RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TAX1BP3O14907 124 aa7.59□□□□□ -1.19
CHD3-206ENST00000452447 GTF2H5Q6ZYL4 71 aa7.59□□□□□ -1.19
CHD3-206ENST00000452447 MTURNQ8N3F0 131 aa7.59□□□□□ -1.19
CHD3-206ENST00000452447 J3QQQ9 107 aa7.59□□□□□ -1.2
CHD3-206ENST00000452447 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.2
CHD3-206ENST00000452447 M0R378 163 aa7.58□□□□□ -1.2
CHD3-206ENST00000452447 Q8NDZ9 215 aa7.58□□□□□ -1.2
CHD3-206ENST00000452447 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
CHD3-206ENST00000452447 HERV-K104P63124 156 aa7.57□□□□□ -1.2
CHD3-206ENST00000452447 MEIG1Q5JSS6 88 aa7.57□□□□□ -1.2
CHD3-206ENST00000452447 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
CHD3-206ENST00000452447 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
CHD3-206ENST00000452447 KRTAP13-2Q52LG2 175 aa7.55□□□□□ -1.2
CHD3-206ENST00000452447 BVES-AS1Q5T3Y7 98 aa7.55□□□□□ -1.2
CHD3-206ENST00000452447 NDUFA12Q9UI09 145 aa7.55□□□□□ -1.2
CHD3-206ENST00000452447 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 COX8AP10176 69 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
CHD3-206ENST00000452447 SLC25A34Q6PIV7 304 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 MIR7-3HGQ8N6C7 128 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
CHD3-206ENST00000452447 MUC2Q02817 5179 aa7.53□□□□□ -1.2
CHD3-206ENST00000452447 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
CHD3-206ENST00000452447 SIGMAR1Q99720 223 aa7.52□□□□□ -1.21
CHD3-206ENST00000452447 NCR3O14931 201 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 A6NDN8 102 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 C9orf118A6NHY6 69 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 J3QR89 54 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 K7EP34 96 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 PRYO14603 147 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 Q6ZVH6 145 aa7.5□□□□□ -1.21
CHD3-206ENST00000452447 TSPEAR-AS2P59090 65 aa7.49□□□□□ -1.21
CHD3-206ENST00000452447 PCP2Q8IVA1 136 aa7.49□□□□□ -1.21
CHD3-206ENST00000452447 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
CHD3-206ENST00000452447 TIMM17BO60830 172 aa7.48□□□□□ -1.21
CHD3-206ENST00000452447 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
CHD3-206ENST00000452447 LINC00337Q8N6G1 96 aa7.48□□□□□ -1.21
CHD3-206ENST00000452447 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
CHD3-206ENST00000452447 RETNLBQ9BQ08 111 aa7.48□□□□□ -1.21
CHD3-206ENST00000452447 KCNQ1DNQ9H478 68 aa7.48□□□□□ -1.21
CHD3-206ENST00000452447 ETDCA0A1B0GVM5 59 aa7.47□□□□□ -1.21
CHD3-206ENST00000452447 A0A0J9YXY3 114 aa7.46□□□□□ -1.21
CHD3-206ENST00000452447 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.21
CHD3-206ENST00000452447 SPRR1AP35321 89 aa7.46□□□□□ -1.21
CHD3-206ENST00000452447 DAND5Q8N907 189 aa7.46□□□□□ -1.21
CHD3-206ENST00000452447 HIGD1BQ9P298 99 aa7.46□□□□□ -1.21
CHD3-206ENST00000452447 HSD52Q0P140 79 aa7.46□□□□□ -1.22
CHD3-206ENST00000452447 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
CHD3-206ENST00000452447 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
CHD3-206ENST00000452447 C4orf48Q5BLP8 95 aa7.45□□□□□ -1.22
CHD3-206ENST00000452447 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
CHD3-206ENST00000452447 LOC107984156A0A0G2JMH3 177 aa7.44□□□□□ -1.22
CHD3-206ENST00000452447 TAL2Q16559 108 aa7.44□□□□□ -1.22
CHD3-206ENST00000452447 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
CHD3-206ENST00000452447 ARL17AQ8IVW1 177 aa7.44□□□□□ -1.22
CHD3-206ENST00000452447 TTTY13Q9BZ97 58 aa7.44□□□□□ -1.22
CHD3-206ENST00000452447 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
CHD3-206ENST00000452447 TRBV10-2A0A0K0K1G8 114 aa7.43□□□□□ -1.22
CHD3-206ENST00000452447 KRTAP4-16G5E9R7 235 aaPredicted RBP7.43□□□□□ -1.22
CHD3-206ENST00000452447 IFITM1P13164 125 aa7.43□□□□□ -1.22
CHD3-206ENST00000452447 HIST1H4GQ99525 98 aa7.43□□□□□ -1.22
CHD3-206ENST00000452447 IGLV7-46A0A075B6I9 117 aa7.42□□□□□ -1.22
CHD3-206ENST00000452447 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
CHD3-206ENST00000452447 PPDPFQ9H3Y8 114 aa7.42□□□□□ -1.22
CHD3-206ENST00000452447 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
CHD3-206ENST00000452447 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
CHD3-206ENST00000452447 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
CHD3-206ENST00000452447 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
CHD3-206ENST00000452447 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
CHD3-206ENST00000452447 B5MCH6 92 aa7.4□□□□□ -1.22
CHD3-206ENST00000452447 NDUFC2O95298 119 aa7.4□□□□□ -1.22
CHD3-206ENST00000452447 FABP2P12104 132 aa7.4□□□□□ -1.22
CHD3-206ENST00000452447 TPRXLQ17RH7 258 aa7.4□□□□□ -1.22
CHD3-206ENST00000452447 GAGE2AQ6NT46 116 aa7.4□□□□□ -1.22
CHD3-206ENST00000452447 F8W1H4 67 aa7.39□□□□□ -1.23
CHD3-206ENST00000452447 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
CHD3-206ENST00000452447 Q8NBF4 154 aa7.39□□□□□ -1.23
CHD3-206ENST00000452447 NPC2P61916 151 aa7.38□□□□□ -1.23
CHD3-206ENST00000452447 SPCS1Q9Y6A9 102 aa7.38□□□□□ -1.23
CHD3-206ENST00000452447 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
CHD3-206ENST00000452447 IGLV6-57P01721 117 aa7.37□□□□□ -1.23
CHD3-206ENST00000452447 LINC00483Q53H64 154 aa7.37□□□□□ -1.23
CHD3-206ENST00000452447 Q6ZRX8 168 aa7.37□□□□□ -1.23
CHD3-206ENST00000452447 LITAFQ99732 161 aa7.37□□□□□ -1.23
CHD3-206ENST00000452447 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
CHD3-206ENST00000452447 LINC00308Q8TCZ7 52 aa7.37□□□□□ -1.23
CHD3-206ENST00000452447 TRAV23DV6A0A075B6W5 121 aa7.36□□□□□ -1.23
CHD3-206ENST00000452447 H3BUT2 72 aa7.36□□□□□ -1.23
CHD3-206ENST00000452447 ERC2-IT1O76042 136 aa7.36□□□□□ -1.23
CHD3-206ENST00000452447 SPINK1P00995 79 aa7.36□□□□□ -1.23
CHD3-206ENST00000452447 CEND1Q8N111 149 aa7.36□□□□□ -1.23
CHD3-206ENST00000452447 Q9BRP9 147 aa7.36□□□□□ -1.23
CHD3-206ENST00000452447 IGLV9-49A0A0B4J1Y8 123 aa7.35□□□□□ -1.23
CHD3-206ENST00000452447 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
CHD3-206ENST00000452447 FP248Q71RG6 208 aaPredicted RBP7.35□□□□□ -1.23
CHD3-206ENST00000452447 MOBPQ13875 183 aa7.34□□□□□ -1.23
CHD3-206ENST00000452447 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms