBP6.58□□□□□ -1.36
PTPA-224ENST00000453358 LCE2BO14633 110 aa6.57□□□□□ -1.36
PTPA-224ENST00000453358 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
PTPA-224ENST00000453358 Q6JHZ5 121 aa6.55□□□□□ -1.36
PTPA-224ENST00000453358 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
PTPA-224ENST00000453358 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
PTPA-224ENST00000453358 IFITM1P13164 125 aa6.54□□□□□ -1.36
PTPA-224ENST00000453358 IGFL1Q6UW32 110 aa6.54□□□□□ -1.36
PTPA-224ENST00000453358 SMIM11BQ8TCY0 68 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms