RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 K7EQZ3 153 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 SERF2P84101 59 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 USMG5Q96IX5 58 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 NMES1Q9C002 83 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 CMC2Q9NRP2 79 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 CRIPTQ9P021 101 aa0.92□□□□□ -2.26
TRGVB-201ENST00000453257 IGIPA6NJ69 53 aa0.91□□□□□ -2.26
TRGVB-201ENST00000453257 MRPL33O75394 65 aaKnown RBP0.91□□□□□ -2.26
TRGVB-201ENST00000453257 SPINK9Q5DT21 86 aa0.91□□□□□ -2.26
TRGVB-201ENST00000453257 TOGARAM1Q9Y4F4 1720 aa0.91□□□□□ -2.26
TRGVB-201ENST00000453257 ROS1P08922 2347 aa0.9□□□□□ -2.26
TRGVB-201ENST00000453257 ANKRD17O75179 2603 aaKnown RBP0.9□□□□□ -2.26
TRGVB-201ENST00000453257 I3L3M4 83 aa0.9□□□□□ -2.27
TRGVB-201ENST00000453257 M0R1W7 72 aa0.9□□□□□ -2.27
TRGVB-201ENST00000453257 PRH1P02810 166 aa0.9□□□□□ -2.27
TRGVB-201ENST00000453257 TOMM5Q8N4H5 51 aa0.9□□□□□ -2.27
TRGVB-201ENST00000453257 MRPL34Q9BQ48 92 aaKnown RBP0.9□□□□□ -2.27
TRGVB-201ENST00000453257 C4AP0C0L4 1744 aa0.89□□□□□ -2.27
TRGVB-201ENST00000453257 C4BP0C0L5 1744 aa0.89□□□□□ -2.27
TRGVB-201ENST00000453257 ASXL3Q9C0F0 2248 aa0.89□□□□□ -2.27
TRGVB-201ENST00000453257 PLNP26678 52 aa0.89□□□□□ -2.27
TRGVB-201ENST00000453257 COX6B2Q6YFQ2 88 aa0.89□□□□□ -2.27
TRGVB-201ENST00000453257 CCL22O00626 93 aa0.88□□□□□ -2.27
TRGVB-201ENST00000453257 COX6B1P14854 86 aa0.88□□□□□ -2.27
TRGVB-201ENST00000453257 COX6A2Q02221 97 aa0.88□□□□□ -2.27
TRGVB-201ENST00000453257 DEPDC5O75140 1603 aa0.87□□□□□ -2.27
TRGVB-201ENST00000453257 A0A0D9SG42 100 aa0.87□□□□□ -2.27
TRGVB-201ENST00000453257 Q8IZM0 81 aa0.87□□□□□ -2.27
TRGVB-201ENST00000453257 PRO0255Q9UI72 69 aa0.87□□□□□ -2.27
TRGVB-201ENST00000453257 IQGAP1P46940 1657 aa0.87□□□□□ -2.27
TRGVB-201ENST00000453257 GPR98Q8WXG9 6306 aa0.87□□□□□ -2.27
TRGVB-201ENST00000453257 ZDBF2Q9HCK1 2354 aa0.86□□□□□ -2.27
TRGVB-201ENST00000453257 TRPM2O94759 1503 aa0.86□□□□□ -2.27
TRGVB-201ENST00000453257 CRIP1P50238 77 aa0.86□□□□□ -2.27
TRGVB-201ENST00000453257 Q5VSD8 79 aa0.86□□□□□ -2.27
TRGVB-201ENST00000453257 ABRACLQ9P1F3 81 aa0.86□□□□□ -2.27
TRGVB-201ENST00000453257 ATP7AQ04656 1500 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 SMIM27A0A1W2PRY6 76 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 LINC01546A6NGU7 62 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 CDKN2A-AS1Q9UH64 79 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 JMJD1CQ15652 2540 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 TNCP24821 2201 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 FAM208BQ5VWN6 2430 aa0.85□□□□□ -2.27
TRGVB-201ENST00000453257 NAV3Q8IVL0 2385 aa0.84□□□□□ -2.27
TRGVB-201ENST00000453257 DDX60Q8IY21 1712 aaKnown RBP0.84□□□□□ -2.27
TRGVB-201ENST00000453257 KNTC1P50748 2209 aa0.84□□□□□ -2.27
TRGVB-201ENST00000453257 URB1O60287 2271 aaKnown RBP0.84□□□□□ -2.27
TRGVB-201ENST00000453257 NDUFA3O95167 84 aa0.84□□□□□ -2.27
TRGVB-201ENST00000453257 CDC42BPAQ5VT25 1732 aa0.84□□□□□ -2.28
TRGVB-201ENST00000453257 LYNX1G3V0Z9 82 aa0.83□□□□□ -2.28
TRGVB-201ENST00000453257 H0YGX0 51 aa0.83□□□□□ -2.28
TRGVB-201ENST00000453257 SPRR1AP35321 89 aa0.83□□□□□ -2.28
TRGVB-201ENST00000453257 PRO3102Q9H379 93 aa0.83□□□□□ -2.28
TRGVB-201ENST00000453257 NFAT5O94916 1531 aa0.83□□□□□ -2.28
TRGVB-201ENST00000453257 LMO7Q8WWI1 1683 aa0.82□□□□□ -2.28
TRGVB-201ENST00000453257 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
TRGVB-201ENST00000453257 H0YAA0 97 aa0.82□□□□□ -2.28
TRGVB-201ENST00000453257 LINC00158P58513 81 aa0.82□□□□□ -2.28
TRGVB-201ENST00000453257 AHCTF1Q8WYP5 2266 aa0.81□□□□□ -2.28
TRGVB-201ENST00000453257 LELP1Q5T871 98 aa0.81□□□□□ -2.28
TRGVB-201ENST00000453257 SAMD9LQ8IVG5 1584 aa0.8□□□□□ -2.28
TRGVB-201ENST00000453257 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
TRGVB-201ENST00000453257 LOC730098B7Z3J9 87 aa0.8□□□□□ -2.28
TRGVB-201ENST00000453257 H1FX-AS1Q4G0G2 97 aa0.8□□□□□ -2.28
TRGVB-201ENST00000453257 DEFB105AQ8NG35 78 aa0.8□□□□□ -2.28
TRGVB-201ENST00000453257 PIEZO2Q9H5I5 2752 aa0.79□□□□□ -2.28
TRGVB-201ENST00000453257 SPRR1BP22528 89 aa0.79□□□□□ -2.28
TRGVB-201ENST00000453257 TMEM167BQ9NRX6 74 aa0.79□□□□□ -2.28
TRGVB-201ENST00000453257 APLNQ9ULZ1 77 aa0.79□□□□□ -2.28
TRGVB-201ENST00000453257 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.79□□□□□ -2.28
TRGVB-201ENST00000453257 GOLGA4Q13439 2230 aaKnown RBP0.79□□□□□ -2.28
TRGVB-201ENST00000453257 BPTFQ12830 3046 aa0.78□□□□□ -2.28
TRGVB-201ENST00000453257 LINC00308Q8TCZ7 52 aa0.78□□□□□ -2.28
TRGVB-201ENST00000453257 KIF21BO75037 1637 aa0.78□□□□□ -2.29
TRGVB-201ENST00000453257 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.29
TRGVB-201ENST00000453257 MINOS1Q5TGZ0 78 aa0.77□□□□□ -2.29
TRGVB-201ENST00000453257 WFDC13Q8IUB5 93 aa0.77□□□□□ -2.29
TRGVB-201ENST00000453257 CNOT1A5YKK6 2376 aaKnown RBP0.77□□□□□ -2.29
TRGVB-201ENST00000453257 SPINK4O60575 86 aa0.76□□□□□ -2.29
TRGVB-201ENST00000453257 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
TRGVB-201ENST00000453257 TIMM8BQ9Y5J9 83 aaPredicted RBP0.76□□□□□ -2.29
TRGVB-201ENST00000453257 IAPPP10997 89 aa0.75□□□□□ -2.29
TRGVB-201ENST00000453257 ZNF469Q96JG9 3925 aaPredicted RBP0.74□□□□□ -2.29
TRGVB-201ENST00000453257 DUOX1Q9NRD9 1551 aa0.74□□□□□ -2.29
TRGVB-201ENST00000453257 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
TRGVB-201ENST00000453257 DEFB130BP0DP73 79 aa0.73□□□□□ -2.29
TRGVB-201ENST00000453257 DEFB130AP0DP74 79 aa0.73□□□□□ -2.29
TRGVB-201ENST00000453257 RPS27P42677 84 aaKnown RBP0.73□□□□□ -2.29
TRGVB-201ENST00000453257 KLK9Q2XQG4 91 aa0.73□□□□□ -2.29
TRGVB-201ENST00000453257 RPS27LQ71UM5 84 aaKnown RBP0.73□□□□□ -2.29
TRGVB-201ENST00000453257 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
TRGVB-201ENST00000453257 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
TRGVB-201ENST00000453257 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
TRGVB-201ENST00000453257 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
TRGVB-201ENST00000453257 PTPRQQ9UMZ3 2332 aa0.71□□□□□ -2.3
TRGVB-201ENST00000453257 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
TRGVB-201ENST00000453257 USF3Q68DE3 2245 aa0.71□□□□□ -2.3
TRGVB-201ENST00000453257 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
TRGVB-201ENST00000453257 SMIM2Q9BVW6 85 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms